RNA–Protein interactions for RNA: ENST00000035307.6

CHPF2-201, Transcript of chondroitin polymerizing factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHPF2, Length 3,978 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPF2-201ENST00000035307 OAS3Q9Y6K5 1087 aaKnown RBP11.6□□□□□ -0.55
CHPF2-201ENST00000035307 APC2O95996 2303 aa11.6□□□□□ -0.55
CHPF2-201ENST00000035307 PRAMEF33A0A0G2JMD5 474 aa11.59□□□□□ -0.55
CHPF2-201ENST00000035307 TRBC2A0A5B9 178 aa11.59□□□□□ -0.55
CHPF2-201ENST00000035307 TMCC2O75069 709 aa11.59□□□□□ -0.55
CHPF2-201ENST00000035307 SERPINB7O75635 380 aa11.59□□□□□ -0.55
CHPF2-201ENST00000035307 RPS17P08708 135 aaKnown RBP11.59□□□□□ -0.55
CHPF2-201ENST00000035307 MTHFD2P13995 350 aa11.59□□□□□ -0.55
CHPF2-201ENST00000035307 HK3P52790 923 aa11.59□□□□□ -0.55
CHPF2-201ENST00000035307 MLLT1Q03111 559 aaPredicted RBP11.59□□□□□ -0.55
CHPF2-201ENST00000035307 PMS2P3Q13401 168 aa11.59□□□□□ -0.55
CHPF2-201ENST00000035307 LASP1Q14847 261 aaKnown RBP11.59□□□□□ -0.55
CHPF2-201ENST00000035307 DUOXA1Q1HG43 343 aa11.59□□□□□ -0.55
CHPF2-201ENST00000035307 ARMCX4Q5H9R4 360 aa11.59□□□□□ -0.55
CHPF2-201ENST00000035307 C1orf53Q5VUE5 145 aa11.59□□□□□ -0.55
CHPF2-201ENST00000035307 TRIM73Q86UV7 250 aa11.59□□□□□ -0.55
CHPF2-201ENST00000035307 IQCHQ86VS3 1027 aa11.59□□□□□ -0.55
CHPF2-201ENST00000035307 PHF21AQ96BD5 680 aa11.59□□□□□ -0.55
CHPF2-201ENST00000035307 FOXQ1Q9C009 403 aa11.59□□□□□ -0.55
CHPF2-201ENST00000035307 AP3M1Q9Y2T2 418 aa11.59□□□□□ -0.55
CHPF2-201ENST00000035307 PRSS51A0A1B0GVH4 220 aa11.59□□□□□ -0.55
CHPF2-201ENST00000035307 CACNG3O60359 315 aa11.59□□□□□ -0.55
CHPF2-201ENST00000035307 UGT2B11O75310 529 aa11.59□□□□□ -0.55
CHPF2-201ENST00000035307 ITGA2P17301 1181 aa11.59□□□□□ -0.55
CHPF2-201ENST00000035307 CDH3P22223 829 aa11.59□□□□□ -0.55
CHPF2-201ENST00000035307 TBPL1P62380 186 aa11.59□□□□□ -0.55
CHPF2-201ENST00000035307 TGM3Q08188 693 aa11.59□□□□□ -0.55
CHPF2-201ENST00000035307 MTAPQ13126 283 aa11.59□□□□□ -0.55
CHPF2-201ENST00000035307 DNASE1L3Q13609 305 aa11.59□□□□□ -0.55
CHPF2-201ENST00000035307 ZNF730Q6ZMV8 503 aa11.59□□□□□ -0.55
CHPF2-201ENST00000035307 UXS1Q8NBZ7 420 aa11.59□□□□□ -0.55
CHPF2-201ENST00000035307 ZNF740Q8NDX6 193 aa11.59□□□□□ -0.55
CHPF2-201ENST00000035307 HUS1BQ8NHY5 278 aa11.59□□□□□ -0.55
CHPF2-201ENST00000035307 CAPSLQ8WWF8 208 aa11.59□□□□□ -0.55
CHPF2-201ENST00000035307 BORCS5Q969J3 196 aa11.59□□□□□ -0.55
CHPF2-201ENST00000035307 VWCEQ96DN2 955 aa11.59□□□□□ -0.55
CHPF2-201ENST00000035307 POLMQ9NP87 494 aaPredicted RBP11.59□□□□□ -0.55
CHPF2-201ENST00000035307 MBNL1Q9NR56 388 aaKnown RBP11.59□□□□□ -0.55
CHPF2-201ENST00000035307 ERVK-18Q9QC07 812 aa11.59□□□□□ -0.55
CHPF2-201ENST00000035307 RPS6KB2Q9UBS0 482 aa11.59□□□□□ -0.55
CHPF2-201ENST00000035307 OARD1Q9Y530 152 aa11.59□□□□□ -0.55
CHPF2-201ENST00000035307 H3BSH0 61 aa11.59□□□□□ -0.55
CHPF2-201ENST00000035307 PI15O43692 258 aa11.59□□□□□ -0.55
CHPF2-201ENST00000035307 NME6O75414 186 aaPredicted RBP11.59□□□□□ -0.55
CHPF2-201ENST00000035307 TFAP2AP05549 437 aa11.59□□□□□ -0.55
CHPF2-201ENST00000035307 AP1S2P56377 157 aa11.59□□□□□ -0.55
CHPF2-201ENST00000035307 RPL26P61254 145 aaKnown RBP11.59□□□□□ -0.55
CHPF2-201ENST00000035307 CDK6Q00534 326 aa11.59□□□□□ -0.55
CHPF2-201ENST00000035307 ABHD18Q0P651 414 aa11.59□□□□□ -0.55
CHPF2-201ENST00000035307 CYBRD1Q53TN4 286 aa11.59□□□□□ -0.55
CHPF2-201ENST00000035307 DCST1Q5T197 706 aa11.59□□□□□ -0.55
CHPF2-201ENST00000035307 ANKRD34AQ69YU3 496 aa11.59□□□□□ -0.55
CHPF2-201ENST00000035307 Q6ZSR9 355 aa11.59□□□□□ -0.55
CHPF2-201ENST00000035307 ZNF551Q7Z340 670 aaPredicted RBP11.59□□□□□ -0.55
CHPF2-201ENST00000035307 PIWIL3Q7Z3Z3 882 aaKnown RBP11.59□□□□□ -0.55
CHPF2-201ENST00000035307 ZNF607Q96SK3 696 aa11.59□□□□□ -0.55
CHPF2-201ENST00000035307 CNPPD1Q9BV87 410 aa11.59□□□□□ -0.55
CHPF2-201ENST00000035307 TTTY10Q9BZA0 68 aa11.59□□□□□ -0.55
CHPF2-201ENST00000035307 MUC13Q9H3R2 512 aa11.59□□□□□ -0.55
CHPF2-201ENST00000035307 KCNK12Q9HB15 430 aa11.59□□□□□ -0.55
CHPF2-201ENST00000035307 DNAAF2Q9NVR5 837 aaKnown RBP11.59□□□□□ -0.55
CHPF2-201ENST00000035307 DNAJC27Q9NZQ0 273 aa11.59□□□□□ -0.55
CHPF2-201ENST00000035307 TMEM181Q9P2C4 612 aa11.59□□□□□ -0.55
CHPF2-201ENST00000035307 AP3D1O14617 1153 aa11.58□□□□□ -0.56
CHPF2-201ENST00000035307 EEDO75530 441 aaKnown RBP11.58□□□□□ -0.56
CHPF2-201ENST00000035307 AP2A2O94973 939 aa11.58□□□□□ -0.56
CHPF2-201ENST00000035307 C1QAP02745 245 aa11.58□□□□□ -0.56
CHPF2-201ENST00000035307 NT5EP21589 574 aa11.58□□□□□ -0.56
CHPF2-201ENST00000035307 CTHP32929 405 aa11.58□□□□□ -0.56
CHPF2-201ENST00000035307 NCBP2P52298 156 aaKnown RBP eCLIP11.58□□□□□ -0.56
CHPF2-201ENST00000035307 RGS8P57771 180 aaPredicted RBP11.58□□□□□ -0.56
CHPF2-201ENST00000035307 SRP54P61011 504 aaKnown RBP11.58□□□□□ -0.56
CHPF2-201ENST00000035307 USP53Q70EK8 1073 aa11.58□□□□□ -0.56
CHPF2-201ENST00000035307 SNX29P2Q8IUI4 249 aa11.58□□□□□ -0.56
CHPF2-201ENST00000035307 CEP295NLQ96MC4 621 aa11.58□□□□□ -0.56
CHPF2-201ENST00000035307 LGR4Q9BXB1 951 aa11.58□□□□□ -0.56
CHPF2-201ENST00000035307 TRIT1Q9H3H1 467 aaKnown RBP11.58□□□□□ -0.56
CHPF2-201ENST00000035307 SRMSQ9H3Y6 488 aa11.58□□□□□ -0.56
CHPF2-201ENST00000035307 HSFX1Q9UBD0 423 aa11.58□□□□□ -0.56
CHPF2-201ENST00000035307 OR10H1Q9Y4A9 318 aa11.58□□□□□ -0.56
CHPF2-201ENST00000035307 LILRB3O75022 631 aa11.58□□□□□ -0.56
CHPF2-201ENST00000035307 PCDH1Q08174 1060 aa11.58□□□□□ -0.56
CHPF2-201ENST00000035307 DEFB110Q30KQ9 67 aa11.58□□□□□ -0.56
CHPF2-201ENST00000035307 FAM91A1Q658Y4 838 aa11.58□□□□□ -0.56
CHPF2-201ENST00000035307 ERICH5Q6P6B1 374 aa11.58□□□□□ -0.56
CHPF2-201ENST00000035307 LRRC70Q7Z2Q7 622 aa11.58□□□□□ -0.56
CHPF2-201ENST00000035307 FAM86B1Q8N7N1 296 aa11.58□□□□□ -0.56
CHPF2-201ENST00000035307 VN1R2Q8NFZ6 395 aa11.58□□□□□ -0.56
CHPF2-201ENST00000035307 ZUFSPQ96AP4 578 aa11.58□□□□□ -0.56
CHPF2-201ENST00000035307 SLC2A11Q9BYW1 496 aa11.58□□□□□ -0.56
CHPF2-201ENST00000035307 ACPTQ9BZG2 426 aa11.58□□□□□ -0.56
CHPF2-201ENST00000035307 POPDC3Q9HBV1 291 aa11.58□□□□□ -0.56
CHPF2-201ENST00000035307 CD93Q9NPY3 652 aa11.58□□□□□ -0.56
CHPF2-201ENST00000035307 ZNF780BQ9Y6R6 833 aa11.58□□□□□ -0.56
CHPF2-201ENST00000035307 FAM170BA6NMN3 283 aa11.58□□□□□ -0.56
CHPF2-201ENST00000035307 ARHGEF33A8MVX0 844 aa11.58□□□□□ -0.56
CHPF2-201ENST00000035307 ZNF99A8MXY4 864 aaPredicted RBP11.58□□□□□ -0.56
CHPF2-201ENST00000035307 E2F3O00716 465 aa11.58□□□□□ -0.56
CHPF2-201ENST00000035307 CDC123O75794 336 aaPredicted RBP11.58□□□□□ -0.56
CHPF2-201ENST00000035307 IL3P08700 152 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms