RNA–Protein interactions for RNA: ENST00000638076.1

CLN6-224, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 1 (best)

Gene CLN6, Length 2,323 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-224ENST00000638076 IL1RL1Q01638 556 aa20.59■□□□□ 0.89
CLN6-224ENST00000638076 ITPRIPL2Q3MIP1 535 aa20.59■□□□□ 0.89
CLN6-224ENST00000638076 TMEM259Q4ZIN3 620 aa20.59■□□□□ 0.89
CLN6-224ENST00000638076 BROXQ5VW32 411 aa20.59■□□□□ 0.89
CLN6-224ENST00000638076 PIWIL3Q7Z3Z3 882 aaKnown RBP20.59■□□□□ 0.89
CLN6-224ENST00000638076 PHF6Q8IWS0 365 aaKnown RBP eCLIP20.59■□□□□ 0.89
CLN6-224ENST00000638076 ANKRD53Q8N9V6 530 aa20.59■□□□□ 0.89
CLN6-224ENST00000638076 PIK3C3Q8NEB9 887 aa20.59■□□□□ 0.89
CLN6-224ENST00000638076 OR52N2Q8NGI0 321 aa20.59■□□□□ 0.89
CLN6-224ENST00000638076 MTERF3Q96E29 417 aa20.59■□□□□ 0.89
CLN6-224ENST00000638076 AIF1LQ9BQI0 150 aa20.59■□□□□ 0.89
CLN6-224ENST00000638076 RPP25Q9BUL9 199 aaKnown RBP20.59■□□□□ 0.89
CLN6-224ENST00000638076 NKX2-4Q9H2Z4 354 aa20.59■□□□□ 0.89
CLN6-224ENST00000638076 PELI2Q9HAT8 420 aa20.59■□□□□ 0.89
CLN6-224ENST00000638076 PDP1Q9P0J1 537 aaPredicted RBP20.59■□□□□ 0.89
CLN6-224ENST00000638076 DOCK8Q8NF50 2099 aa20.58■□□□□ 0.89
CLN6-224ENST00000638076 PRR23AA6NEV1 266 aa20.58■□□□□ 0.89
CLN6-224ENST00000638076 PLPP1O14494 284 aa20.58■□□□□ 0.89
CLN6-224ENST00000638076 BCKDKO14874 412 aa20.58■□□□□ 0.89
CLN6-224ENST00000638076 TIE1P35590 1138 aa20.58■□□□□ 0.89
CLN6-224ENST00000638076 TRIM23P36406 574 aa20.58■□□□□ 0.89
CLN6-224ENST00000638076 AGERQ15109 404 aa20.58■□□□□ 0.89
CLN6-224ENST00000638076 OR5AK3PQ8NH89 298 aa20.58■□□□□ 0.89
CLN6-224ENST00000638076 SGCDQ92629 289 aa20.58■□□□□ 0.89
CLN6-224ENST00000638076 C12orf43Q96C57 262 aaKnown RBP20.58■□□□□ 0.89
CLN6-224ENST00000638076 SH3GL3Q99963 347 aa20.58■□□□□ 0.89
CLN6-224ENST00000638076 SLC6A16Q9GZN6 736 aa20.58■□□□□ 0.89
CLN6-224ENST00000638076 OSGEPL1Q9H4B0 414 aa20.58■□□□□ 0.89
CLN6-224ENST00000638076 EXD2Q9NVH0 621 aa20.58■□□□□ 0.89
CLN6-224ENST00000638076 TAS2R9Q9NYW1 312 aa20.58■□□□□ 0.89
CLN6-224ENST00000638076 AHSPQ9NZD4 102 aa20.58■□□□□ 0.89
CLN6-224ENST00000638076 WDR37Q9Y2I8 494 aa20.58■□□□□ 0.89
CLN6-224ENST00000638076 RFXAPO00287 272 aa20.58■□□□□ 0.88
CLN6-224ENST00000638076 CPNE6O95741 557 aa20.58■□□□□ 0.88
CLN6-224ENST00000638076 FUCA1P04066 466 aa20.58■□□□□ 0.88
CLN6-224ENST00000638076 ITGAMP11215 1152 aa20.58■□□□□ 0.88
CLN6-224ENST00000638076 ACP5P13686 325 aa20.58■□□□□ 0.88
CLN6-224ENST00000638076 AGXTP21549 392 aa20.58■□□□□ 0.88
CLN6-224ENST00000638076 ITGA1P56199 1179 aa20.58■□□□□ 0.88
CLN6-224ENST00000638076 PPP2R2DQ66LE6 453 aa20.58■□□□□ 0.88
CLN6-224ENST00000638076 KDM4DQ6B0I6 523 aa20.58■□□□□ 0.88
CLN6-224ENST00000638076 IKBIPQ70UQ0 350 aa20.58■□□□□ 0.88
CLN6-224ENST00000638076 SMPDL3AQ92484 453 aa20.58■□□□□ 0.88
CLN6-224ENST00000638076 C7orf34Q96L11 122 aa20.58■□□□□ 0.88
CLN6-224ENST00000638076 DOHHQ9BU89 302 aa20.58■□□□□ 0.88
CLN6-224ENST00000638076 RHBGQ9H310 441 aa20.58■□□□□ 0.88
CLN6-224ENST00000638076 RIBC2Q9H4K1 309 aa20.58■□□□□ 0.88
CLN6-224ENST00000638076 REEP1Q9H902 201 aa20.58■□□□□ 0.88
CLN6-224ENST00000638076 MIEF1Q9NQG6 463 aa20.58■□□□□ 0.88
CLN6-224ENST00000638076 NUMA1Q14980 2115 aa20.57■□□□□ 0.88
CLN6-224ENST00000638076 A0A1W2PRB8 838 aa20.57■□□□□ 0.88
CLN6-224ENST00000638076 FEZF1A0PJY2 475 aa20.57■□□□□ 0.88
CLN6-224ENST00000638076 TMEM229AB2RXF0 380 aa20.57■□□□□ 0.88
CLN6-224ENST00000638076 H7BY64 318 aa20.57■□□□□ 0.88
CLN6-224ENST00000638076 ZNF701M0R085 212 aaPredicted RBP20.57■□□□□ 0.88
CLN6-224ENST00000638076 RTCAO00442 366 aaKnown RBP20.57■□□□□ 0.88
CLN6-224ENST00000638076 LATO43561 262 aa20.57■□□□□ 0.88
CLN6-224ENST00000638076 TNFRSF21O75509 655 aa20.57■□□□□ 0.88
CLN6-224ENST00000638076 IQCCQ4KMZ1 466 aa20.57■□□□□ 0.88
CLN6-224ENST00000638076 GPR107Q5VW38 600 aa20.57■□□□□ 0.88
CLN6-224ENST00000638076 KHDRBS2Q5VWX1 349 aaKnown RBP20.57■□□□□ 0.88
CLN6-224ENST00000638076 LAIR2Q6ISS4 152 aa20.57■□□□□ 0.88
CLN6-224ENST00000638076 TP53I13Q8NBR0 393 aaPredicted RBP20.57■□□□□ 0.88
CLN6-224ENST00000638076 PRAP1Q96NZ9 151 aa20.57■□□□□ 0.88
CLN6-224ENST00000638076 TMEM121BQ9BXQ6 578 aaPredicted RBP20.57■□□□□ 0.88
CLN6-224ENST00000638076 WASH6PQ9NQA3 447 aa20.57■□□□□ 0.88
CLN6-224ENST00000638076 AP1M2Q9Y6Q5 423 aa20.57■□□□□ 0.88
CLN6-224ENST00000638076 DOCK9Q9BZ29 2069 aa20.56■□□□□ 0.88
CLN6-224ENST00000638076 A0A1W2PPV9 198 aa20.56■□□□□ 0.88
CLN6-224ENST00000638076 GPR89AB7ZAQ6 455 aa20.56■□□□□ 0.88
CLN6-224ENST00000638076 ABCB7O75027 752 aa20.56■□□□□ 0.88
CLN6-224ENST00000638076 GPR89BP0CG08 455 aa20.56■□□□□ 0.88
CLN6-224ENST00000638076 CXCR2P25025 360 aa20.56■□□□□ 0.88
CLN6-224ENST00000638076 CHI3L1P36222 383 aaPredicted RBP20.56■□□□□ 0.88
CLN6-224ENST00000638076 CCR8P51685 355 aa20.56■□□□□ 0.88
CLN6-224ENST00000638076 IL18R1Q13478 541 aa20.56■□□□□ 0.88
CLN6-224ENST00000638076 RAPSNQ13702 412 aa20.56■□□□□ 0.88
CLN6-224ENST00000638076 SKIV2LQ15477 1246 aaKnown RBP20.56■□□□□ 0.88
CLN6-224ENST00000638076 GCNT6Q5T4J0 391 aa20.56■□□□□ 0.88
CLN6-224ENST00000638076 DEPDC1Q5TB30 811 aa20.56■□□□□ 0.88
CLN6-224ENST00000638076 FAM180BQ6P0A1 224 aa20.56■□□□□ 0.88
CLN6-224ENST00000638076 ELSPBP1Q96BH3 223 aa20.56■□□□□ 0.88
CLN6-224ENST00000638076 NRBF2Q96F24 287 aa20.56■□□□□ 0.88
CLN6-224ENST00000638076 F2RL3Q96RI0 385 aa20.56■□□□□ 0.88
CLN6-224ENST00000638076 ZNF717Q9BY31 904 aaPredicted RBP20.56■□□□□ 0.88
CLN6-224ENST00000638076 PCBD2Q9H0N5 130 aa20.56■□□□□ 0.88
CLN6-224ENST00000638076 FANCEQ9HB96 536 aa20.56■□□□□ 0.88
CLN6-224ENST00000638076 SPATA7Q9P0W8 599 aa20.56■□□□□ 0.88
CLN6-224ENST00000638076 TAAR2Q9P1P5 351 aa20.56■□□□□ 0.88
CLN6-224ENST00000638076 ACSL5Q9ULC5 683 aa20.56■□□□□ 0.88
CLN6-224ENST00000638076 MAP4K5Q9Y4K4 846 aa20.56■□□□□ 0.88
CLN6-224ENST00000638076 UGT2B11O75310 529 aa20.56■□□□□ 0.88
CLN6-224ENST00000638076 OPN1SWP03999 348 aa20.56■□□□□ 0.88
CLN6-224ENST00000638076 CYP4B1P13584 511 aa20.56■□□□□ 0.88
CLN6-224ENST00000638076 RYKP34925 604 aa20.56■□□□□ 0.88
CLN6-224ENST00000638076 GALK1P51570 392 aa20.56■□□□□ 0.88
CLN6-224ENST00000638076 SELENOWP63302 87 aa20.56■□□□□ 0.88
CLN6-224ENST00000638076 SIM2Q14190 667 aaPredicted RBP20.56■□□□□ 0.88
CLN6-224ENST00000638076 SLC5A12Q1EHB4 618 aa20.56■□□□□ 0.88
CLN6-224ENST00000638076 ANKRD54Q6NXT1 300 aa20.56■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms