RNA–Protein interactions for RNA: ENST00000236192.11

VAMP4-201, Transcript of vesicle associated membrane protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VAMP4, Length 5,159 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-201ENST00000236192 CEBPGP53567 150 aa12.43□□□□□ -0.42
VAMP4-201ENST00000236192 EN1Q05925 392 aaPredicted RBP12.43□□□□□ -0.42
VAMP4-201ENST00000236192 TRAM2Q15035 370 aa12.43□□□□□ -0.42
VAMP4-201ENST00000236192 MTSS1LQ765P7 747 aa12.43□□□□□ -0.42
VAMP4-201ENST00000236192 UNC93AQ86WB7 457 aa12.43□□□□□ -0.42
VAMP4-201ENST00000236192 CLDN22Q8N7P3 220 aa12.43□□□□□ -0.42
VAMP4-201ENST00000236192 APOLD1Q96LR9 279 aa12.43□□□□□ -0.42
VAMP4-201ENST00000236192 SLC38A3Q99624 504 aa12.43□□□□□ -0.42
VAMP4-201ENST00000236192 MARK1Q9P0L2 795 aa12.43□□□□□ -0.42
VAMP4-201ENST00000236192 ADAM10O14672 748 aa12.43□□□□□ -0.42
VAMP4-201ENST00000236192 TLX2O43763 284 aaPredicted RBP12.43□□□□□ -0.42
VAMP4-201ENST00000236192 RPP40O75818 363 aaKnown RBP12.43□□□□□ -0.42
VAMP4-201ENST00000236192 ODC1P11926 461 aa12.43□□□□□ -0.42
VAMP4-201ENST00000236192 RPS2P15880 293 aaKnown RBP12.43□□□□□ -0.42
VAMP4-201ENST00000236192 RAB4AP20338 218 aa12.43□□□□□ -0.42
VAMP4-201ENST00000236192 TNFRSF17Q02223 184 aa12.43□□□□□ -0.42
VAMP4-201ENST00000236192 HHIPL2Q6UWX4 724 aa12.43□□□□□ -0.42
VAMP4-201ENST00000236192 SH2D5Q6ZV89 423 aa12.43□□□□□ -0.42
VAMP4-201ENST00000236192 ELP4Q96EB1 424 aa12.43□□□□□ -0.42
VAMP4-201ENST00000236192 ABCG4Q9H172 646 aa12.43□□□□□ -0.42
VAMP4-201ENST00000236192 EXO5Q9H790 373 aa12.43□□□□□ -0.42
VAMP4-201ENST00000236192 PSORS1C1Q9UIG5 152 aa12.43□□□□□ -0.42
VAMP4-201ENST00000236192 FZD10Q9ULW2 581 aa12.43□□□□□ -0.42
VAMP4-201ENST00000236192 SIGLEC6O43699 453 aa12.43□□□□□ -0.42
VAMP4-201ENST00000236192 TSPAN3O60637 253 aa12.43□□□□□ -0.42
VAMP4-201ENST00000236192 SMIM6P0DI80 62 aa12.43□□□□□ -0.42
VAMP4-201ENST00000236192 RHCEP18577 417 aa12.43□□□□□ -0.42
VAMP4-201ENST00000236192 DRD5P21918 477 aa12.43□□□□□ -0.42
VAMP4-201ENST00000236192 RNF4P78317 190 aa12.43□□□□□ -0.42
VAMP4-201ENST00000236192 MFSD10Q14728 455 aa12.43□□□□□ -0.42
VAMP4-201ENST00000236192 DCAF4L1Q3SXM0 396 aa12.43□□□□□ -0.42
VAMP4-201ENST00000236192 ZNF484Q5JVG2 852 aa12.43□□□□□ -0.42
VAMP4-201ENST00000236192 LETMD1Q6P1Q0 360 aa12.43□□□□□ -0.42
VAMP4-201ENST00000236192 C2CD4AQ8NCU7 369 aaPredicted RBP12.43□□□□□ -0.42
VAMP4-201ENST00000236192 B3GNT7Q8NFL0 401 aa12.43□□□□□ -0.42
VAMP4-201ENST00000236192 OR1J4Q8NGS1 313 aa12.43□□□□□ -0.42
VAMP4-201ENST00000236192 ACOT11Q8WXI4 607 aaPredicted RBP12.43□□□□□ -0.42
VAMP4-201ENST00000236192 A0A0G2JMP0 313 aa12.42□□□□□ -0.42
VAMP4-201ENST00000236192 HK1P19367 917 aa12.42□□□□□ -0.42
VAMP4-201ENST00000236192 APLP1P51693 650 aa12.42□□□□□ -0.42
VAMP4-201ENST00000236192 MAP2K6P52564 334 aa12.42□□□□□ -0.42
VAMP4-201ENST00000236192 NKX6-1P78426 367 aaPredicted RBP12.42□□□□□ -0.42
VAMP4-201ENST00000236192 TNFAIP1Q13829 316 aa12.42□□□□□ -0.42
VAMP4-201ENST00000236192 RAB33AQ14088 237 aa12.42□□□□□ -0.42
VAMP4-201ENST00000236192 PCBP1Q15365 356 aaKnown RBP eCLIP12.42□□□□□ -0.426e-6■□□□□ 9.5
VAMP4-201ENST00000236192 TMEM135Q86UB9 458 aa12.42□□□□□ -0.42
VAMP4-201ENST00000236192 RDH10Q8IZV5 341 aa12.42□□□□□ -0.42
VAMP4-201ENST00000236192 OR4M2Q8NGB6 313 aa12.42□□□□□ -0.42
VAMP4-201ENST00000236192 SFXN2Q96NB2 322 aa12.42□□□□□ -0.42
VAMP4-201ENST00000236192 PEBP4Q96S96 227 aa12.42□□□□□ -0.42
VAMP4-201ENST00000236192 DCAF13Q9NV06 445 aaKnown RBP12.42□□□□□ -0.42
VAMP4-201ENST00000236192 DZANK1Q9NVP4 752 aa12.42□□□□□ -0.42
VAMP4-201ENST00000236192 GTF2A1LQ9UNN4 478 aa12.42□□□□□ -0.42
VAMP4-201ENST00000236192 C5orf51A6NDU8 294 aa12.42□□□□□ -0.42
VAMP4-201ENST00000236192 PRH1P02810 166 aa12.42□□□□□ -0.42
VAMP4-201ENST00000236192 CD53P19397 219 aa12.42□□□□□ -0.42
VAMP4-201ENST00000236192 CDH5P33151 784 aaPredicted RBP12.42□□□□□ -0.42
VAMP4-201ENST00000236192 CLDN20P56880 219 aa12.42□□□□□ -0.42
VAMP4-201ENST00000236192 POLR2GP62487 172 aaKnown RBP eCLIP12.42□□□□□ -0.42
VAMP4-201ENST00000236192 SPANXN4Q5MJ08 99 aa12.42□□□□□ -0.42
VAMP4-201ENST00000236192 CCDC190Q86UF4 302 aa12.42□□□□□ -0.42
VAMP4-201ENST00000236192 PELI3Q8N2H9 469 aa12.42□□□□□ -0.42
VAMP4-201ENST00000236192 FBXL18Q96ME1 805 aa12.42□□□□□ -0.42
VAMP4-201ENST00000236192 OR2A14Q96R47 310 aa12.42□□□□□ -0.42
VAMP4-201ENST00000236192 ELOVL4Q9GZR5 314 aa12.42□□□□□ -0.42
VAMP4-201ENST00000236192 SMPD4Q9NXE4 827 aa12.42□□□□□ -0.42
VAMP4-201ENST00000236192 NDRG2Q9UN36 371 aaKnown RBP12.42□□□□□ -0.42
VAMP4-201ENST00000236192 ZFR2Q9UPR6 939 aaKnown RBP12.42□□□□□ -0.42
VAMP4-201ENST00000236192 PTGDR2Q9Y5Y4 395 aa12.42□□□□□ -0.42
VAMP4-201ENST00000236192 NAGAP17050 411 aa12.42□□□□□ -0.42
VAMP4-201ENST00000236192 CYP2B6P20813 491 aa12.42□□□□□ -0.42
VAMP4-201ENST00000236192 PTBP1P26599 531 aaKnown RBP eCLIP12.42□□□□□ -0.42
VAMP4-201ENST00000236192 EPHA5P54756 1037 aa12.42□□□□□ -0.42
VAMP4-201ENST00000236192 LAMTOR4Q0VGL1 99 aa12.42□□□□□ -0.42
VAMP4-201ENST00000236192 CDNFQ49AH0 187 aa12.42□□□□□ -0.42
VAMP4-201ENST00000236192 SAXO2Q658L1 398 aa12.42□□□□□ -0.42
VAMP4-201ENST00000236192 SFRP4Q6FHJ7 346 aaPredicted RBP12.42□□□□□ -0.42
VAMP4-201ENST00000236192 EFCAB12Q6NXP0 572 aa12.42□□□□□ -0.42
VAMP4-201ENST00000236192 TMEM65Q6PI78 240 aa12.42□□□□□ -0.42
VAMP4-201ENST00000236192 FAM220AQ7Z4H9 259 aa12.42□□□□□ -0.42
VAMP4-201ENST00000236192 DAW1Q8N136 415 aa12.42□□□□□ -0.42
VAMP4-201ENST00000236192 C18orf25Q96B23 403 aaPredicted RBP12.42□□□□□ -0.42
VAMP4-201ENST00000236192 L3HYPDHQ96EM0 354 aa12.42□□□□□ -0.42
VAMP4-201ENST00000236192 MBOAT4Q96T53 435 aa12.42□□□□□ -0.42
VAMP4-201ENST00000236192 GPR21Q99679 349 aa12.42□□□□□ -0.42
VAMP4-201ENST00000236192 TMEM175Q9BSA9 504 aa12.42□□□□□ -0.42
VAMP4-201ENST00000236192 MYEF2Q9P2K5 600 aaKnown RBP12.42□□□□□ -0.42
VAMP4-201ENST00000236192 DIMT1Q9UNQ2 313 aaKnown RBP12.42□□□□□ -0.42
VAMP4-201ENST00000236192 GMFGO60234 142 aa12.42□□□□□ -0.42
VAMP4-201ENST00000236192 BMP7P18075 431 aa12.42□□□□□ -0.42
VAMP4-201ENST00000236192 S100A11P31949 105 aa12.42□□□□□ -0.42
VAMP4-201ENST00000236192 TGFBR1P36897 503 aa12.42□□□□□ -0.42
VAMP4-201ENST00000236192 PPIGQ13427 754 aaKnown RBP eCLIP12.42□□□□□ -0.42
VAMP4-201ENST00000236192 FAM69AQ5T7M9 428 aa12.42□□□□□ -0.42
VAMP4-201ENST00000236192 LRP10Q7Z4F1 713 aa12.42□□□□□ -0.42
VAMP4-201ENST00000236192 BEST3Q8N1M1 668 aa12.42□□□□□ -0.42
VAMP4-201ENST00000236192 TCEANCQ8N8B7 351 aa12.42□□□□□ -0.42
VAMP4-201ENST00000236192 ZDHHC1Q8WTX9 485 aa12.42□□□□□ -0.42
VAMP4-201ENST00000236192 SLC29A3Q9BZD2 475 aa12.42□□□□□ -0.42
VAMP4-201ENST00000236192 POLR1EQ9GZS1 481 aaKnown RBP12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms