RNA–Protein interactions for RNA: ENSMUST00000092215.5

Ccdc38-201, Transcript of Coiled-coil domain-containing protein 38, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ccdc38, Length 3,656 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc38-201ENSMUST00000092215 E2f6O54917 272 aa9.48□□□□□ -0.89
Ccdc38-201ENSMUST00000092215 Il1r2P27931 410 aa9.48□□□□□ -0.89
Ccdc38-201ENSMUST00000092215 Cdkn2bP55271 130 aa9.48□□□□□ -0.89
Ccdc38-201ENSMUST00000092215 Arf3P61205 181 aa9.48□□□□□ -0.89
Ccdc38-201ENSMUST00000092215 Il11ra2P70225 432 aa9.48□□□□□ -0.89
Ccdc38-201ENSMUST00000092215 Emx2Q04744 253 aa9.48□□□□□ -0.89
Ccdc38-201ENSMUST00000092215 Ankdd1bQ14DN9 521 aa9.48□□□□□ -0.89
Ccdc38-201ENSMUST00000092215 Actr5Q80US4 605 aaKnown RBP9.48□□□□□ -0.89
Ccdc38-201ENSMUST00000092215 Ccdc50Q810U5 305 aaKnown RBP9.48□□□□□ -0.89
Ccdc38-201ENSMUST00000092215 D3Ertd751eQ8BGN2 192 aa9.48□□□□□ -0.89
Ccdc38-201ENSMUST00000092215 Gucd1Q8BZI6 239 aa9.48□□□□□ -0.89
Ccdc38-201ENSMUST00000092215 Colec12Q8K4Q8 742 aa9.48□□□□□ -0.89
Ccdc38-201ENSMUST00000092215 RtbdnQ8QZY4 247 aa9.48□□□□□ -0.89
Ccdc38-201ENSMUST00000092215 Hint3Q9CPS6 165 aa9.48□□□□□ -0.89
Ccdc38-201ENSMUST00000092215 Ogfod3Q9D136 315 aa9.48□□□□□ -0.89
Ccdc38-201ENSMUST00000092215 Taf8Q9EQH4 308 aa9.48□□□□□ -0.89
Ccdc38-201ENSMUST00000092215 Acot2Q9QYR9 453 aa9.48□□□□□ -0.89
Ccdc38-201ENSMUST00000092215 SqorQ9R112 450 aa9.48□□□□□ -0.89
Ccdc38-201ENSMUST00000092215 Oc90Q9Z0L3 485 aa9.48□□□□□ -0.89
Ccdc38-201ENSMUST00000092215 Spta1P08032 2415 aa9.48□□□□□ -0.89
Ccdc38-201ENSMUST00000092215 Espl1P60330 2118 aa9.48□□□□□ -0.89
Ccdc38-201ENSMUST00000092215 Dock4P59764 1978 aa9.48□□□□□ -0.89
Ccdc38-201ENSMUST00000092215 Smok3cA0A087WSF2 504 aa9.48□□□□□ -0.89
Ccdc38-201ENSMUST00000092215 Lgr4A2ARI4 951 aa9.48□□□□□ -0.89
Ccdc38-201ENSMUST00000092215 Olfr564E9PWA8 316 aa9.48□□□□□ -0.89
Ccdc38-201ENSMUST00000092215 Znf296E9Q6W4 445 aaKnown RBP9.48□□□□□ -0.89
Ccdc38-201ENSMUST00000092215 Gm10250G3X9L6 160 aaKnown RBP9.48□□□□□ -0.89
Ccdc38-201ENSMUST00000092215 CflarO35732 481 aa9.48□□□□□ -0.89
Ccdc38-201ENSMUST00000092215 Hnrnph1O35737 449 aaKnown RBP9.48□□□□□ -0.89
Ccdc38-201ENSMUST00000092215 Cdh4P39038 913 aa9.48□□□□□ -0.89
Ccdc38-201ENSMUST00000092215 Plin2P43883 425 aa9.48□□□□□ -0.89
Ccdc38-201ENSMUST00000092215 Rph3aP47708 681 aa9.48□□□□□ -0.89
Ccdc38-201ENSMUST00000092215 ThraP63058 492 aa9.48□□□□□ -0.89
Ccdc38-201ENSMUST00000092215 Il12rb2P97378 874 aa9.48□□□□□ -0.89
Ccdc38-201ENSMUST00000092215 Pla2g5P97391 137 aa9.48□□□□□ -0.89
Ccdc38-201ENSMUST00000092215 Tmem102Q3UPR7 509 aa9.48□□□□□ -0.89
Ccdc38-201ENSMUST00000092215 Trp53i11Q4QQM4 189 aa9.48□□□□□ -0.89
Ccdc38-201ENSMUST00000092215 Olfr1085Q7TR64 313 aa9.48□□□□□ -0.89
Ccdc38-201ENSMUST00000092215 Mief1Q8BGV8 463 aa9.48□□□□□ -0.89
Ccdc38-201ENSMUST00000092215 Arl14epQ8BIX3 276 aa9.48□□□□□ -0.89
Ccdc38-201ENSMUST00000092215 Kcns3Q8BQZ8 491 aa9.48□□□□□ -0.89
Ccdc38-201ENSMUST00000092215 Larp4Q8BWW4 719 aaKnown RBP9.48□□□□□ -0.89
Ccdc38-201ENSMUST00000092215 Fbxl3Q8C4V4 428 aa9.48□□□□□ -0.89
Ccdc38-201ENSMUST00000092215 Lrrc25Q8K1T1 297 aa9.48□□□□□ -0.89
Ccdc38-201ENSMUST00000092215 Mmp21Q8K3F2 568 aa9.48□□□□□ -0.89
Ccdc38-201ENSMUST00000092215 Akr1c21Q91WR5 323 aa9.48□□□□□ -0.89
Ccdc38-201ENSMUST00000092215 Grip1Q925T6 1127 aa9.48□□□□□ -0.89
Ccdc38-201ENSMUST00000092215 Nudt21Q9CQF3 227 aaKnown RBP9.48□□□□□ -0.89
Ccdc38-201ENSMUST00000092215 Atp5hQ9DCX2 161 aa9.48□□□□□ -0.89
Ccdc38-201ENSMUST00000092215 DptQ9QZZ6 201 aa9.48□□□□□ -0.89
Ccdc38-201ENSMUST00000092215 Khdrbs2Q9WU01 349 aa9.48□□□□□ -0.89
Ccdc38-201ENSMUST00000092215 Foxq1O70220 400 aa9.47□□□□□ -0.89
Ccdc38-201ENSMUST00000092215 Prim2P33610 505 aa9.47□□□□□ -0.89
Ccdc38-201ENSMUST00000092215 Ruvbl1P60122 456 aaKnown RBP9.47□□□□□ -0.89
Ccdc38-201ENSMUST00000092215 Micall2Q3TN34 1009 aa9.47□□□□□ -0.89
Ccdc38-201ENSMUST00000092215 Nsg1Q62092 185 aa9.47□□□□□ -0.89
Ccdc38-201ENSMUST00000092215 Rbm11Q80YT9 238 aa9.47□□□□□ -0.89
Ccdc38-201ENSMUST00000092215 Arl15Q8BGR6 204 aa9.47□□□□□ -0.89
Ccdc38-201ENSMUST00000092215 Fam92aQ8BP22 355 aa9.47□□□□□ -0.89
Ccdc38-201ENSMUST00000092215 Cpsf4Q8BQZ5 211 aaKnown RBP9.47□□□□□ -0.89
Ccdc38-201ENSMUST00000092215 Olfr522Q8VGL1 312 aa9.47□□□□□ -0.89
Ccdc38-201ENSMUST00000092215 Klk6Q91Y82 253 aa9.47□□□□□ -0.89
Ccdc38-201ENSMUST00000092215 EedQ921E6 441 aaKnown RBP9.47□□□□□ -0.89
Ccdc38-201ENSMUST00000092215 Hemk1Q921L7 340 aa9.47□□□□□ -0.89
Ccdc38-201ENSMUST00000092215 Snrpb2Q9CQI7 225 aaKnown RBP9.47□□□□□ -0.89
Ccdc38-201ENSMUST00000092215 Utp11Q9CZJ1 253 aaKnown RBP9.47□□□□□ -0.89
Ccdc38-201ENSMUST00000092215 Tmem30cQ9D4D7 342 aa9.47□□□□□ -0.89
Ccdc38-201ENSMUST00000092215 Ing2Q9ESK4 281 aa9.47□□□□□ -0.89
Ccdc38-201ENSMUST00000092215 Adat1Q9JHI2 499 aa9.47□□□□□ -0.89
Ccdc38-201ENSMUST00000092215 PtsQ9R1Z7 144 aa9.47□□□□□ -0.89
Ccdc38-201ENSMUST00000092215 AgtrapQ9WVK0 161 aa9.47□□□□□ -0.89
Ccdc38-201ENSMUST00000092215 Ehd1Q9WVK4 534 aaKnown RBP9.47□□□□□ -0.89
Ccdc38-201ENSMUST00000092215 VcanQ62059 3357 aa9.47□□□□□ -0.89
Ccdc38-201ENSMUST00000092215 Slc25a54B1AUS6 473 aa9.47□□□□□ -0.89
Ccdc38-201ENSMUST00000092215 Ifi213D3Z5G0 586 aa9.47□□□□□ -0.89
Ccdc38-201ENSMUST00000092215 Vmn2r45L7N2B5 852 aa9.47□□□□□ -0.89
Ccdc38-201ENSMUST00000092215 Hk2O08528 917 aaKnown RBP9.47□□□□□ -0.89
Ccdc38-201ENSMUST00000092215 Unc5cO08747 931 aa9.47□□□□□ -0.89
Ccdc38-201ENSMUST00000092215 Snx3O70492 162 aa9.47□□□□□ -0.89
Ccdc38-201ENSMUST00000092215 Zfp59P16373 634 aa9.47□□□□□ -0.89
Ccdc38-201ENSMUST00000092215 Pmp22P16646 161 aa9.47□□□□□ -0.89
Ccdc38-201ENSMUST00000092215 Gabra3P26049 492 aa9.47□□□□□ -0.89
Ccdc38-201ENSMUST00000092215 FahP35505 419 aa9.47□□□□□ -0.89
Ccdc38-201ENSMUST00000092215 Mbl1P39039 239 aa9.47□□□□□ -0.89
Ccdc38-201ENSMUST00000092215 Eef1a2P62631 463 aaKnown RBP9.47□□□□□ -0.89
Ccdc38-201ENSMUST00000092215 Mapk1P63085 358 aa9.47□□□□□ -0.89
Ccdc38-201ENSMUST00000092215 Cyp2j13Q3UNV4 503 aa9.47□□□□□ -0.89
Ccdc38-201ENSMUST00000092215 Hipk4Q3V016 616 aa9.47□□□□□ -0.89
Ccdc38-201ENSMUST00000092215 Proser1Q5PRE5 913 aa9.47□□□□□ -0.89
Ccdc38-201ENSMUST00000092215 Tmbim1Q8BJZ3 309 aa9.47□□□□□ -0.89
Ccdc38-201ENSMUST00000092215 Rcn2Q8BP92 320 aa9.47□□□□□ -0.89
Ccdc38-201ENSMUST00000092215 Micu1Q8VCX5 477 aa9.47□□□□□ -0.89
Ccdc38-201ENSMUST00000092215 Erlec1Q8VEH8 483 aa9.47□□□□□ -0.89
Ccdc38-201ENSMUST00000092215 Cstf3Q99LI7 717 aaKnown RBP9.47□□□□□ -0.89
Ccdc38-201ENSMUST00000092215 Defb5Q9EPV9 64 aa9.47□□□□□ -0.89
Ccdc38-201ENSMUST00000092215 Ropn1Q9ESG2 212 aa9.47□□□□□ -0.89
Ccdc38-201ENSMUST00000092215 Morf4l2Q9R0Q4 288 aa9.47□□□□□ -0.89
Ccdc38-201ENSMUST00000092215 PrkraQ9WTX2 313 aaKnown RBP9.47□□□□□ -0.89
Ccdc38-201ENSMUST00000092215 Uba2Q9Z1F9 638 aa9.47□□□□□ -0.89
Ccdc38-201ENSMUST00000092215 Wdfy4E9Q2M9 3149 aa9.47□□□□□ -0.89
Retrieved 100 of 22,080 RNA–protein pairs in 35.8 ms