RNA–Protein interactions for RNA: ENST00000222402.7

UBE2D4-201, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE2D4, Length 3,974 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-201ENST00000222402 HCN4Q9Y3Q4 1203 aa14.35□□□□□ -0.11
UBE2D4-201ENST00000222402 TSC22D4Q9Y3Q8 395 aa14.35□□□□□ -0.11
UBE2D4-201ENST00000222402 AREL1O15033 823 aa14.34□□□□□ -0.11
UBE2D4-201ENST00000222402 EPHA2P29317 976 aa14.34□□□□□ -0.11
UBE2D4-201ENST00000222402 CLK3P49761 638 aaKnown RBP14.34□□□□□ -0.11
UBE2D4-201ENST00000222402 KHDRBS1Q07666 443 aaKnown RBP eCLIP14.34□□□□□ -0.11
UBE2D4-201ENST00000222402 CCDC85BQ15834 202 aaPredicted RBP14.34□□□□□ -0.11
UBE2D4-201ENST00000222402 NXPE4Q6UWF7 544 aa14.34□□□□□ -0.11
UBE2D4-201ENST00000222402 ZNF740Q8NDX6 193 aa14.34□□□□□ -0.11
UBE2D4-201ENST00000222402 F2RL3Q96RI0 385 aa14.34□□□□□ -0.11
UBE2D4-201ENST00000222402 FAIM2Q9BWQ8 316 aa14.34□□□□□ -0.11
UBE2D4-201ENST00000222402 BHLHE41Q9C0J9 482 aaPredicted RBP14.34□□□□□ -0.11
UBE2D4-201ENST00000222402 GPR83Q9NYM4 423 aa14.34□□□□□ -0.11
UBE2D4-201ENST00000222402 CDH7Q9ULB5 785 aa14.34□□□□□ -0.11
UBE2D4-201ENST00000222402 GPSM3Q9Y4H4 160 aa14.34□□□□□ -0.11
UBE2D4-201ENST00000222402 F5P12259 2224 aa14.34□□□□□ -0.11
UBE2D4-201ENST00000222402 H0YIV9 168 aa14.34□□□□□ -0.11
UBE2D4-201ENST00000222402 ATP6V1G1O75348 118 aa14.34□□□□□ -0.11
UBE2D4-201ENST00000222402 SLCO2B1O94956 709 aa14.34□□□□□ -0.11
UBE2D4-201ENST00000222402 KRT8P05787 483 aa14.34□□□□□ -0.11
UBE2D4-201ENST00000222402 SRPRAP08240 638 aaKnown RBP14.34□□□□□ -0.11
UBE2D4-201ENST00000222402 CCR2P41597 374 aa14.34□□□□□ -0.11
UBE2D4-201ENST00000222402 GSTM5P46439 218 aa14.34□□□□□ -0.11
UBE2D4-201ENST00000222402 RFX3P48380 749 aa14.34□□□□□ -0.11
UBE2D4-201ENST00000222402 RPS3AP61247 264 aaKnown RBP14.34□□□□□ -0.11
UBE2D4-201ENST00000222402 IQCCQ4KMZ1 466 aa14.34□□□□□ -0.11
UBE2D4-201ENST00000222402 ZC3H12BQ5HYM0 836 aaKnown RBP14.34□□□□□ -0.11
UBE2D4-201ENST00000222402 DCDC5Q6ZRR9 648 aa14.34□□□□□ -0.11
UBE2D4-201ENST00000222402 PRSS48Q7RTY5 328 aa14.34□□□□□ -0.11
UBE2D4-201ENST00000222402 C12orf76Q8N812 135 aaPredicted RBP14.34□□□□□ -0.11
UBE2D4-201ENST00000222402 ZFP90Q8TF47 636 aa14.34□□□□□ -0.11
UBE2D4-201ENST00000222402 ZNF689Q96CS4 500 aaPredicted RBP14.34□□□□□ -0.11
UBE2D4-201ENST00000222402 ECHDC3Q96DC8 303 aa14.34□□□□□ -0.11
UBE2D4-201ENST00000222402 LRIG1Q96JA1 1093 aa14.34□□□□□ -0.11
UBE2D4-201ENST00000222402 Q96MT0 163 aa14.34□□□□□ -0.11
UBE2D4-201ENST00000222402 TEFMQ96QE5 360 aaKnown RBP14.34□□□□□ -0.11
UBE2D4-201ENST00000222402 ZCCHC3Q9NUD5 404 aaKnown RBP14.34□□□□□ -0.11
UBE2D4-201ENST00000222402 NINQ8N4C6 2090 aa14.34□□□□□ -0.11
UBE2D4-201ENST00000222402 JRKO75564 520 aa14.34□□□□□ -0.11
UBE2D4-201ENST00000222402 ACP5P13686 325 aa14.34□□□□□ -0.11
UBE2D4-201ENST00000222402 EPCAMP16422 314 aa14.34□□□□□ -0.11
UBE2D4-201ENST00000222402 IDSP22304 550 aa14.34□□□□□ -0.11
UBE2D4-201ENST00000222402 PRLHRP49683 370 aa14.34□□□□□ -0.11
UBE2D4-201ENST00000222402 MTSS1LQ765P7 747 aa14.34□□□□□ -0.11
UBE2D4-201ENST00000222402 GET4Q7L5D6 327 aaPredicted RBP14.34□□□□□ -0.11
UBE2D4-201ENST00000222402 ANKRD13BQ86YJ7 626 aa14.34□□□□□ -0.11
UBE2D4-201ENST00000222402 ARMC8Q8IUR7 673 aa14.34□□□□□ -0.11
UBE2D4-201ENST00000222402 PHF6Q8IWS0 365 aaKnown RBP eCLIP14.34□□□□□ -0.11
UBE2D4-201ENST00000222402 OR52N2Q8NGI0 321 aa14.34□□□□□ -0.11
UBE2D4-201ENST00000222402 SLC38A4Q969I6 547 aa14.34□□□□□ -0.11
UBE2D4-201ENST00000222402 SH3YL1Q96HL8 342 aaPredicted RBP14.34□□□□□ -0.11
UBE2D4-201ENST00000222402 C12orf66Q96MD2 445 aa14.34□□□□□ -0.11
UBE2D4-201ENST00000222402 ZBP1Q9H171 429 aa14.34□□□□□ -0.11
UBE2D4-201ENST00000222402 EHD1Q9H4M9 534 aa14.34□□□□□ -0.11
UBE2D4-201ENST00000222402 IGFLR1Q9H665 355 aa14.34□□□□□ -0.11
UBE2D4-201ENST00000222402 MS4A12Q9NXJ0 267 aa14.34□□□□□ -0.11
UBE2D4-201ENST00000222402 H2AFY2Q9P0M6 372 aaPredicted RBP14.34□□□□□ -0.11
UBE2D4-201ENST00000222402 ETHE1O95571 254 aa14.33□□□□□ -0.11
UBE2D4-201ENST00000222402 OLFM2O95897 454 aa14.33□□□□□ -0.11
UBE2D4-201ENST00000222402 PSMA3P25788 255 aa14.33□□□□□ -0.11
UBE2D4-201ENST00000222402 ERVFC1P60507 584 aa14.33□□□□□ -0.11
UBE2D4-201ENST00000222402 ZNF33BQ06732 778 aa14.33□□□□□ -0.11
UBE2D4-201ENST00000222402 TARDBPQ13148 414 aaKnown RBP eCLIP14.33□□□□□ -0.11
UBE2D4-201ENST00000222402 FADDQ13158 208 aa14.33□□□□□ -0.11
UBE2D4-201ENST00000222402 GAB1Q13480 694 aa14.33□□□□□ -0.11
UBE2D4-201ENST00000222402 NCF4Q15080 339 aa14.33□□□□□ -0.11
UBE2D4-201ENST00000222402 FAM46CQ5VWP2 391 aa14.33□□□□□ -0.11
UBE2D4-201ENST00000222402 REEP3Q6NUK4 255 aa14.33□□□□□ -0.11
UBE2D4-201ENST00000222402 ZNF551Q7Z340 670 aaPredicted RBP14.33□□□□□ -0.11
UBE2D4-201ENST00000222402 ZBED6CLQ96FA7 236 aaPredicted RBP14.33□□□□□ -0.11
UBE2D4-201ENST00000222402 POLR2J3Q9H1A7 115 aaKnown RBP14.33□□□□□ -0.11
UBE2D4-201ENST00000222402 PALMDQ9NP74 551 aa14.33□□□□□ -0.11
UBE2D4-201ENST00000222402 NECTIN3Q9NQS3 549 aa14.33□□□□□ -0.11
UBE2D4-201ENST00000222402 PCDHGA10Q9Y5H3 936 aa14.33□□□□□ -0.11
UBE2D4-201ENST00000222402 MYOFQ9NZM1 2061 aa14.33□□□□□ -0.11
UBE2D4-201ENST00000222402 C1orf105O95561 183 aa14.33□□□□□ -0.12
UBE2D4-201ENST00000222402 ALOX5P09917 674 aa14.33□□□□□ -0.12
UBE2D4-201ENST00000222402 MYL12AP19105 171 aa14.33□□□□□ -0.12
UBE2D4-201ENST00000222402 PCGF2P35227 344 aa14.33□□□□□ -0.12
UBE2D4-201ENST00000222402 RBBP4Q09028 425 aa14.33□□□□□ -0.12
UBE2D4-201ENST00000222402 UAP1L1Q3KQV9 507 aa14.33□□□□□ -0.12
UBE2D4-201ENST00000222402 ZNF404Q494X3 552 aa14.33□□□□□ -0.12
UBE2D4-201ENST00000222402 C9orf64Q5T6V5 341 aa14.33□□□□□ -0.12
UBE2D4-201ENST00000222402 FAM43BQ6ZT52 329 aaPredicted RBP14.33□□□□□ -0.12
UBE2D4-201ENST00000222402 CELF5Q8N6W0 485 aaKnown RBP14.33□□□□□ -0.12
UBE2D4-201ENST00000222402 FAR1Q8WVX9 515 aa14.33□□□□□ -0.12
UBE2D4-201ENST00000222402 OTUB2Q96DC9 234 aa14.33□□□□□ -0.12
UBE2D4-201ENST00000222402 RHNO1Q9BSD3 238 aa14.33□□□□□ -0.12
UBE2D4-201ENST00000222402 SPATA9Q9BWV2 254 aa14.33□□□□□ -0.12
UBE2D4-201ENST00000222402 TMEM121BQ9BXQ6 578 aaPredicted RBP14.33□□□□□ -0.12
UBE2D4-201ENST00000222402 CERS4Q9HA82 394 aa14.33□□□□□ -0.12
UBE2D4-201ENST00000222402 DMRT3Q9NQL9 472 aa14.33□□□□□ -0.12
UBE2D4-201ENST00000222402 PSIP1O75475 530 aaKnown RBP14.33□□□□□ -0.12
UBE2D4-201ENST00000222402 VEGFBP49765 207 aa14.33□□□□□ -0.12
UBE2D4-201ENST00000222402 SMIM11AP58511 58 aa14.33□□□□□ -0.12
UBE2D4-201ENST00000222402 CTBSQ01459 385 aa14.33□□□□□ -0.12
UBE2D4-201ENST00000222402 FPGSQ05932 587 aa14.33□□□□□ -0.12
UBE2D4-201ENST00000222402 SLC5A12Q1EHB4 618 aa14.33□□□□□ -0.12
UBE2D4-201ENST00000222402 COX20Q5RI15 118 aa14.33□□□□□ -0.12
UBE2D4-201ENST00000222402 ARMC4Q5T2S8 1044 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms