RNA–Protein interactions for RNA: ENSMUST00000004430.13

Clcn3-201, Transcript of H(+)/Cl(-) exchange transporter 3, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Clcn3, Length 4,175 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn3-201ENSMUST00000004430 B3galt6Q91Z92 325 aa12.32□□□□□ -0.44
Clcn3-201ENSMUST00000004430 Plpp3Q99JY8 312 aa12.32□□□□□ -0.44
Clcn3-201ENSMUST00000004430 Tada1Q99LM9 335 aa12.32□□□□□ -0.44
Clcn3-201ENSMUST00000004430 Mgat4dQ9D4R2 373 aa12.32□□□□□ -0.44
Clcn3-201ENSMUST00000004430 Ppil6Q9D6D8 278 aa12.32□□□□□ -0.44
Clcn3-201ENSMUST00000004430 Glipr1l1Q9DAG6 236 aa12.32□□□□□ -0.44
Clcn3-201ENSMUST00000004430 Prokr1Q9JKL1 393 aa12.32□□□□□ -0.44
Clcn3-201ENSMUST00000004430 Tcea2Q9QVN7 299 aa12.32□□□□□ -0.44
Clcn3-201ENSMUST00000004430 Scn10aQ6QIY3 1958 aa12.31□□□□□ -0.44
Clcn3-201ENSMUST00000004430 Gm14496K7N5U4 849 aa12.31□□□□□ -0.44
Clcn3-201ENSMUST00000004430 Dnmt3bO88509 859 aa12.31□□□□□ -0.44
Clcn3-201ENSMUST00000004430 Rps13P62301 151 aaKnown RBP12.31□□□□□ -0.44
Clcn3-201ENSMUST00000004430 ChatQ03059 641 aa12.31□□□□□ -0.44
Clcn3-201ENSMUST00000004430 Gch1Q05915 241 aa12.31□□□□□ -0.44
Clcn3-201ENSMUST00000004430 Gpalpp1Q69ZC8 346 aa12.31□□□□□ -0.44
Clcn3-201ENSMUST00000004430 Alkbh2Q6P6J4 239 aa12.31□□□□□ -0.44
Clcn3-201ENSMUST00000004430 Olfr1051Q7TR76 308 aa12.31□□□□□ -0.44
Clcn3-201ENSMUST00000004430 Slc39a9Q8BFU1 308 aa12.31□□□□□ -0.44
Clcn3-201ENSMUST00000004430 Med19Q8C1S0 244 aa12.31□□□□□ -0.44
Clcn3-201ENSMUST00000004430 Bbs4Q8C1Z7 520 aa12.31□□□□□ -0.44
Clcn3-201ENSMUST00000004430 Gulp1Q8K2A1 304 aa12.31□□□□□ -0.44
Clcn3-201ENSMUST00000004430 Ahsa2Q8N9S3 331 aa12.31□□□□□ -0.44
Clcn3-201ENSMUST00000004430 Adap2Q8R2V5 381 aa12.31□□□□□ -0.44
Clcn3-201ENSMUST00000004430 Olfr575Q8VH16 318 aa12.31□□□□□ -0.44
Clcn3-201ENSMUST00000004430 Wwp2Q9DBH0 870 aa12.31□□□□□ -0.44
Clcn3-201ENSMUST00000004430 Slc6a14Q9JMA9 638 aa12.31□□□□□ -0.44
Clcn3-201ENSMUST00000004430 Ca5bQ9QZA0 317 aa12.31□□□□□ -0.44
Clcn3-201ENSMUST00000004430 Atad5Q4QY64 1826 aa12.31□□□□□ -0.44
Clcn3-201ENSMUST00000004430 Cdc6O89033 562 aaKnown RBP12.31□□□□□ -0.44
Clcn3-201ENSMUST00000004430 Sox3P53784 375 aa12.31□□□□□ -0.44
Clcn3-201ENSMUST00000004430 Entpd1P55772 510 aa12.31□□□□□ -0.44
Clcn3-201ENSMUST00000004430 Nr0b2Q62227 260 aa12.31□□□□□ -0.44
Clcn3-201ENSMUST00000004430 Znf784Q8BI69 297 aa12.31□□□□□ -0.44
Clcn3-201ENSMUST00000004430 Bend7Q8BSV3 434 aa12.31□□□□□ -0.44
Clcn3-201ENSMUST00000004430 Aifm2Q8BUE4 373 aa12.31□□□□□ -0.44
Clcn3-201ENSMUST00000004430 LaynQ8C351 381 aa12.31□□□□□ -0.44
Clcn3-201ENSMUST00000004430 H2-Q4Q8HWB2 354 aa12.31□□□□□ -0.44
Clcn3-201ENSMUST00000004430 Cdt1Q8R4E9 557 aa12.31□□□□□ -0.44
Clcn3-201ENSMUST00000004430 Pcdhga11Q91XY8 933 aa12.31□□□□□ -0.44
Clcn3-201ENSMUST00000004430 Ppp1r16aQ923M0 524 aa12.31□□□□□ -0.44
Clcn3-201ENSMUST00000004430 Yaf2Q99LW6 179 aa12.31□□□□□ -0.44
Clcn3-201ENSMUST00000004430 Metap1dQ9CPW9 335 aa12.31□□□□□ -0.44
Clcn3-201ENSMUST00000004430 Bcl7aQ9CXE2 210 aa12.31□□□□□ -0.44
Clcn3-201ENSMUST00000004430 MmabQ9D273 237 aa12.31□□□□□ -0.44
Clcn3-201ENSMUST00000004430 Asb4Q9WV71 426 aa12.31□□□□□ -0.44
Clcn3-201ENSMUST00000004430 Zgrf1Q0VGT4 1863 aa12.31□□□□□ -0.44
Clcn3-201ENSMUST00000004430 Vmn2r90E9PXJ8 863 aa12.31□□□□□ -0.44
Clcn3-201ENSMUST00000004430 Vmn2r97K7N6Z2 861 aa12.31□□□□□ -0.44
Clcn3-201ENSMUST00000004430 Vmn2r93L7N1Z9 857 aa12.31□□□□□ -0.44
Clcn3-201ENSMUST00000004430 Clk3O35492 638 aa12.31□□□□□ -0.44
Clcn3-201ENSMUST00000004430 Dmp1O55188 503 aa12.31□□□□□ -0.44
Clcn3-201ENSMUST00000004430 Grik2P39087 908 aa12.31□□□□□ -0.44
Clcn3-201ENSMUST00000004430 Nsg2P47759 171 aa12.31□□□□□ -0.44
Clcn3-201ENSMUST00000004430 Rrm2bQ6PEE3 351 aa12.31□□□□□ -0.44
Clcn3-201ENSMUST00000004430 Scgb2b2Q6UGQ3 114 aa12.31□□□□□ -0.44
Clcn3-201ENSMUST00000004430 BpifcQ8C186 509 aa12.31□□□□□ -0.44
Clcn3-201ENSMUST00000004430 Grsf1Q8C5Q4 479 aaKnown RBP12.31□□□□□ -0.44
Clcn3-201ENSMUST00000004430 Hist1h2aaQ8CGP4 129 aa12.31□□□□□ -0.44
Clcn3-201ENSMUST00000004430 Mtrf1Q8K126 446 aa12.31□□□□□ -0.44
Clcn3-201ENSMUST00000004430 Pdzd3Q99MJ6 498 aa12.31□□□□□ -0.44
Clcn3-201ENSMUST00000004430 4931417E11RikQ9CR05 305 aa12.31□□□□□ -0.44
Clcn3-201ENSMUST00000004430 EcdQ9CS74 641 aa12.31□□□□□ -0.44
Clcn3-201ENSMUST00000004430 Erp27Q9D8U3 272 aa12.31□□□□□ -0.44
Clcn3-201ENSMUST00000004430 Unc13cQ8K0T7 2210 aa12.31□□□□□ -0.44
Clcn3-201ENSMUST00000004430 Fam71f2B2RXB0 297 aa12.3□□□□□ -0.44
Clcn3-201ENSMUST00000004430 Kcnj1O88335 372 aa12.3□□□□□ -0.44
Clcn3-201ENSMUST00000004430 Mtx2O88441 263 aa12.3□□□□□ -0.44
Clcn3-201ENSMUST00000004430 Pax3P24610 479 aa12.3□□□□□ -0.44
Clcn3-201ENSMUST00000004430 HmgclP38060 325 aa12.3□□□□□ -0.44
Clcn3-201ENSMUST00000004430 Cav3P51637 151 aa12.3□□□□□ -0.44
Clcn3-201ENSMUST00000004430 Art5P70352 309 aa12.3□□□□□ -0.44
Clcn3-201ENSMUST00000004430 Mmp11Q02853 492 aa12.3□□□□□ -0.44
Clcn3-201ENSMUST00000004430 Pdss2Q33DR3 401 aa12.3□□□□□ -0.44
Clcn3-201ENSMUST00000004430 Elmod1Q3V1U8 326 aa12.3□□□□□ -0.44
Clcn3-201ENSMUST00000004430 Nfatc2Q60591 927 aa12.3□□□□□ -0.44
Clcn3-201ENSMUST00000004430 Serpinf2Q61247 491 aa12.3□□□□□ -0.44
Clcn3-201ENSMUST00000004430 Olfr1015Q7TR94 312 aa12.3□□□□□ -0.44
Clcn3-201ENSMUST00000004430 Mrps7Q80X85 242 aaKnown RBP12.3□□□□□ -0.44
Clcn3-201ENSMUST00000004430 Ctdsp2Q8BX07 270 aa12.3□□□□□ -0.44
Clcn3-201ENSMUST00000004430 Lacc1Q8BZT9 430 aa12.3□□□□□ -0.44
Clcn3-201ENSMUST00000004430 Olfr846Q8VET8 312 aa12.3□□□□□ -0.44
Clcn3-201ENSMUST00000004430 MrgpreQ91ZB7 310 aa12.3□□□□□ -0.44
Clcn3-201ENSMUST00000004430 Mrps15Q9DC71 258 aaKnown RBP12.3□□□□□ -0.44
Clcn3-201ENSMUST00000004430 Hcar2Q9EP66 360 aa12.3□□□□□ -0.44
Clcn3-201ENSMUST00000004430 Vmn1r29Q9EQ41 303 aa12.3□□□□□ -0.44
Clcn3-201ENSMUST00000004430 CntrlA2AL36 2334 aa12.3□□□□□ -0.44
Clcn3-201ENSMUST00000004430 Gm43951A0A0N4SUT6 962 aa12.3□□□□□ -0.44
Clcn3-201ENSMUST00000004430 Olfr396-ps1A0A0U1RNF5 211 aa12.3□□□□□ -0.44
Clcn3-201ENSMUST00000004430 Nt5c1aA3KFX0 365 aa12.3□□□□□ -0.44
Clcn3-201ENSMUST00000004430 H60cB1B213 197 aa12.3□□□□□ -0.44
Clcn3-201ENSMUST00000004430 Lrr1D3YY91 422 aa12.3□□□□□ -0.44
Clcn3-201ENSMUST00000004430 Ybx1P62960 322 aaKnown RBP12.3□□□□□ -0.44
Clcn3-201ENSMUST00000004430 Ap2m1P84091 435 aaKnown RBP12.3□□□□□ -0.44
Clcn3-201ENSMUST00000004430 Ankdd1bQ14DN9 521 aa12.3□□□□□ -0.44
Clcn3-201ENSMUST00000004430 ClpbQ60649 677 aa12.3□□□□□ -0.44
Clcn3-201ENSMUST00000004430 MylipQ8BM54 445 aa12.3□□□□□ -0.44
Clcn3-201ENSMUST00000004430 PpcdcQ8BZB2 204 aa12.3□□□□□ -0.44
Clcn3-201ENSMUST00000004430 Kctd2Q8CEZ0 266 aa12.3□□□□□ -0.44
Clcn3-201ENSMUST00000004430 Tmem125Q8CHQ6 216 aa12.3□□□□□ -0.44
Clcn3-201ENSMUST00000004430 HopxQ8R1H0 73 aa12.3□□□□□ -0.44
Retrieved 100 of 22,080 RNA–protein pairs in 35.4 ms