RNA–Protein interactions for RNA: ENST00000636934.1

CLN8-211, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 5 BASIC

Gene CLN8, Length 1,790 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-211ENST00000636934 ISL1P61371 349 aa17.73■□□□□ 0.43
CLN8-211ENST00000636934 REEP5Q00765 189 aa17.73■□□□□ 0.43
CLN8-211ENST00000636934 NEDD8Q15843 81 aa17.73■□□□□ 0.43
CLN8-211ENST00000636934 ZNF630Q2M218 657 aaPredicted RBP17.73■□□□□ 0.43
CLN8-211ENST00000636934 C9orf50Q5SZB4 431 aa17.73■□□□□ 0.43
CLN8-211ENST00000636934 DEPDC1Q5TB30 811 aa17.73■□□□□ 0.43
CLN8-211ENST00000636934 KHDRBS2Q5VWX1 349 aaKnown RBP17.73■□□□□ 0.43
CLN8-211ENST00000636934 VN1R5Q7Z5H4 357 aa17.73■□□□□ 0.43
CLN8-211ENST00000636934 LMNTD1Q8N9Z9 388 aa17.73■□□□□ 0.43
CLN8-211ENST00000636934 ZNF740Q8NDX6 193 aa17.73■□□□□ 0.43
CLN8-211ENST00000636934 ZNF566Q969W8 418 aa17.73■□□□□ 0.43
CLN8-211ENST00000636934 ZNF347Q96SE7 839 aa17.73■□□□□ 0.43
CLN8-211ENST00000636934 DOK1Q99704 481 aa17.73■□□□□ 0.43
CLN8-211ENST00000636934 APOL4Q9BPW4 351 aa17.73■□□□□ 0.43
CLN8-211ENST00000636934 TIMM29Q9BSF4 260 aa17.73■□□□□ 0.43
CLN8-211ENST00000636934 RAB11FIP5Q9BXF6 653 aa17.73■□□□□ 0.43
CLN8-211ENST00000636934 ZDHHC4Q9NPG8 344 aa17.73■□□□□ 0.43
CLN8-211ENST00000636934 PDP1Q9P0J1 537 aaPredicted RBP17.73■□□□□ 0.43
CLN8-211ENST00000636934 ICKQ9UPZ9 632 aa17.73■□□□□ 0.43
CLN8-211ENST00000636934 PCDHGB3Q9Y5G1 929 aa17.73■□□□□ 0.43
CLN8-211ENST00000636934 ATG2AQ2TAZ0 1938 aa17.72■□□□□ 0.43
CLN8-211ENST00000636934 GBAP04062 536 aa17.72■□□□□ 0.43
CLN8-211ENST00000636934 IL7RP16871 459 aa17.72■□□□□ 0.43
CLN8-211ENST00000636934 GDI1P31150 447 aa17.72■□□□□ 0.43
CLN8-211ENST00000636934 TRIM23P36406 574 aa17.72■□□□□ 0.43
CLN8-211ENST00000636934 RPS21P63220 83 aaKnown RBP17.72■□□□□ 0.43
CLN8-211ENST00000636934 SELENOWP63302 87 aa17.72■□□□□ 0.43
CLN8-211ENST00000636934 KCNJ10P78508 379 aa17.72■□□□□ 0.43
CLN8-211ENST00000636934 MC1RQ01726 317 aa17.72■□□□□ 0.43
CLN8-211ENST00000636934 SGCGQ13326 291 aa17.72■□□□□ 0.43
CLN8-211ENST00000636934 C16orf72Q14CZ0 275 aa17.72■□□□□ 0.43
CLN8-211ENST00000636934 MEP1AQ16819 746 aa17.72■□□□□ 0.43
CLN8-211ENST00000636934 TMEM184AQ6ZMB5 413 aa17.72■□□□□ 0.43
CLN8-211ENST00000636934 CCDC80Q76M96 950 aa17.72■□□□□ 0.43
CLN8-211ENST00000636934 CEP68Q76N32 757 aa17.72■□□□□ 0.43
CLN8-211ENST00000636934 ZC3H7AQ8IWR0 971 aaKnown RBP17.72■□□□□ 0.43
CLN8-211ENST00000636934 ZNF513Q8N8E2 541 aaPredicted RBP17.72■□□□□ 0.43
CLN8-211ENST00000636934 FBLIM1Q8WUP2 373 aa17.72■□□□□ 0.43
CLN8-211ENST00000636934 C12orf43Q96C57 262 aaKnown RBP17.72■□□□□ 0.43
CLN8-211ENST00000636934 C7orf34Q96L11 122 aa17.72■□□□□ 0.43
CLN8-211ENST00000636934 ACAT2Q9BWD1 397 aa17.72■□□□□ 0.43
CLN8-211ENST00000636934 LGR4Q9BXB1 951 aa17.72■□□□□ 0.43
CLN8-211ENST00000636934 C1QTNF7Q9BXJ2 289 aa17.72■□□□□ 0.43
CLN8-211ENST00000636934 MS4A8Q9BY19 250 aa17.72■□□□□ 0.43
CLN8-211ENST00000636934 PLA2G2FQ9BZM2 168 aa17.72■□□□□ 0.43
CLN8-211ENST00000636934 RIBC2Q9H4K1 309 aa17.72■□□□□ 0.43
CLN8-211ENST00000636934 RUBCNLQ9H714 662 aa17.72■□□□□ 0.43
CLN8-211ENST00000636934 RAPGEFL1Q9UHV5 662 aa17.72■□□□□ 0.43
CLN8-211ENST00000636934 CAPN5O15484 640 aaPredicted RBP17.71■□□□□ 0.43
CLN8-211ENST00000636934 ITGA2P17301 1181 aa17.71■□□□□ 0.43
CLN8-211ENST00000636934 UQCRC2P22695 453 aa17.71■□□□□ 0.43
CLN8-211ENST00000636934 WASP42768 502 aa17.71■□□□□ 0.43
CLN8-211ENST00000636934 DAPP51397 102 aa17.71■□□□□ 0.43
CLN8-211ENST00000636934 CLCNKAP51800 687 aa17.71■□□□□ 0.43
CLN8-211ENST00000636934 MVDP53602 400 aa17.71■□□□□ 0.43
CLN8-211ENST00000636934 IL5RAQ01344 420 aa17.71■□□□□ 0.43
CLN8-211ENST00000636934 CTBSQ01459 385 aa17.71■□□□□ 0.43
CLN8-211ENST00000636934 SCARB2Q14108 478 aa17.71■□□□□ 0.43
CLN8-211ENST00000636934 IRF4Q15306 451 aa17.71■□□□□ 0.43
CLN8-211ENST00000636934 IFI44LQ53G44 452 aa17.71■□□□□ 0.43
CLN8-211ENST00000636934 KIAA1161Q6NSJ0 714 aa17.71■□□□□ 0.43
CLN8-211ENST00000636934 GALNT10Q86SR1 603 aa17.71■□□□□ 0.43
CLN8-211ENST00000636934 CYP4Z1Q86W10 505 aa17.71■□□□□ 0.43
CLN8-211ENST00000636934 C2orf73Q8N5S3 287 aaPredicted RBP17.71■□□□□ 0.43
CLN8-211ENST00000636934 OR13F1Q8NGS4 319 aa17.71■□□□□ 0.43
CLN8-211ENST00000636934 CIDECQ96AQ7 238 aaPredicted RBP17.71■□□□□ 0.43
CLN8-211ENST00000636934 CHFRQ96EP1 664 aa17.71■□□□□ 0.43
CLN8-211ENST00000636934 NLNQ9BYT8 704 aa17.71■□□□□ 0.43
CLN8-211ENST00000636934 FANCEQ9HB96 536 aa17.71■□□□□ 0.43
CLN8-211ENST00000636934 KRT84Q9NSB2 600 aa17.71■□□□□ 0.43
CLN8-211ENST00000636934 THUMPD1Q9NXG2 353 aaKnown RBP17.71■□□□□ 0.43
CLN8-211ENST00000636934 ADAMDEC1O15204 470 aa17.71■□□□□ 0.43
CLN8-211ENST00000636934 KLHL18O94889 574 aa17.71■□□□□ 0.43
CLN8-211ENST00000636934 ETFAP13804 333 aa17.71■□□□□ 0.43
CLN8-211ENST00000636934 DDCP20711 480 aa17.71■□□□□ 0.43
CLN8-211ENST00000636934 TPP2P29144 1249 aaPredicted RBP17.71■□□□□ 0.43
CLN8-211ENST00000636934 MAPK12P53778 367 aa17.71■□□□□ 0.43
CLN8-211ENST00000636934 TMBIM6P55061 237 aa17.71■□□□□ 0.43
CLN8-211ENST00000636934 HEPACAMQ14CZ8 416 aa17.71■□□□□ 0.43
CLN8-211ENST00000636934 CTU2Q2VPK5 515 aaKnown RBP17.71■□□□□ 0.43
CLN8-211ENST00000636934 GPR107Q5VW38 600 aa17.71■□□□□ 0.43
CLN8-211ENST00000636934 ANKRD34AQ69YU3 496 aa17.71■□□□□ 0.43
CLN8-211ENST00000636934 ANKRD54Q6NXT1 300 aa17.71■□□□□ 0.43
CLN8-211ENST00000636934 ATG16L2Q8NAA4 619 aa17.71■□□□□ 0.43
CLN8-211ENST00000636934 MAL2Q969L2 176 aa17.71■□□□□ 0.43
CLN8-211ENST00000636934 ERLEC1Q96DZ1 483 aa17.71■□□□□ 0.43
CLN8-211ENST00000636934 FERD3LQ96RJ6 166 aa17.71■□□□□ 0.43
CLN8-211ENST00000636934 KXD1Q9BQD3 176 aa17.71■□□□□ 0.43
CLN8-211ENST00000636934 FBRSQ9HAH7 460 aa17.71■□□□□ 0.43
CLN8-211ENST00000636934 MBNL1Q9NR56 388 aaKnown RBP17.71■□□□□ 0.43
CLN8-211ENST00000636934 ADAM29Q9UKF5 820 aa17.71■□□□□ 0.43
CLN8-211ENST00000636934 ANGPT4Q9Y264 503 aa17.71■□□□□ 0.43
CLN8-211ENST00000636934 GMPPBQ9Y5P6 360 aa17.71■□□□□ 0.43
CLN8-211ENST00000636934 A0A1W2PP55 124 aa17.7■□□□□ 0.42
CLN8-211ENST00000636934 SLC1A7O00341 560 aa17.7■□□□□ 0.42
CLN8-211ENST00000636934 SEC14L2O76054 403 aa17.7■□□□□ 0.42
CLN8-211ENST00000636934 SOAT1P35610 550 aa17.7■□□□□ 0.42
CLN8-211ENST00000636934 CXCR4P61073 352 aa17.7■□□□□ 0.42
CLN8-211ENST00000636934 CDK6Q00534 326 aa17.7■□□□□ 0.42
CLN8-211ENST00000636934 ATAT1Q5SQI0 421 aa17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms