RNA–Protein interactions for RNA: ENSMUST00000035164.9

Topbp1-201, Transcript of DNA topoisomerase 2-binding protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Topbp1, Length 5,224 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Topbp1-201ENSMUST00000035164 Spata13Q5DU57 656 aa10.93□□□□□ -0.66
Topbp1-201ENSMUST00000035164 Chil6Q80W26 440 aa10.93□□□□□ -0.66
Topbp1-201ENSMUST00000035164 Nipal3Q8BGN5 410 aa10.93□□□□□ -0.66
Topbp1-201ENSMUST00000035164 Nars2Q8BGV0 477 aa10.93□□□□□ -0.66
Topbp1-201ENSMUST00000035164 Cers6Q8C172 384 aa10.93□□□□□ -0.66
Topbp1-201ENSMUST00000035164 Yipf4Q8C407 246 aa10.93□□□□□ -0.66
Topbp1-201ENSMUST00000035164 Samd3Q8C4H2 520 aa10.93□□□□□ -0.66
Topbp1-201ENSMUST00000035164 Pih1d2Q8CHR9 315 aa10.93□□□□□ -0.66
Topbp1-201ENSMUST00000035164 Acad9Q8JZN5 625 aaKnown RBP10.93□□□□□ -0.66
Topbp1-201ENSMUST00000035164 Olfr818Q8VG46 318 aa10.93□□□□□ -0.66
Topbp1-201ENSMUST00000035164 Rab14Q91V41 215 aaKnown RBP10.93□□□□□ -0.66
Topbp1-201ENSMUST00000035164 Rad9aQ9Z0F6 389 aa10.93□□□□□ -0.66
Topbp1-201ENSMUST00000035164 Ubr3Q5U430 1889 aa10.93□□□□□ -0.66
Topbp1-201ENSMUST00000035164 Gm7929A0A286YDV3 213 aa10.93□□□□□ -0.66
Topbp1-201ENSMUST00000035164 Rhox2bA2A447 191 aa10.93□□□□□ -0.66
Topbp1-201ENSMUST00000035164 Rhox2cA2AWL9 191 aa10.93□□□□□ -0.66
Topbp1-201ENSMUST00000035164 Zfp40B1B1D3 796 aa10.93□□□□□ -0.66
Topbp1-201ENSMUST00000035164 Gm10718D3Z1I7 227 aa10.93□□□□□ -0.66
Topbp1-201ENSMUST00000035164 Gm21977F6U3N7 213 aa10.93□□□□□ -0.66
Topbp1-201ENSMUST00000035164 Gm8247F6VRJ8 213 aa10.93□□□□□ -0.66
Topbp1-201ENSMUST00000035164 Gm8005F6YKY3 213 aa10.93□□□□□ -0.66
Topbp1-201ENSMUST00000035164 Gm3015F6ZAP6 213 aa10.93□□□□□ -0.66
Topbp1-201ENSMUST00000035164 Gm8212F6ZMY5 213 aa10.93□□□□□ -0.66
Topbp1-201ENSMUST00000035164 Gm7954F7BAX1 213 aa10.93□□□□□ -0.66
Topbp1-201ENSMUST00000035164 Gm8138F7BY56 213 aa10.93□□□□□ -0.66
Topbp1-201ENSMUST00000035164 Gm8232F7CFJ3 213 aa10.93□□□□□ -0.66
Topbp1-201ENSMUST00000035164 Gm17079F7D8Y4 213 aa10.93□□□□□ -0.66
Topbp1-201ENSMUST00000035164 Gm8165L7N218 213 aa10.93□□□□□ -0.66
Topbp1-201ENSMUST00000035164 Vmn2r92L7N2A4 860 aa10.93□□□□□ -0.66
Topbp1-201ENSMUST00000035164 Gm8122L7N2C7 213 aa10.93□□□□□ -0.66
Topbp1-201ENSMUST00000035164 Gm17078M0QW51 211 aa10.93□□□□□ -0.66
Topbp1-201ENSMUST00000035164 Mtnd3P03899 115 aa10.93□□□□□ -0.66
Topbp1-201ENSMUST00000035164 Htr3aP23979 487 aa10.93□□□□□ -0.66
Topbp1-201ENSMUST00000035164 HmgclP38060 325 aa10.93□□□□□ -0.66
Topbp1-201ENSMUST00000035164 IduaP48441 634 aa10.93□□□□□ -0.66
Topbp1-201ENSMUST00000035164 PrlrQ08501 608 aa10.93□□□□□ -0.66
Topbp1-201ENSMUST00000035164 Esrp1Q3US41 680 aaKnown RBP10.93□□□□□ -0.66
Topbp1-201ENSMUST00000035164 Hfe2Q7TQ32 420 aa10.93□□□□□ -0.66
Topbp1-201ENSMUST00000035164 AardQ811W1 167 aa10.93□□□□□ -0.66
Topbp1-201ENSMUST00000035164 Aoc1Q8JZQ5 751 aa10.93□□□□□ -0.66
Topbp1-201ENSMUST00000035164 Creb5Q8K1L0 357 aa10.93□□□□□ -0.66
Topbp1-201ENSMUST00000035164 Asz1Q8VD46 475 aa10.93□□□□□ -0.66
Topbp1-201ENSMUST00000035164 Plpp3Q99JY8 312 aa10.93□□□□□ -0.66
Topbp1-201ENSMUST00000035164 Fuca1Q99LJ1 452 aa10.93□□□□□ -0.66
Topbp1-201ENSMUST00000035164 Ube2fQ9CY34 185 aa10.93□□□□□ -0.66
Topbp1-201ENSMUST00000035164 Pop5Q9DB28 169 aa10.93□□□□□ -0.66
Topbp1-201ENSMUST00000035164 Sertad3Q9ERC3 197 aa10.93□□□□□ -0.66
Topbp1-201ENSMUST00000035164 Vmn1r16K7N775 303 aa10.93□□□□□ -0.66
Topbp1-201ENSMUST00000035164 Olfr319L7MTY4 306 aa10.93□□□□□ -0.66
Topbp1-201ENSMUST00000035164 P01673 111 aa10.93□□□□□ -0.66
Topbp1-201ENSMUST00000035164 Apoc3P33622 99 aa10.93□□□□□ -0.66
Topbp1-201ENSMUST00000035164 Ccr7P47774 378 aa10.93□□□□□ -0.66
Topbp1-201ENSMUST00000035164 Lhx3P50481 400 aa10.93□□□□□ -0.66
Topbp1-201ENSMUST00000035164 Rps3P62908 243 aaKnown RBP10.93□□□□□ -0.66
Topbp1-201ENSMUST00000035164 Ntsr2P70310 416 aa10.93□□□□□ -0.66
Topbp1-201ENSMUST00000035164 Gch1Q05915 241 aa10.93□□□□□ -0.66
Topbp1-201ENSMUST00000035164 Gpalpp1Q69ZC8 346 aa10.93□□□□□ -0.66
Topbp1-201ENSMUST00000035164 Cd300aQ6SJQ0 318 aa10.93□□□□□ -0.66
Topbp1-201ENSMUST00000035164 Tmsb15lQ8C0W0 80 aa10.93□□□□□ -0.66
Topbp1-201ENSMUST00000035164 Sdcbp2Q99JZ0 292 aa10.93□□□□□ -0.66
Topbp1-201ENSMUST00000035164 Cacng3Q9JJV5 315 aa10.93□□□□□ -0.66
Topbp1-201ENSMUST00000035164 Gm14781A2A9Q9 366 aa10.93□□□□□ -0.66
Topbp1-201ENSMUST00000035164 Bmp7P23359 430 aa10.93□□□□□ -0.66
Topbp1-201ENSMUST00000035164 Mapkapk2P49138 386 aa10.93□□□□□ -0.66
Topbp1-201ENSMUST00000035164 Sstr4P49660 385 aa10.93□□□□□ -0.66
Topbp1-201ENSMUST00000035164 GaaP70699 953 aa10.93□□□□□ -0.66
Topbp1-201ENSMUST00000035164 Mageb5Q14AN0 366 aa10.93□□□□□ -0.66
Topbp1-201ENSMUST00000035164 Gsk3aQ2NL51 490 aa10.93□□□□□ -0.66
Topbp1-201ENSMUST00000035164 Q3TYS2 187 aa10.93□□□□□ -0.66
Topbp1-201ENSMUST00000035164 TceancQ3US16 359 aa10.93□□□□□ -0.66
Topbp1-201ENSMUST00000035164 H2-Q2Q4KN81 360 aa10.93□□□□□ -0.66
Topbp1-201ENSMUST00000035164 Tmem200aQ8C817 491 aa10.93□□□□□ -0.66
Topbp1-201ENSMUST00000035164 Irak2Q8CFA1 622 aa10.93□□□□□ -0.66
Topbp1-201ENSMUST00000035164 Gatad2aQ8CHY6 629 aaKnown RBP10.93□□□□□ -0.66
Topbp1-201ENSMUST00000035164 Padi6Q8K3V4 682 aa10.93□□□□□ -0.66
Topbp1-201ENSMUST00000035164 Ubqln5Q9D4I8 510 aa10.93□□□□□ -0.66
Topbp1-201ENSMUST00000035164 Abcb10Q9JI39 715 aa10.93□□□□□ -0.66
Topbp1-201ENSMUST00000035164 Nt5c1aA3KFX0 365 aa10.92□□□□□ -0.66
Topbp1-201ENSMUST00000035164 A430033K04RikE9Q8G5 680 aa10.92□□□□□ -0.66
Topbp1-201ENSMUST00000035164 Pou2f3P31362 431 aa10.92□□□□□ -0.66
Topbp1-201ENSMUST00000035164 TtkP35761 856 aa10.92□□□□□ -0.66
Topbp1-201ENSMUST00000035164 Rab2bP59279 216 aaKnown RBP10.92□□□□□ -0.66
Topbp1-201ENSMUST00000035164 Samd12Q0VE29 161 aa10.92□□□□□ -0.66
Topbp1-201ENSMUST00000035164 Ppp1r3eQ8BRJ4 279 aa10.92□□□□□ -0.66
Topbp1-201ENSMUST00000035164 Nlgn3Q8BYM5 825 aa10.92□□□□□ -0.66
Topbp1-201ENSMUST00000035164 Arel1Q8CHG5 823 aa10.92□□□□□ -0.66
Topbp1-201ENSMUST00000035164 Mfsd14bQ8CIA9 507 aa10.92□□□□□ -0.66
Topbp1-201ENSMUST00000035164 Atat1Q8K341 421 aa10.92□□□□□ -0.66
Topbp1-201ENSMUST00000035164 Vmp1Q99KU0 406 aa10.92□□□□□ -0.66
Topbp1-201ENSMUST00000035164 Tspan11Q9D1D1 253 aa10.92□□□□□ -0.66
Topbp1-201ENSMUST00000035164 2010005H15RikQ9D8D6 97 aa10.92□□□□□ -0.66
Topbp1-201ENSMUST00000035164 Jph3Q9ET77 744 aa10.92□□□□□ -0.66
Topbp1-201ENSMUST00000035164 Itgb6Q9Z0T9 787 aa10.92□□□□□ -0.66
Topbp1-201ENSMUST00000035164 TprnA2AI08 749 aaKnown RBP10.92□□□□□ -0.66
Topbp1-201ENSMUST00000035164 2610021A01RikE9Q0Q3 834 aa10.92□□□□□ -0.66
Topbp1-201ENSMUST00000035164 Olfr288E9Q1P2 318 aa10.92□□□□□ -0.66
Topbp1-201ENSMUST00000035164 Vmn1r31L7N2F1 303 aa10.92□□□□□ -0.66
Topbp1-201ENSMUST00000035164 Ech1O35459 327 aa10.92□□□□□ -0.66
Topbp1-201ENSMUST00000035164 Polr1cP52432 346 aaKnown RBP10.92□□□□□ -0.66
Topbp1-201ENSMUST00000035164 Aqp8P56404 261 aa10.92□□□□□ -0.66
Retrieved 100 of 22,080 RNA–protein pairs in 57.5 ms