RNA–Protein interactions for RNA: ENST00000003912.7

NIPAL3-201, Transcript of NIPA like domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene NIPAL3, Length 5,481 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-201ENST00000003912 OR6K6Q8NGW6 343 aa9.96□□□□□ -0.81
NIPAL3-201ENST00000003912 BBS10Q8TAM1 723 aa9.96□□□□□ -0.81
NIPAL3-201ENST00000003912 FBXL8Q96CD0 374 aa9.96□□□□□ -0.81
NIPAL3-201ENST00000003912 F2RL3Q96RI0 385 aa9.96□□□□□ -0.81
NIPAL3-201ENST00000003912 COQ7Q99807 217 aa9.96□□□□□ -0.81
NIPAL3-201ENST00000003912 UBE2ZQ9H832 354 aaPredicted RBP9.96□□□□□ -0.81
NIPAL3-201ENST00000003912 ABLIM1O14639 778 aa9.96□□□□□ -0.81
NIPAL3-201ENST00000003912 CPNE3O75131 537 aaKnown RBP9.96□□□□□ -0.81
NIPAL3-201ENST00000003912 LSM3P62310 102 aaKnown RBP9.96□□□□□ -0.81
NIPAL3-201ENST00000003912 FGL2Q14314 439 aa9.96□□□□□ -0.81
NIPAL3-201ENST00000003912 FLYWCH1Q4VC44 716 aa9.96□□□□□ -0.81
NIPAL3-201ENST00000003912 PDZD3Q86UT5 571 aa9.96□□□□□ -0.81
NIPAL3-201ENST00000003912 ARHGAP12Q8IWW6 846 aa9.96□□□□□ -0.81
NIPAL3-201ENST00000003912 ASB9Q96DX5 294 aa9.96□□□□□ -0.81
NIPAL3-201ENST00000003912 PKP4Q99569 1192 aa9.96□□□□□ -0.81
NIPAL3-201ENST00000003912 RPF2Q9H7B2 306 aaKnown RBP9.96□□□□□ -0.81
NIPAL3-201ENST00000003912 FEZF1A0PJY2 475 aa9.96□□□□□ -0.81
NIPAL3-201ENST00000003912 ITGA3P26006 1051 aa9.96□□□□□ -0.81
NIPAL3-201ENST00000003912 DNAJA1P31689 397 aaKnown RBP9.96□□□□□ -0.81
NIPAL3-201ENST00000003912 BMP8BP34820 402 aa9.96□□□□□ -0.81
NIPAL3-201ENST00000003912 GGT5P36269 586 aa9.96□□□□□ -0.81
NIPAL3-201ENST00000003912 RASGEF1BQ0VAM2 473 aa9.96□□□□□ -0.81
NIPAL3-201ENST00000003912 BMP8AQ7Z5Y6 402 aa9.96□□□□□ -0.81
NIPAL3-201ENST00000003912 SYVN1Q86TM6 617 aa9.96□□□□□ -0.81
NIPAL3-201ENST00000003912 GPR26Q8NDV2 337 aa9.96□□□□□ -0.81
NIPAL3-201ENST00000003912 OR10H4Q8NGA5 316 aa9.96□□□□□ -0.81
NIPAL3-201ENST00000003912 OR4K1Q8NGD4 311 aa9.96□□□□□ -0.81
NIPAL3-201ENST00000003912 TSPEARQ8WU66 669 aa9.96□□□□□ -0.81
NIPAL3-201ENST00000003912 EZH1Q92800 747 aaPredicted RBP9.96□□□□□ -0.81
NIPAL3-201ENST00000003912 ZNF778Q96MU6 729 aa9.96□□□□□ -0.81
NIPAL3-201ENST00000003912 CADM1Q9BY67 442 aaKnown RBP9.96□□□□□ -0.81
NIPAL3-201ENST00000003912 ZBTB26Q9HCK0 441 aa9.96□□□□□ -0.81
NIPAL3-201ENST00000003912 DAPK2Q9UIK4 370 aa9.96□□□□□ -0.81
NIPAL3-201ENST00000003912 PLCL2Q9UPR0 1127 aa9.96□□□□□ -0.81
NIPAL3-201ENST00000003912 LYNP07948 512 aa9.96□□□□□ -0.82
NIPAL3-201ENST00000003912 PSMA1P25786 263 aaKnown RBP9.96□□□□□ -0.82
NIPAL3-201ENST00000003912 IRS1P35568 1242 aa9.96□□□□□ -0.82
NIPAL3-201ENST00000003912 RAB14P61106 215 aa9.96□□□□□ -0.82
NIPAL3-201ENST00000003912 RIPK1Q13546 671 aa9.96□□□□□ -0.82
NIPAL3-201ENST00000003912 NFATC4Q14934 902 aa9.96□□□□□ -0.82
NIPAL3-201ENST00000003912 KIR2DS3Q14952 304 aa9.96□□□□□ -0.82
NIPAL3-201ENST00000003912 ZSWIM7Q19AV6 140 aa9.96□□□□□ -0.82
NIPAL3-201ENST00000003912 C1orf189Q5VU69 101 aa9.96□□□□□ -0.82
NIPAL3-201ENST00000003912 TCEAL6Q6IPX3 200 aa9.96□□□□□ -0.82
NIPAL3-201ENST00000003912 TMEM214Q6NUQ4 689 aaKnown RBP9.96□□□□□ -0.82
NIPAL3-201ENST00000003912 LGI4Q8N135 537 aa9.96□□□□□ -0.82
NIPAL3-201ENST00000003912 LPAR4Q99677 370 aa9.96□□□□□ -0.82
NIPAL3-201ENST00000003912 HYKKA2RU49 373 aa9.96□□□□□ -0.82
NIPAL3-201ENST00000003912 SLC30A4O14863 429 aa9.96□□□□□ -0.82
NIPAL3-201ENST00000003912 ARPC2O15144 300 aa9.96□□□□□ -0.82
NIPAL3-201ENST00000003912 TPD52L2O43399 206 aaKnown RBP9.96□□□□□ -0.82
NIPAL3-201ENST00000003912 DFNA5O60443 496 aa9.96□□□□□ -0.82
NIPAL3-201ENST00000003912 MTHFD1P11586 935 aaKnown RBP9.96□□□□□ -0.82
NIPAL3-201ENST00000003912 IL12RB1P42701 662 aa9.96□□□□□ -0.82
NIPAL3-201ENST00000003912 YPEL5P62699 121 aa9.96□□□□□ -0.82
NIPAL3-201ENST00000003912 CD47Q08722 323 aa9.96□□□□□ -0.82
NIPAL3-201ENST00000003912 TLR1Q15399 786 aa9.96□□□□□ -0.82
NIPAL3-201ENST00000003912 CDKL4Q5MAI5 379 aa9.96□□□□□ -0.82
NIPAL3-201ENST00000003912 ANKRD26P1Q6NSI1 321 aa9.96□□□□□ -0.82
NIPAL3-201ENST00000003912 TMEM173Q86WV6 379 aaPredicted RBP9.96□□□□□ -0.82
NIPAL3-201ENST00000003912 ELSPBP1Q96BH3 223 aa9.96□□□□□ -0.82
NIPAL3-201ENST00000003912 TRIM2Q9C040 744 aa9.96□□□□□ -0.82
NIPAL3-201ENST00000003912 MKS1Q9NXB0 559 aa9.96□□□□□ -0.82
NIPAL3-201ENST00000003912 LIPT1Q9Y234 373 aa9.96□□□□□ -0.82
NIPAL3-201ENST00000003912 HS3ST2Q9Y278 367 aa9.96□□□□□ -0.82
NIPAL3-201ENST00000003912 OAS3Q9Y6K5 1087 aaKnown RBP9.96□□□□□ -0.82
NIPAL3-201ENST00000003912 CACNG3O60359 315 aa9.95□□□□□ -0.82
NIPAL3-201ENST00000003912 KHDRBS3O75525 346 aaKnown RBP9.95□□□□□ -0.82
NIPAL3-201ENST00000003912 PORP16435 677 aaPredicted RBP9.95□□□□□ -0.82
NIPAL3-201ENST00000003912 GABRA3P34903 492 aa9.95□□□□□ -0.82
NIPAL3-201ENST00000003912 ARF5P84085 180 aa9.95□□□□□ -0.82
NIPAL3-201ENST00000003912 UNC50Q53HI1 259 aa9.95□□□□□ -0.82
NIPAL3-201ENST00000003912 ZNF761Q86XN6 746 aaPredicted RBP9.95□□□□□ -0.82
NIPAL3-201ENST00000003912 RAB43Q86YS6 212 aa9.95□□□□□ -0.82
NIPAL3-201ENST00000003912 UBE2J2Q8N2K1 259 aa9.95□□□□□ -0.82
NIPAL3-201ENST00000003912 OR6N1Q8NGY5 312 aa9.95□□□□□ -0.82
NIPAL3-201ENST00000003912 TIMM29Q9BSF4 260 aa9.95□□□□□ -0.82
NIPAL3-201ENST00000003912 KATNBL1Q9H079 304 aa9.95□□□□□ -0.82
NIPAL3-201ENST00000003912 CWH43Q9H720 699 aa9.95□□□□□ -0.82
NIPAL3-201ENST00000003912 PDE10AQ9Y233 779 aa9.95□□□□□ -0.82
NIPAL3-201ENST00000003912 TMEM5Q9Y2B1 443 aa9.95□□□□□ -0.82
NIPAL3-201ENST00000003912 A0A0J9YY10 115 aa9.95□□□□□ -0.82
NIPAL3-201ENST00000003912 PRSS38A1L453 326 aa9.95□□□□□ -0.82
NIPAL3-201ENST00000003912 TAF4O00268 1085 aa9.95□□□□□ -0.82
NIPAL3-201ENST00000003912 AK1P00568 194 aa9.95□□□□□ -0.82
NIPAL3-201ENST00000003912 CD63P08962 238 aa9.95□□□□□ -0.82
NIPAL3-201ENST00000003912 SMAD4Q13485 552 aaKnown RBP9.95□□□□□ -0.82
NIPAL3-201ENST00000003912 PUM1Q14671 1186 aaKnown RBP eCLIP9.95□□□□□ -0.82
NIPAL3-201ENST00000003912 DDI2Q5TDH0 399 aa9.95□□□□□ -0.82
NIPAL3-201ENST00000003912 ZNF433Q8N7K0 673 aaPredicted RBP9.95□□□□□ -0.82
NIPAL3-201ENST00000003912 NUP43Q8NFH3 380 aa9.95□□□□□ -0.82
NIPAL3-201ENST00000003912 PROKR2Q8NFJ6 384 aa9.95□□□□□ -0.82
NIPAL3-201ENST00000003912 POLR1CO15160 346 aaPredicted RBP9.95□□□□□ -0.82
NIPAL3-201ENST00000003912 FGF3P11487 239 aaPredicted RBP9.95□□□□□ -0.82
NIPAL3-201ENST00000003912 OTX2P32243 289 aa9.95□□□□□ -0.82
NIPAL3-201ENST00000003912 MAPK11Q15759 364 aa9.95□□□□□ -0.82
NIPAL3-201ENST00000003912 NADSYN1Q6IA69 706 aa9.95□□□□□ -0.82
NIPAL3-201ENST00000003912 CXorf57Q6NSI4 855 aaKnown RBP9.95□□□□□ -0.82
NIPAL3-201ENST00000003912 LAPTM4BQ86VI4 370 aa9.95□□□□□ -0.82
NIPAL3-201ENST00000003912 HUS1BQ8NHY5 278 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms