RNA–Protein interactions for RNA: ENSMUST00000003857.6

Shkbp1-201, Transcript of SH3KBP1-binding protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Shkbp1, Length 2,358 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shkbp1-201ENSMUST00000003857 Phf24Q80TL4 400 aa18.03■□□□□ 0.48
Shkbp1-201ENSMUST00000003857 Trim50Q810I2 483 aa18.03■□□□□ 0.48
Shkbp1-201ENSMUST00000003857 Fam131aQ8BWU3 361 aa18.03■□□□□ 0.48
Shkbp1-201ENSMUST00000003857 Nt5dc1Q8C5P5 467 aa18.03■□□□□ 0.48
Shkbp1-201ENSMUST00000003857 McatQ8R3F5 381 aaKnown RBP18.03■□□□□ 0.48
Shkbp1-201ENSMUST00000003857 Olfr342Q8VGK7 312 aa18.03■□□□□ 0.48
Shkbp1-201ENSMUST00000003857 Dlg2Q91XM9 852 aa18.03■□□□□ 0.48
Shkbp1-201ENSMUST00000003857 Elmod3Q91YP6 381 aa18.03■□□□□ 0.48
Shkbp1-201ENSMUST00000003857 9230112D13RikQ9D260 137 aa18.03■□□□□ 0.48
Shkbp1-201ENSMUST00000003857 Mrpl46Q9EQI8 283 aa18.03■□□□□ 0.48
Shkbp1-201ENSMUST00000003857 Trgv2A2J008 116 aa18.02■□□□□ 0.48
Shkbp1-201ENSMUST00000003857 Glyatl3E9Q5L8 290 aa18.02■□□□□ 0.48
Shkbp1-201ENSMUST00000003857 Gm44G3UW88 330 aa18.02■□□□□ 0.48
Shkbp1-201ENSMUST00000003857 Kpna3O35344 521 aa18.02■□□□□ 0.48
Shkbp1-201ENSMUST00000003857 Tssk2O54863 358 aa18.02■□□□□ 0.48
Shkbp1-201ENSMUST00000003857 Lingo4Q149C3 593 aa18.02■□□□□ 0.48
Shkbp1-201ENSMUST00000003857 Dmrtc1bQ2PMX6 267 aa18.02■□□□□ 0.48
Shkbp1-201ENSMUST00000003857 Srek1ip1Q4V9W2 153 aa18.02■□□□□ 0.48
Shkbp1-201ENSMUST00000003857 Ankrd28Q505D1 1053 aa18.02■□□□□ 0.48
Shkbp1-201ENSMUST00000003857 Gpalpp1Q69ZC8 346 aa18.02■□□□□ 0.48
Shkbp1-201ENSMUST00000003857 Olfr1045Q7TR80 315 aa18.02■□□□□ 0.48
Shkbp1-201ENSMUST00000003857 Nod1Q8BHB0 953 aa18.02■□□□□ 0.48
Shkbp1-201ENSMUST00000003857 Lrrtm3Q8BZ81 582 aa18.02■□□□□ 0.48
Shkbp1-201ENSMUST00000003857 Bpifb2Q8C1E1 462 aa18.02■□□□□ 0.48
Shkbp1-201ENSMUST00000003857 Oard1Q8R5F3 152 aa18.02■□□□□ 0.48
Shkbp1-201ENSMUST00000003857 Cxxc5Q91WA4 317 aaKnown RBP18.02■□□□□ 0.48
Shkbp1-201ENSMUST00000003857 Trim33Q99PP7 1142 aa18.02■□□□□ 0.48
Shkbp1-201ENSMUST00000003857 Slc25a13Q9QXX4 676 aa18.02■□□□□ 0.48
Shkbp1-201ENSMUST00000003857 Slc35a2Q9R0M8 390 aa18.02■□□□□ 0.48
Shkbp1-201ENSMUST00000003857 Tdrd6P61407 2134 aa18.02■□□□□ 0.48
Shkbp1-201ENSMUST00000003857 Vmn1r25H3BLP0 302 aa18.02■□□□□ 0.47
Shkbp1-201ENSMUST00000003857 Psmc3ipO35047 217 aa18.02■□□□□ 0.47
Shkbp1-201ENSMUST00000003857 Lrrc23O35125 340 aa18.02■□□□□ 0.47
Shkbp1-201ENSMUST00000003857 HpnO35453 436 aa18.02■□□□□ 0.47
Shkbp1-201ENSMUST00000003857 Tuba1bP05213 451 aa18.02■□□□□ 0.47
Shkbp1-201ENSMUST00000003857 PfklP12382 780 aa18.02■□□□□ 0.47
Shkbp1-201ENSMUST00000003857 Tia1P52912 386 aaKnown RBP18.02■□□□□ 0.47
Shkbp1-201ENSMUST00000003857 Tuba1aP68369 451 aa18.02■□□□□ 0.47
Shkbp1-201ENSMUST00000003857 MedagQ14BA6 303 aa18.02■□□□□ 0.47
Shkbp1-201ENSMUST00000003857 Tas2r38Q7TQA6 331 aa18.02■□□□□ 0.47
Shkbp1-201ENSMUST00000003857 Olfr561Q8VGZ6 314 aa18.02■□□□□ 0.47
Shkbp1-201ENSMUST00000003857 Slc2a10Q8VHD6 536 aa18.02■□□□□ 0.47
Shkbp1-201ENSMUST00000003857 Slc25a37Q920G8 338 aa18.02■□□□□ 0.47
Shkbp1-201ENSMUST00000003857 Ccdc77Q9CZH8 489 aa18.02■□□□□ 0.47
Shkbp1-201ENSMUST00000003857 Stx11Q9D3G5 287 aa18.02■□□□□ 0.47
Shkbp1-201ENSMUST00000003857 Q9D4W2 315 aa18.02■□□□□ 0.47
Shkbp1-201ENSMUST00000003857 Fads2Q9Z0R9 444 aaKnown RBP18.02■□□□□ 0.47
Shkbp1-201ENSMUST00000003857 A0A286YDU1 74 aa18.01■□□□□ 0.47
Shkbp1-201ENSMUST00000003857 Xlr5bA2BI50 236 aa18.01■□□□□ 0.47
Shkbp1-201ENSMUST00000003857 Tmem215A7E1Z1 235 aa18.01■□□□□ 0.47
Shkbp1-201ENSMUST00000003857 Gm10639E9Q6L7 222 aa18.01■□□□□ 0.47
Shkbp1-201ENSMUST00000003857 Arhgap40E9Q6X9 672 aa18.01■□□□□ 0.47
Shkbp1-201ENSMUST00000003857 Gm6356L7N2A7 188 aa18.01■□□□□ 0.47
Shkbp1-201ENSMUST00000003857 Fzd1O70421 642 aa18.01■□□□□ 0.47
Shkbp1-201ENSMUST00000003857 Capns1O88456 269 aa18.01■□□□□ 0.47
Shkbp1-201ENSMUST00000003857 H2-D1P14427 368 aa18.01■□□□□ 0.47
Shkbp1-201ENSMUST00000003857 Ica1P97411 478 aa18.01■□□□□ 0.47
Shkbp1-201ENSMUST00000003857 Dusp5Q1HL35 384 aa18.01■□□□□ 0.47
Shkbp1-201ENSMUST00000003857 Fam167aQ6P1G6 215 aa18.01■□□□□ 0.47
Shkbp1-201ENSMUST00000003857 Mapre3Q6PER3 281 aa18.01■□□□□ 0.47
Shkbp1-201ENSMUST00000003857 Olfr1307Q7TQX1 312 aa18.01■□□□□ 0.47
Shkbp1-201ENSMUST00000003857 Zc2hc1cQ8CCG1 527 aa18.01■□□□□ 0.47
Shkbp1-201ENSMUST00000003857 ZwilchQ8R060 589 aa18.01■□□□□ 0.47
Shkbp1-201ENSMUST00000003857 Dnase1l2Q9D1G0 278 aa18.01■□□□□ 0.47
Shkbp1-201ENSMUST00000003857 Enpp2Q9R1E6 862 aa18.01■□□□□ 0.47
Shkbp1-201ENSMUST00000003857 Scgb2b17S4R2V3 82 aa18.01■□□□□ 0.47
Shkbp1-201ENSMUST00000003857 Gm42688A0A0R3P9D1 673 aa18.01■□□□□ 0.47
Shkbp1-201ENSMUST00000003857 Olfr287E9PZS7 322 aa18.01■□□□□ 0.47
Shkbp1-201ENSMUST00000003857 Maml2F6U238 1170 aa18.01■□□□□ 0.47
Shkbp1-201ENSMUST00000003857 Hax1O35387 280 aa18.01■□□□□ 0.47
Shkbp1-201ENSMUST00000003857 Arl6O88848 186 aa18.01■□□□□ 0.47
Shkbp1-201ENSMUST00000003857 Cyb5r4Q3TDX8 528 aa18.01■□□□□ 0.47
Shkbp1-201ENSMUST00000003857 Runx1t1Q61909 577 aa18.01■□□□□ 0.47
Shkbp1-201ENSMUST00000003857 Ablim3Q69ZX8 682 aa18.01■□□□□ 0.47
Shkbp1-201ENSMUST00000003857 Gjc2Q8BQU6 440 aa18.01■□□□□ 0.47
Shkbp1-201ENSMUST00000003857 Peli2Q8BST6 419 aa18.01■□□□□ 0.47
Shkbp1-201ENSMUST00000003857 Gpr26Q8BZA7 337 aa18.01■□□□□ 0.47
Shkbp1-201ENSMUST00000003857 Spin4Q8K1L2 249 aa18.01■□□□□ 0.47
Shkbp1-201ENSMUST00000003857 Cops8Q8VBV7 209 aa18.01■□□□□ 0.47
Shkbp1-201ENSMUST00000003857 NoboxQ8VIH1 527 aa18.01■□□□□ 0.47
Shkbp1-201ENSMUST00000003857 Mthfd1Q922D8 935 aa18.01■□□□□ 0.47
Shkbp1-201ENSMUST00000003857 Olfr71Q9QZ18 312 aa18.01■□□□□ 0.47
Shkbp1-201ENSMUST00000003857 Scamp3O35609 349 aa18■□□□□ 0.47
Shkbp1-201ENSMUST00000003857 Mup4P11590 178 aa18■□□□□ 0.47
Shkbp1-201ENSMUST00000003857 GypaP14220 168 aa18■□□□□ 0.47
Shkbp1-201ENSMUST00000003857 Aldh1a1P24549 501 aa18■□□□□ 0.47
Shkbp1-201ENSMUST00000003857 Mrps6P58064 125 aa18■□□□□ 0.47
Shkbp1-201ENSMUST00000003857 Rps13P62301 151 aaKnown RBP18■□□□□ 0.47
Shkbp1-201ENSMUST00000003857 Polr2lP62876 67 aa18■□□□□ 0.47
Shkbp1-201ENSMUST00000003857 Adra1aP97718 466 aa18■□□□□ 0.47
Shkbp1-201ENSMUST00000003857 Scgb1a1Q06318 96 aa18■□□□□ 0.47
Shkbp1-201ENSMUST00000003857 Kcna7Q17ST2 489 aa18■□□□□ 0.47
Shkbp1-201ENSMUST00000003857 Cpxcr1Q3V0P1 322 aa18■□□□□ 0.47
Shkbp1-201ENSMUST00000003857 RasefQ5RI75 627 aa18■□□□□ 0.47
Shkbp1-201ENSMUST00000003857 Gramd2bQ6PEM6 445 aa18■□□□□ 0.47
Shkbp1-201ENSMUST00000003857 Med26Q7TN02 588 aa18■□□□□ 0.47
Shkbp1-201ENSMUST00000003857 GalpQ810H5 117 aa18■□□□□ 0.47
Shkbp1-201ENSMUST00000003857 Cstf2Q8BIQ5 580 aaKnown RBP18■□□□□ 0.47
Shkbp1-201ENSMUST00000003857 Gpc2Q8BKV1 579 aa18■□□□□ 0.47
Shkbp1-201ENSMUST00000003857 Q8BL95 290 aa18■□□□□ 0.47
Retrieved 100 of 22,080 RNA–protein pairs in 28.7 ms