RNA–Protein interactions for RNA: ENSMUST00000043767.8

Upf3a-201, Transcript of MCG3697, isoform CRA_c, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Upf3a, Length 2,057 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3a-201ENSMUST00000043767 Plekha6Q7TQG1 1173 aa21.91■■□□□ 1.1
Upf3a-201ENSMUST00000043767 Olfr1313Q7TQW8 311 aa21.91■■□□□ 1.1
Upf3a-201ENSMUST00000043767 Lair1Q8BG84 263 aa21.91■■□□□ 1.1
Upf3a-201ENSMUST00000043767 Slc25a12Q8BH59 677 aa21.91■■□□□ 1.1
Upf3a-201ENSMUST00000043767 Kyat1Q8BTY1 424 aa21.91■■□□□ 1.1
Upf3a-201ENSMUST00000043767 Q8C3I9 435 aa21.91■■□□□ 1.1
Upf3a-201ENSMUST00000043767 Rcor1Q8CFE3 480 aa21.91■■□□□ 1.1
Upf3a-201ENSMUST00000043767 Olfr850Q8VFF2 315 aa21.91■■□□□ 1.1
Upf3a-201ENSMUST00000043767 OptcQ920A0 328 aa21.91■■□□□ 1.1
Upf3a-201ENSMUST00000043767 Dpy30Q99LT0 99 aa21.91■■□□□ 1.1
Upf3a-201ENSMUST00000043767 FastkQ9JIX9 511 aa21.91■■□□□ 1.1
Upf3a-201ENSMUST00000043767 Csnk1eQ9JMK2 416 aaKnown RBP21.91■■□□□ 1.1
Upf3a-201ENSMUST00000043767 Olfr1145A2AVC7 325 aa21.91■■□□□ 1.1
Upf3a-201ENSMUST00000043767 Zar1lC3VD30 291 aa21.91■■□□□ 1.1
Upf3a-201ENSMUST00000043767 ChadlE9Q7T7 748 aa21.91■■□□□ 1.1
Upf3a-201ENSMUST00000043767 Rhox6O70238 227 aa21.91■■□□□ 1.1
Upf3a-201ENSMUST00000043767 JunbP09450 344 aaKnown RBP21.91■■□□□ 1.1
Upf3a-201ENSMUST00000043767 Defa8P50706 81 aa21.91■■□□□ 1.1
Upf3a-201ENSMUST00000043767 Fahd2Q3TC72 313 aa21.91■■□□□ 1.1
Upf3a-201ENSMUST00000043767 JrkQ60976 557 aa21.91■■□□□ 1.1
Upf3a-201ENSMUST00000043767 Elavl4Q61701 385 aaKnown RBP21.91■■□□□ 1.1
Upf3a-201ENSMUST00000043767 Lrrc8dQ8BGR2 859 aa21.91■■□□□ 1.1
Upf3a-201ENSMUST00000043767 Vps26bQ8C0E2 336 aa21.91■■□□□ 1.1
Upf3a-201ENSMUST00000043767 Sertm1Q8CD78 107 aa21.91■■□□□ 1.1
Upf3a-201ENSMUST00000043767 Olfr437Q8VEV1 310 aa21.91■■□□□ 1.1
Upf3a-201ENSMUST00000043767 Cela1Q91X79 266 aa21.91■■□□□ 1.1
Upf3a-201ENSMUST00000043767 Tmbim6Q9D2C7 237 aa21.91■■□□□ 1.1
Upf3a-201ENSMUST00000043767 Sae1Q9R1T2 350 aa21.91■■□□□ 1.1
Upf3a-201ENSMUST00000043767 Vmn2r120E9PX34 856 aa21.9■■□□□ 1.1
Upf3a-201ENSMUST00000043767 GhrP16882 650 aa21.9■■□□□ 1.1
Upf3a-201ENSMUST00000043767 Fezf1Q0VDQ9 475 aa21.9■■□□□ 1.1
Upf3a-201ENSMUST00000043767 E330014E10RikQ3UL33 481 aa21.9■■□□□ 1.1
Upf3a-201ENSMUST00000043767 D5Ertd577eQ499F0 481 aa21.9■■□□□ 1.1
Upf3a-201ENSMUST00000043767 Osbp2Q5QNQ6 908 aa21.9■■□□□ 1.1
Upf3a-201ENSMUST00000043767 Tmc6Q7TN60 810 aa21.9■■□□□ 1.1
Upf3a-201ENSMUST00000043767 Kcng4Q80XM3 506 aa21.9■■□□□ 1.1
Upf3a-201ENSMUST00000043767 CenpiQ8K1K4 746 aa21.9■■□□□ 1.1
Upf3a-201ENSMUST00000043767 Noxo1Q8VCM2 349 aa21.9■■□□□ 1.1
Upf3a-201ENSMUST00000043767 Olfr811Q8VFI1 319 aa21.9■■□□□ 1.1
Upf3a-201ENSMUST00000043767 Q91W34 466 aa21.9■■□□□ 1.1
Upf3a-201ENSMUST00000043767 BniplQ99JU7 328 aa21.9■■□□□ 1.1
Upf3a-201ENSMUST00000043767 MtapQ9CQ65 283 aa21.9■■□□□ 1.1
Upf3a-201ENSMUST00000043767 Exosc7Q9D0M0 291 aaKnown RBP21.9■■□□□ 1.1
Upf3a-201ENSMUST00000043767 Mmp19Q9JHI0 527 aa21.9■■□□□ 1.1
Upf3a-201ENSMUST00000043767 Rgs1Q9JL25 209 aa21.9■■□□□ 1.1
Upf3a-201ENSMUST00000043767 Aqp5Q9WTY4 265 aa21.9■■□□□ 1.1
Upf3a-201ENSMUST00000043767 Olfr671A0A1B0GSN5 317 aa21.89■■□□□ 1.1
Upf3a-201ENSMUST00000043767 Itih4A6X935 942 aa21.89■■□□□ 1.1
Upf3a-201ENSMUST00000043767 Dlgap4B1AZP2 992 aa21.89■■□□□ 1.1
Upf3a-201ENSMUST00000043767 Spaca6E9Q8Q8 339 aa21.89■■□□□ 1.1
Upf3a-201ENSMUST00000043767 Rps13P62301 151 aaKnown RBP21.89■■□□□ 1.1
Upf3a-201ENSMUST00000043767 Arntl2Q2VPD4 579 aa21.89■■□□□ 1.1
Upf3a-201ENSMUST00000043767 Flot2Q60634 428 aaKnown RBP21.89■■□□□ 1.1
Upf3a-201ENSMUST00000043767 Lix1Q6P566 282 aa21.89■■□□□ 1.1
Upf3a-201ENSMUST00000043767 SinhcafQ8C8M1 221 aaKnown RBP21.89■■□□□ 1.1
Upf3a-201ENSMUST00000043767 Olfr1414Q8VGU5 312 aa21.89■■□□□ 1.1
Upf3a-201ENSMUST00000043767 Cdc42ep1Q91W92 409 aa21.89■■□□□ 1.1
Upf3a-201ENSMUST00000043767 Pcdha8Q91Y12 946 aa21.89■■□□□ 1.1
Upf3a-201ENSMUST00000043767 Clca3a2Q9EQR4 902 aa21.89■■□□□ 1.1
Upf3a-201ENSMUST00000043767 Ehd1Q9WVK4 534 aaKnown RBP21.89■■□□□ 1.1
Upf3a-201ENSMUST00000043767 Mbd4Q9Z2D7 554 aa21.89■■□□□ 1.1
Upf3a-201ENSMUST00000043767 Lrp4Q8VI56 1905 aa21.89■■□□□ 1.09
Upf3a-201ENSMUST00000043767 Ndor1A2AI05 598 aa21.89■■□□□ 1.09
Upf3a-201ENSMUST00000043767 Trmt1lA2RSY6 728 aaKnown RBP21.89■■□□□ 1.09
Upf3a-201ENSMUST00000043767 Cyp2d37-psF6YKB5 150 aa21.89■■□□□ 1.09
Upf3a-201ENSMUST00000043767 Tbxa2rP30987 341 aa21.89■■□□□ 1.09
Upf3a-201ENSMUST00000043767 EsrrgP62509 458 aa21.89■■□□□ 1.09
Upf3a-201ENSMUST00000043767 Slc13a5Q67BT3 572 aa21.89■■□□□ 1.09
Upf3a-201ENSMUST00000043767 Rab3ipQ68EF0 428 aa21.89■■□□□ 1.09
Upf3a-201ENSMUST00000043767 Il20raQ6PHB0 546 aa21.89■■□□□ 1.09
Upf3a-201ENSMUST00000043767 Tas2r131Q7M708 310 aa21.89■■□□□ 1.09
Upf3a-201ENSMUST00000043767 Snx32Q80ZJ7 404 aa21.89■■□□□ 1.09
Upf3a-201ENSMUST00000043767 Olfr1391Q8VFA4 311 aa21.89■■□□□ 1.09
Upf3a-201ENSMUST00000043767 Ift43Q9DA69 206 aa21.89■■□□□ 1.09
Upf3a-201ENSMUST00000043767 VapaQ9WV55 249 aaKnown RBP21.89■■□□□ 1.09
Upf3a-201ENSMUST00000043767 Myo15bI7HPW8 3033 aa21.89■■□□□ 1.09
Upf3a-201ENSMUST00000043767 Pgm2A2CEK3 580 aa21.88■■□□□ 1.09
Upf3a-201ENSMUST00000043767 Vmn2r61L7N2B8 865 aa21.88■■□□□ 1.09
Upf3a-201ENSMUST00000043767 Fkbp7O54998 218 aa21.88■■□□□ 1.09
Upf3a-201ENSMUST00000043767 Dll3O88516 592 aa21.88■■□□□ 1.09
Upf3a-201ENSMUST00000043767 Htr5bP31387 370 aa21.88■■□□□ 1.09
Upf3a-201ENSMUST00000043767 Lrig1P70193 1091 aa21.88■■□□□ 1.09
Upf3a-201ENSMUST00000043767 Dab1P97318 588 aa21.88■■□□□ 1.09
Upf3a-201ENSMUST00000043767 Eef2kmtQ3UZW7 335 aa21.88■■□□□ 1.09
Upf3a-201ENSMUST00000043767 ManeaQ6NXH2 462 aa21.88■■□□□ 1.09
Upf3a-201ENSMUST00000043767 Dcaf13Q6PAC3 445 aaKnown RBP21.88■■□□□ 1.09
Upf3a-201ENSMUST00000043767 Lrrc26Q91W20 331 aa21.88■■□□□ 1.09
Upf3a-201ENSMUST00000043767 Frmd4bQ920B0 1035 aa21.88■■□□□ 1.09
Upf3a-201ENSMUST00000043767 Rad51cQ924H5 366 aa21.88■■□□□ 1.09
Upf3a-201ENSMUST00000043767 Nudt7Q99P30 236 aa21.88■■□□□ 1.09
Upf3a-201ENSMUST00000043767 Vps29Q9QZ88 182 aa21.88■■□□□ 1.09
Upf3a-201ENSMUST00000043767 Tmem196V9GX04 182 aa21.88■■□□□ 1.09
Upf3a-201ENSMUST00000043767 Sap18O55128 153 aaKnown RBP21.87■■□□□ 1.09
Upf3a-201ENSMUST00000043767 Il12rb2P97378 874 aa21.87■■□□□ 1.09
Upf3a-201ENSMUST00000043767 Tmem248Q3TBN1 314 aa21.87■■□□□ 1.09
Upf3a-201ENSMUST00000043767 Tfb2mQ3TL26 396 aaKnown RBP21.87■■□□□ 1.09
Upf3a-201ENSMUST00000043767 Rassf5Q5EBH1 413 aa21.87■■□□□ 1.09
Upf3a-201ENSMUST00000043767 Krtcap2Q5RL79 136 aa21.87■■□□□ 1.09
Upf3a-201ENSMUST00000043767 Kir3dl2Q673W2 388 aa21.87■■□□□ 1.09
Upf3a-201ENSMUST00000043767 GalpQ810H5 117 aa21.87■■□□□ 1.09
Retrieved 100 of 22,080 RNA–protein pairs in 38 ms