RNA–Protein interactions for RNA: ENST00000637494.1

CLN6-221, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5 BASIC

Gene CLN6, Length 765 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-221ENST00000637494 HIST2H2ACQ16777 129 aaPredicted RBP17.83■□□□□ 0.44
CLN6-221ENST00000637494 KBTBD12Q3ZCT8 623 aa17.83■□□□□ 0.44
CLN6-221ENST00000637494 C4orf17Q53FE4 359 aa17.83■□□□□ 0.44
CLN6-221ENST00000637494 HIST2H2AA3Q6FI13 130 aa17.83■□□□□ 0.44
CLN6-221ENST00000637494 C8orf74Q6P047 294 aa17.83■□□□□ 0.44
CLN6-221ENST00000637494 SLCO4C1Q6ZQN7 724 aa17.83■□□□□ 0.44
CLN6-221ENST00000637494 QSOX2Q6ZRP7 698 aa17.83■□□□□ 0.44
CLN6-221ENST00000637494 TBC1D1Q86TI0 1168 aaPredicted RBP17.83■□□□□ 0.44
CLN6-221ENST00000637494 C17orf53Q8N3J3 647 aaPredicted RBP17.83■□□□□ 0.44
CLN6-221ENST00000637494 HORMAD2Q8N7B1 307 aa17.83■□□□□ 0.44
CLN6-221ENST00000637494 SNX31Q8N9S9 440 aa17.83■□□□□ 0.44
CLN6-221ENST00000637494 DNAJB8Q8NHS0 232 aa17.83■□□□□ 0.44
CLN6-221ENST00000637494 TSLPQ969D9 159 aa17.83■□□□□ 0.44
CLN6-221ENST00000637494 GAL3ST3Q96A11 431 aa17.83■□□□□ 0.44
CLN6-221ENST00000637494 UTP23Q9BRU9 249 aaKnown RBP17.83■□□□□ 0.44
CLN6-221ENST00000637494 NT5DC2Q9H857 520 aa17.83■□□□□ 0.44
CLN6-221ENST00000637494 ERRFI1Q9UJM3 462 aaPredicted RBP17.83■□□□□ 0.44
CLN6-221ENST00000637494 OSGIN2Q9Y236 505 aa17.83■□□□□ 0.44
CLN6-221ENST00000637494 SPENQ96T58 3664 aaKnown RBP17.82■□□□□ 0.44
CLN6-221ENST00000637494 RELNP78509 3460 aa17.82■□□□□ 0.44
CLN6-221ENST00000637494 STK16O75716 305 aa17.82■□□□□ 0.44
CLN6-221ENST00000637494 B3GALT4O96024 378 aa17.82■□□□□ 0.44
CLN6-221ENST00000637494 CRABP2P29373 138 aa17.82■□□□□ 0.44
CLN6-221ENST00000637494 GGT5P36269 586 aa17.82■□□□□ 0.44
CLN6-221ENST00000637494 SLC26A5P58743 744 aa17.82■□□□□ 0.44
CLN6-221ENST00000637494 GPX6P59796 221 aa17.82■□□□□ 0.44
CLN6-221ENST00000637494 BTN3A2P78410 334 aa17.82■□□□□ 0.44
CLN6-221ENST00000637494 PDK4Q16654 411 aa17.82■□□□□ 0.44
CLN6-221ENST00000637494 C18orf21Q32NC0 220 aaPredicted RBP17.82■□□□□ 0.44
CLN6-221ENST00000637494 PAGE2BQ5JRK9 111 aa17.82■□□□□ 0.44
CLN6-221ENST00000637494 H3F3CQ6NXT2 135 aa17.82■□□□□ 0.44
CLN6-221ENST00000637494 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP17.82■□□□□ 0.44
CLN6-221ENST00000637494 STAG3L4Q8TBR4 150 aa17.82■□□□□ 0.44
CLN6-221ENST00000637494 CREB3L4Q8TEY5 395 aa17.82■□□□□ 0.44
CLN6-221ENST00000637494 EHD1Q9H4M9 534 aa17.82■□□□□ 0.44
CLN6-221ENST00000637494 NMRAL1Q9HBL8 299 aa17.82■□□□□ 0.44
CLN6-221ENST00000637494 PRDM9Q9NQV7 894 aa17.82■□□□□ 0.44
CLN6-221ENST00000637494 E2F3O00716 465 aa17.81■□□□□ 0.44
CLN6-221ENST00000637494 CCNT2O60583 730 aaKnown RBP17.81■□□□□ 0.44
CLN6-221ENST00000637494 WISP3O95389 354 aaPredicted RBP17.81■□□□□ 0.44
CLN6-221ENST00000637494 HSPA7P48741 367 aa17.81■□□□□ 0.44
CLN6-221ENST00000637494 TGM3Q08188 693 aa17.81■□□□□ 0.44
CLN6-221ENST00000637494 LAPTM5Q13571 262 aa17.81■□□□□ 0.44
CLN6-221ENST00000637494 ZKSCAN8Q15776 578 aaPredicted RBP17.81■□□□□ 0.44
CLN6-221ENST00000637494 XKR6Q5GH73 641 aa17.81■□□□□ 0.44
CLN6-221ENST00000637494 ZNF766Q5HY98 468 aa17.81■□□□□ 0.44
CLN6-221ENST00000637494 FCRLBQ6BAA4 426 aa17.81■□□□□ 0.44
CLN6-221ENST00000637494 TRIM40Q6P9F5 258 aa17.81■□□□□ 0.44
CLN6-221ENST00000637494 CEP128Q6ZU80 1094 aa17.81■□□□□ 0.44
CLN6-221ENST00000637494 ZNF572Q7Z3I7 529 aaPredicted RBP17.81■□□□□ 0.44
CLN6-221ENST00000637494 CRLF3Q8IUI8 442 aa17.81■□□□□ 0.44
CLN6-221ENST00000637494 SHISA5Q8N114 240 aa17.81■□□□□ 0.44
CLN6-221ENST00000637494 BEST3Q8N1M1 668 aa17.81■□□□□ 0.44
CLN6-221ENST00000637494 ADAMTS18Q8TE60 1221 aa17.81■□□□□ 0.44
CLN6-221ENST00000637494 FBF1Q8TES7 1133 aa17.81■□□□□ 0.44
CLN6-221ENST00000637494 NR4A3Q92570 626 aa17.81■□□□□ 0.44
CLN6-221ENST00000637494 EXT2Q93063 718 aa17.81■□□□□ 0.44
CLN6-221ENST00000637494 KIAA1191Q96A73 305 aa17.81■□□□□ 0.44
CLN6-221ENST00000637494 PTCD3Q96EY7 689 aaKnown RBP17.81■□□□□ 0.44
CLN6-221ENST00000637494 SLX1AQ9BQ83 275 aa17.81■□□□□ 0.44
CLN6-221ENST00000637494 TMEM79Q9BSE2 394 aa17.81■□□□□ 0.44
CLN6-221ENST00000637494 EFCAB11Q9BUY7 163 aa17.81■□□□□ 0.44
CLN6-221ENST00000637494 NPLQ9BXD5 320 aaPredicted RBP17.81■□□□□ 0.44
CLN6-221ENST00000637494 KLHL31Q9H511 634 aa17.81■□□□□ 0.44
CLN6-221ENST00000637494 COPS7BQ9H9Q2 264 aaPredicted RBP17.81■□□□□ 0.44
CLN6-221ENST00000637494 MRPS33Q9Y291 106 aaKnown RBP17.81■□□□□ 0.44
CLN6-221ENST00000637494 PTPN13Q12923 2485 aa17.81■□□□□ 0.44
CLN6-221ENST00000637494 A1L4Q6 167 aa17.8■□□□□ 0.44
CLN6-221ENST00000637494 CYSRT1A8MQ03 144 aa17.8■□□□□ 0.44
CLN6-221ENST00000637494 CLDN4O14493 209 aa17.8■□□□□ 0.44
CLN6-221ENST00000637494 CDK2AP1O14519 115 aa17.8■□□□□ 0.44
CLN6-221ENST00000637494 ERI3O43414 337 aaKnown RBP17.8■□□□□ 0.44
CLN6-221ENST00000637494 B3GALT2O43825 422 aa17.8■□□□□ 0.44
CLN6-221ENST00000637494 CLEC3AO75596 197 aa17.8■□□□□ 0.44
CLN6-221ENST00000637494 MLYCDO95822 493 aa17.8■□□□□ 0.44
CLN6-221ENST00000637494 LDLRP01130 860 aa17.8■□□□□ 0.44
CLN6-221ENST00000637494 SMIM10L1P0DMW3 83 aa17.8■□□□□ 0.44
CLN6-221ENST00000637494 OC90Q02509 493 aaPredicted RBP17.8■□□□□ 0.44
CLN6-221ENST00000637494 HYAL2Q12891 473 aa17.8■□□□□ 0.44
CLN6-221ENST00000637494 RCN2Q14257 317 aa17.8■□□□□ 0.44
CLN6-221ENST00000637494 OR4D1Q15615 310 aa17.8■□□□□ 0.44
CLN6-221ENST00000637494 LGI4Q8N135 537 aa17.8■□□□□ 0.44
CLN6-221ENST00000637494 CA13Q8N1Q1 262 aa17.8■□□□□ 0.44
CLN6-221ENST00000637494 PDPRQ8NCN5 879 aa17.8■□□□□ 0.44
CLN6-221ENST00000637494 SMIM10Q96HG1 83 aa17.8■□□□□ 0.44
CLN6-221ENST00000637494 UBXN10Q96LJ8 280 aa17.8■□□□□ 0.44
CLN6-221ENST00000637494 NUDT4Q9NZJ9 180 aa17.8■□□□□ 0.44
CLN6-221ENST00000637494 MMACHCQ9Y4U1 282 aa17.8■□□□□ 0.44
CLN6-221ENST00000637494 PCDHGB6Q9Y5F9 930 aa17.8■□□□□ 0.44
CLN6-221ENST00000637494 CPAMD8Q8IZJ3 1885 aa17.8■□□□□ 0.44
CLN6-221ENST00000637494 RP1L1Q8IWN7 2480 aaPredicted RBP17.79■□□□□ 0.44
CLN6-221ENST00000637494 A0A1B0GUH1 482 aa17.79■□□□□ 0.44
CLN6-221ENST00000637494 SYNDIG1LA6NDD5 238 aa17.79■□□□□ 0.44
CLN6-221ENST00000637494 SUPT3HB4E1H0 165 aa17.79■□□□□ 0.44
CLN6-221ENST00000637494 TAPBPO15533 448 aa17.79■□□□□ 0.44
CLN6-221ENST00000637494 LRRTM2O43300 516 aa17.79■□□□□ 0.44
CLN6-221ENST00000637494 DNAJB6O75190 326 aa17.79■□□□□ 0.44
CLN6-221ENST00000637494 SUPT3HO75486 399 aa17.79■□□□□ 0.44
CLN6-221ENST00000637494 LTA4HP09960 611 aaKnown RBP17.79■□□□□ 0.44
CLN6-221ENST00000637494 CD46P15529 392 aa17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms