RNA–Protein interactions for RNA: ENST00000638959.1

LMBR1-222, Transcript of limb development membrane protein 1, humanhuman

TSL 5 BASIC

Gene LMBR1, Length 93 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-222ENST00000638959 TMEM115Q12893 351 aaPredicted RBP-0.21□□□□□ -2.44
LMBR1-222ENST00000638959 PTP4A2Q12974 167 aa-0.21□□□□□ -2.44
LMBR1-222ENST00000638959 PRKG2Q13237 762 aa-0.21□□□□□ -2.44
LMBR1-222ENST00000638959 ASAH1Q13510 395 aa-0.21□□□□□ -2.44
LMBR1-222ENST00000638959 OPCMLQ14982 345 aa-0.21□□□□□ -2.44
LMBR1-222ENST00000638959 KRTAP21-1Q3LI58 79 aa-0.21□□□□□ -2.44
LMBR1-222ENST00000638959 SPANXN4Q5MJ08 99 aa-0.21□□□□□ -2.44
LMBR1-222ENST00000638959 FAM69AQ5T7M9 428 aa-0.21□□□□□ -2.44
LMBR1-222ENST00000638959 SASS6Q6UVJ0 657 aa-0.21□□□□□ -2.44
LMBR1-222ENST00000638959 SCYL3Q8IZE3 742 aa-0.21□□□□□ -2.44
LMBR1-222ENST00000638959 TTC5Q8N0Z6 440 aa-0.21□□□□□ -2.44
LMBR1-222ENST00000638959 NDUFAF2Q8N183 169 aa-0.21□□□□□ -2.44
LMBR1-222ENST00000638959 OR4K1Q8NGD4 311 aa-0.21□□□□□ -2.44
LMBR1-222ENST00000638959 CASP10Q92851 521 aa-0.21□□□□□ -2.44
LMBR1-222ENST00000638959 ELMOD3Q96FG2 381 aa-0.21□□□□□ -2.44
LMBR1-222ENST00000638959 SLC35E1Q96K37 410 aa-0.21□□□□□ -2.44
LMBR1-222ENST00000638959 UBXN10Q96LJ8 280 aa-0.21□□□□□ -2.44
LMBR1-222ENST00000638959 NEDD4LQ96PU5 975 aa-0.21□□□□□ -2.44
LMBR1-222ENST00000638959 ALKBH3Q96Q83 286 aaPredicted RBP-0.21□□□□□ -2.44
LMBR1-222ENST00000638959 PLEKHF1Q96S99 279 aa-0.21□□□□□ -2.44
LMBR1-222ENST00000638959 CDCA3Q99618 268 aaPredicted RBP-0.21□□□□□ -2.44
LMBR1-222ENST00000638959 POLR1BQ9H9Y6 1135 aa-0.21□□□□□ -2.44
LMBR1-222ENST00000638959 Q9N2K0 584 aa-0.21□□□□□ -2.44
LMBR1-222ENST00000638959 SETD4Q9NVD3 440 aa-0.21□□□□□ -2.44
LMBR1-222ENST00000638959 APOBEC3BQ9UH17 382 aaKnown RBP-0.21□□□□□ -2.44
LMBR1-222ENST00000638959 HACL1Q9UJ83 578 aa-0.21□□□□□ -2.44
LMBR1-222ENST00000638959 ZNF221Q9UK13 617 aa-0.21□□□□□ -2.44
LMBR1-222ENST00000638959 ZNF469Q96JG9 3925 aaPredicted RBP-0.21□□□□□ -2.44
LMBR1-222ENST00000638959 RAI1Q7Z5J4 1906 aaPredicted RBP-0.21□□□□□ -2.44
LMBR1-222ENST00000638959 RRN3P2A6NIE6 340 aa-0.22□□□□□ -2.44
LMBR1-222ENST00000638959 C2CD4DB7Z1M9 353 aa-0.22□□□□□ -2.44
LMBR1-222ENST00000638959 OR2T7P0C7T2 308 aa-0.22□□□□□ -2.44
LMBR1-222ENST00000638959 IGFBP3P17936 291 aaPredicted RBP-0.22□□□□□ -2.44
LMBR1-222ENST00000638959 CETN2P41208 172 aa-0.22□□□□□ -2.44
LMBR1-222ENST00000638959 SLC1A6P48664 564 aa-0.22□□□□□ -2.44
LMBR1-222ENST00000638959 VAMP7P51809 220 aa-0.22□□□□□ -2.44
LMBR1-222ENST00000638959 MAT1AQ00266 395 aaKnown RBP-0.22□□□□□ -2.44
LMBR1-222ENST00000638959 PDE7AQ13946 482 aa-0.22□□□□□ -2.44
LMBR1-222ENST00000638959 IQCCQ4KMZ1 466 aa-0.22□□□□□ -2.44
LMBR1-222ENST00000638959 C5orf47Q569G3 176 aa-0.22□□□□□ -2.44
LMBR1-222ENST00000638959 PAGE2BQ5JRK9 111 aa-0.22□□□□□ -2.44
LMBR1-222ENST00000638959 OR4A47Q6IF82 309 aa-0.22□□□□□ -2.44
LMBR1-222ENST00000638959 IL34Q6ZMJ4 242 aa-0.22□□□□□ -2.44
LMBR1-222ENST00000638959 TMEM179BQ7Z7N9 219 aa-0.22□□□□□ -2.44
LMBR1-222ENST00000638959 MYLK4Q86YV6 388 aaPredicted RBP-0.22□□□□□ -2.44
LMBR1-222ENST00000638959 ADGRF2Q8IZF7 708 aa-0.22□□□□□ -2.44
LMBR1-222ENST00000638959 XXYLT1Q8NBI6 393 aa-0.22□□□□□ -2.44
LMBR1-222ENST00000638959 SPATA17Q96L03 361 aa-0.22□□□□□ -2.44
LMBR1-222ENST00000638959 KLHL5Q96PQ7 755 aa-0.22□□□□□ -2.44
LMBR1-222ENST00000638959 BTBD9Q96Q07 612 aa-0.22□□□□□ -2.44
LMBR1-222ENST00000638959 NR1H4Q96RI1 486 aaPredicted RBP-0.22□□□□□ -2.44
LMBR1-222ENST00000638959 GPR63Q9BZJ6 419 aa-0.22□□□□□ -2.44
LMBR1-222ENST00000638959 NXF3Q9H4D5 531 aaKnown RBP-0.22□□□□□ -2.44
LMBR1-222ENST00000638959 ZNF702PQ9H963 129 aa-0.22□□□□□ -2.44
LMBR1-222ENST00000638959 C3orf14Q9HBI5 128 aa-0.22□□□□□ -2.44
LMBR1-222ENST00000638959 AMBNQ9NP70 447 aa-0.22□□□□□ -2.44
LMBR1-222ENST00000638959 PAG1Q9NWQ8 432 aa-0.22□□□□□ -2.44
LMBR1-222ENST00000638959 PDP2Q9P2J9 529 aa-0.22□□□□□ -2.44
LMBR1-222ENST00000638959 NENFQ9UMX5 172 aa-0.22□□□□□ -2.44
LMBR1-222ENST00000638959 NIP7Q9Y221 180 aaKnown RBP eCLIP-0.22□□□□□ -2.44
LMBR1-222ENST00000638959 RNF24Q9Y225 148 aa-0.22□□□□□ -2.44
LMBR1-222ENST00000638959 NME7Q9Y5B8 376 aa-0.22□□□□□ -2.44
LMBR1-222ENST00000638959 IGLV8-61A0A075B6I0 122 aa-0.23□□□□□ -2.45
LMBR1-222ENST00000638959 NKX6-3A6NJ46 265 aa-0.23□□□□□ -2.45
LMBR1-222ENST00000638959 FAM166BA8MTA8 275 aa-0.23□□□□□ -2.45
LMBR1-222ENST00000638959 CCL24O00175 119 aa-0.23□□□□□ -2.45
LMBR1-222ENST00000638959 DNTTP04053 509 aa-0.23□□□□□ -2.45
LMBR1-222ENST00000638959 MRPL3P09001 348 aaKnown RBP-0.23□□□□□ -2.45
LMBR1-222ENST00000638959 PRLRP16471 622 aa-0.23□□□□□ -2.45
LMBR1-222ENST00000638959 COL8A2P25067 703 aa-0.23□□□□□ -2.45
LMBR1-222ENST00000638959 PBX3P40426 434 aa-0.23□□□□□ -2.45
LMBR1-222ENST00000638959 DAZ2Q13117 558 aaKnown RBP-0.23□□□□□ -2.45
LMBR1-222ENST00000638959 SNTB1Q13884 538 aaKnown RBP-0.23□□□□□ -2.45
LMBR1-222ENST00000638959 SLC10A1Q14973 349 aa-0.23□□□□□ -2.45
LMBR1-222ENST00000638959 Q71RC1 249 aaPredicted RBP-0.23□□□□□ -2.45
LMBR1-222ENST00000638959 TMPRSS11BQ86T26 416 aa-0.23□□□□□ -2.45
LMBR1-222ENST00000638959 DND1Q8IYX4 353 aaKnown RBP-0.23□□□□□ -2.45
LMBR1-222ENST00000638959 GBP7Q8N8V2 638 aaPredicted RBP-0.23□□□□□ -2.45
LMBR1-222ENST00000638959 LRTM2Q8N967 370 aa-0.23□□□□□ -2.45
LMBR1-222ENST00000638959 OR4C15Q8NGM1 316 aa-0.23□□□□□ -2.45
LMBR1-222ENST00000638959 ZNF671Q8TAW3 534 aa-0.23□□□□□ -2.45
LMBR1-222ENST00000638959 IL12RB2Q99665 862 aa-0.23□□□□□ -2.45
LMBR1-222ENST00000638959 NRTNQ99748 197 aa-0.23□□□□□ -2.45
LMBR1-222ENST00000638959 ELAC2Q9BQ52 826 aaKnown RBP-0.23□□□□□ -2.45
LMBR1-222ENST00000638959 OSBPL11Q9BXB4 747 aa-0.23□□□□□ -2.45
LMBR1-222ENST00000638959 NMNAT2Q9BZQ4 307 aa-0.23□□□□□ -2.45
LMBR1-222ENST00000638959 DAZ3Q9NR90 486 aaKnown RBP-0.23□□□□□ -2.45
LMBR1-222ENST00000638959 SPG21Q9NZD8 308 aa-0.23□□□□□ -2.45
LMBR1-222ENST00000638959 RCOR3Q9P2K3 495 aaPredicted RBP-0.23□□□□□ -2.45
LMBR1-222ENST00000638959 CHTOPQ9Y3Y2 248 aaKnown RBP-0.23□□□□□ -2.45
LMBR1-222ENST00000638959 HBS1LQ9Y450 684 aaKnown RBP-0.23□□□□□ -2.45
LMBR1-222ENST00000638959 DGKBQ9Y6T7 804 aa-0.23□□□□□ -2.45
LMBR1-222ENST00000638959 ANKUB1A6NFN9 424 aa-0.24□□□□□ -2.45
LMBR1-222ENST00000638959 TCP10L2B9ZVM9 353 aa-0.24□□□□□ -2.45
LMBR1-222ENST00000638959 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP-0.24□□□□□ -2.45
LMBR1-222ENST00000638959 ABCD4O14678 606 aa-0.24□□□□□ -2.45
LMBR1-222ENST00000638959 FRAT2O75474 233 aaPredicted RBP-0.24□□□□□ -2.45
LMBR1-222ENST00000638959 EEF2P13639 858 aaKnown RBP-0.24□□□□□ -2.45
LMBR1-222ENST00000638959 P4HA1P13674 534 aa-0.24□□□□□ -2.45
LMBR1-222ENST00000638959 CD27P26842 260 aa-0.24□□□□□ -2.45
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms