RNA–Protein interactions for RNA: ENST00000641213.1

PHGDH-211, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,053 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-211ENST00000641213 RIBC2Q9H4K1 309 aa16.34■□□□□ 0.21
PHGDH-211ENST00000641213 REEP1Q9H902 201 aa16.34■□□□□ 0.21
PHGDH-211ENST00000641213 TAC3Q9UHF0 121 aa16.34■□□□□ 0.21
PHGDH-211ENST00000641213 STON1Q9Y6Q2 735 aa16.34■□□□□ 0.21
PHGDH-211ENST00000641213 REV3LO60673 3130 aa16.34■□□□□ 0.21
PHGDH-211ENST00000641213 SLC1A7O00341 560 aa16.34■□□□□ 0.21
PHGDH-211ENST00000641213 DPM1O60762 260 aa16.34■□□□□ 0.21
PHGDH-211ENST00000641213 TBX6O95947 436 aaPredicted RBP16.34■□□□□ 0.21
PHGDH-211ENST00000641213 IL3P08700 152 aa16.34■□□□□ 0.21
PHGDH-211ENST00000641213 MATN1P21941 496 aa16.34■□□□□ 0.21
PHGDH-211ENST00000641213 CLK3P49761 638 aaKnown RBP16.34■□□□□ 0.21
PHGDH-211ENST00000641213 NUP107P57740 925 aa16.34■□□□□ 0.21
PHGDH-211ENST00000641213 IL1RL1Q01638 556 aa16.34■□□□□ 0.21
PHGDH-211ENST00000641213 CDK5R2Q13319 367 aa16.34■□□□□ 0.21
PHGDH-211ENST00000641213 SIM2Q14190 667 aaPredicted RBP16.34■□□□□ 0.21
PHGDH-211ENST00000641213 ARHGAP19Q14CB8 494 aa16.34■□□□□ 0.21
PHGDH-211ENST00000641213 SLC9B2Q86UD5 537 aa16.34■□□□□ 0.21
PHGDH-211ENST00000641213 PHF6Q8IWS0 365 aaKnown RBP eCLIP16.34■□□□□ 0.21
PHGDH-211ENST00000641213 OR52N2Q8NGI0 321 aa16.34■□□□□ 0.21
PHGDH-211ENST00000641213 MBNL1Q9NR56 388 aaKnown RBP16.34■□□□□ 0.21
PHGDH-211ENST00000641213 DNMT3AQ9Y6K1 912 aaPredicted RBP16.34■□□□□ 0.21
PHGDH-211ENST00000641213 JRKO75564 520 aa16.33■□□□□ 0.21
PHGDH-211ENST00000641213 CYP4B1P13584 511 aa16.33■□□□□ 0.21
PHGDH-211ENST00000641213 TPP2P29144 1249 aaPredicted RBP16.33■□□□□ 0.21
PHGDH-211ENST00000641213 SELENOWP63302 87 aa16.33■□□□□ 0.21
PHGDH-211ENST00000641213 PIGFQ07326 219 aa16.33■□□□□ 0.21
PHGDH-211ENST00000641213 TUBA3CQ13748 450 aa16.33■□□□□ 0.21
PHGDH-211ENST00000641213 CST6Q15828 149 aa16.33■□□□□ 0.21
PHGDH-211ENST00000641213 IKBIPQ70UQ0 350 aa16.33■□□□□ 0.21
PHGDH-211ENST00000641213 MMP21Q8N119 569 aa16.33■□□□□ 0.21
PHGDH-211ENST00000641213 CNIH3Q8TBE1 160 aa16.33■□□□□ 0.21
PHGDH-211ENST00000641213 DCUN1D5Q9BTE7 237 aa16.33■□□□□ 0.21
PHGDH-211ENST00000641213 MENTQ9BUN1 341 aa16.33■□□□□ 0.21
PHGDH-211ENST00000641213 LHPPQ9H008 270 aa16.33■□□□□ 0.21
PHGDH-211ENST00000641213 RHBGQ9H310 441 aa16.33■□□□□ 0.21
PHGDH-211ENST00000641213 OCEL1Q9H607 264 aa16.33■□□□□ 0.21
PHGDH-211ENST00000641213 THUMPD1Q9NXG2 353 aaKnown RBP16.33■□□□□ 0.21
PHGDH-211ENST00000641213 TAS2R9Q9NYW1 312 aa16.33■□□□□ 0.21
PHGDH-211ENST00000641213 PADI2Q9Y2J8 665 aa16.33■□□□□ 0.21
PHGDH-211ENST00000641213 YBX2Q9Y2T7 364 aaKnown RBP16.33■□□□□ 0.21
PHGDH-211ENST00000641213 TRIM64BA6NI03 449 aa16.33■□□□□ 0.2
PHGDH-211ENST00000641213 TMX2-CTNND1H3BSU7 103 aa16.33■□□□□ 0.2
PHGDH-211ENST00000641213 RPN2P04844 631 aa16.33■□□□□ 0.2
PHGDH-211ENST00000641213 RPS6KA3P51812 740 aa16.33■□□□□ 0.2
PHGDH-211ENST00000641213 IL5RAQ01344 420 aa16.33■□□□□ 0.2
PHGDH-211ENST00000641213 KEAP1Q14145 624 aa16.33■□□□□ 0.2
PHGDH-211ENST00000641213 GCNT6Q5T4J0 391 aa16.33■□□□□ 0.2
PHGDH-211ENST00000641213 DHRS4L2Q6PKH6 230 aa16.33■□□□□ 0.2
PHGDH-211ENST00000641213 TSEN54Q7Z6J9 526 aaKnown RBP16.33■□□□□ 0.2
PHGDH-211ENST00000641213 SETD9Q8NE22 299 aa16.33■□□□□ 0.2
PHGDH-211ENST00000641213 EPYCQ99645 322 aa16.33■□□□□ 0.2
PHGDH-211ENST00000641213 TEX101Q9BY14 249 aa16.33■□□□□ 0.2
PHGDH-211ENST00000641213 SLC6A16Q9GZN6 736 aa16.33■□□□□ 0.2
PHGDH-211ENST00000641213 RSPH9Q9H1X1 276 aaPredicted RBP16.33■□□□□ 0.2
PHGDH-211ENST00000641213 IGFLR1Q9H665 355 aa16.33■□□□□ 0.2
PHGDH-211ENST00000641213 PELI2Q9HAT8 420 aa16.33■□□□□ 0.2
PHGDH-211ENST00000641213 C1GALT1Q9NS00 363 aa16.33■□□□□ 0.2
PHGDH-211ENST00000641213 CUEDC1Q9NWM3 386 aaPredicted RBP16.33■□□□□ 0.2
PHGDH-211ENST00000641213 PAK1IP1Q9NWT1 392 aaPredicted RBP16.33■□□□□ 0.2
PHGDH-211ENST00000641213 TMEM9Q9P0T7 183 aa16.33■□□□□ 0.2
PHGDH-211ENST00000641213 SERGEFQ9UGK8 458 aa16.33■□□□□ 0.2
PHGDH-211ENST00000641213 ACSL6Q9UKU0 697 aa16.33■□□□□ 0.2
PHGDH-211ENST00000641213 A0A1W2PRB8 838 aa16.32■□□□□ 0.2
PHGDH-211ENST00000641213 ANKDD1BA6NHY2 528 aa16.32■□□□□ 0.2
PHGDH-211ENST00000641213 PLPP1O14494 284 aa16.32■□□□□ 0.2
PHGDH-211ENST00000641213 KMOO15229 486 aa16.32■□□□□ 0.2
PHGDH-211ENST00000641213 C9P02748 559 aa16.32■□□□□ 0.2
PHGDH-211ENST00000641213 CALRP27797 417 aaKnown RBP16.32■□□□□ 0.2
PHGDH-211ENST00000641213 FADDQ13158 208 aa16.32■□□□□ 0.2
PHGDH-211ENST00000641213 SLC5A12Q1EHB4 618 aa16.32■□□□□ 0.2
PHGDH-211ENST00000641213 GTF2IRD2BQ6EKJ0 949 aa16.32■□□□□ 0.2
PHGDH-211ENST00000641213 FAHD1Q6P587 224 aa16.32■□□□□ 0.2
PHGDH-211ENST00000641213 GTF2IRD2Q86UP8 949 aa16.32■□□□□ 0.2
PHGDH-211ENST00000641213 YAF2Q8IY57 180 aa16.32■□□□□ 0.2
PHGDH-211ENST00000641213 ANKRD53Q8N9V6 530 aa16.32■□□□□ 0.2
PHGDH-211ENST00000641213 TTC29Q8NA56 475 aaPredicted RBP16.32■□□□□ 0.2
PHGDH-211ENST00000641213 BPIFB6Q8NFQ5 453 aa16.32■□□□□ 0.2
PHGDH-211ENST00000641213 OR5AK3PQ8NH89 298 aa16.32■□□□□ 0.2
PHGDH-211ENST00000641213 GAB3Q8WWW8 586 aa16.32■□□□□ 0.2
PHGDH-211ENST00000641213 ZNF566Q969W8 418 aa16.32■□□□□ 0.2
PHGDH-211ENST00000641213 MYOCQ99972 504 aa16.32■□□□□ 0.2
PHGDH-211ENST00000641213 ZNF717Q9BY31 904 aaPredicted RBP16.32■□□□□ 0.2
PHGDH-211ENST00000641213 WASH6PQ9NQA3 447 aa16.32■□□□□ 0.2
PHGDH-211ENST00000641213 TAAR2Q9P1P5 351 aa16.32■□□□□ 0.2
PHGDH-211ENST00000641213 OR1A2Q9Y585 309 aa16.32■□□□□ 0.2
PHGDH-211ENST00000641213 OPN1SWP03999 348 aa16.31■□□□□ 0.2
PHGDH-211ENST00000641213 CCDC159P0C7I6 412 aa16.31■□□□□ 0.2
PHGDH-211ENST00000641213 PSMB5P28074 263 aa16.31■□□□□ 0.2
PHGDH-211ENST00000641213 CHI3L1P36222 383 aaPredicted RBP16.31■□□□□ 0.2
PHGDH-211ENST00000641213 HSD17B2P37059 387 aa16.31■□□□□ 0.2
PHGDH-211ENST00000641213 EIF2DP41214 584 aaKnown RBP16.31■□□□□ 0.2
PHGDH-211ENST00000641213 TMBIM6P55061 237 aa16.31■□□□□ 0.2
PHGDH-211ENST00000641213 RBBP4Q09028 425 aa16.31■□□□□ 0.2
PHGDH-211ENST00000641213 ENPP2Q13822 863 aa16.31■□□□□ 0.2
PHGDH-211ENST00000641213 SCARB2Q14108 478 aa16.31■□□□□ 0.2
PHGDH-211ENST00000641213 AGERQ15109 404 aa16.31■□□□□ 0.2
PHGDH-211ENST00000641213 C2orf27AQ580R0 203 aa16.31■□□□□ 0.2
PHGDH-211ENST00000641213 DEPDC1Q5TB30 811 aa16.31■□□□□ 0.2
PHGDH-211ENST00000641213 KHDRBS2Q5VWX1 349 aaKnown RBP16.31■□□□□ 0.2
PHGDH-211ENST00000641213 RNF130Q86XS8 419 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms