RNA–Protein interactions for RNA: ENST00000636843.1

CTSD-208, Transcript of cathepsin D, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CTSD, Length 1,512 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-208ENST00000636843 UTP4Q969X6 686 aaKnown RBP12.02□□□□□ -0.48
CTSD-208ENST00000636843 ZUFSPQ96AP4 578 aa12.02□□□□□ -0.48
CTSD-208ENST00000636843 ZNF285Q96NJ3 590 aa12.02□□□□□ -0.48
CTSD-208ENST00000636843 AGAP4Q96P64 663 aa12.02□□□□□ -0.48
CTSD-208ENST00000636843 ARMCX1Q9P291 453 aa12.02□□□□□ -0.48
CTSD-208ENST00000636843 NTNG1Q9Y2I2 539 aa12.02□□□□□ -0.48
CTSD-208ENST00000636843 CNTRLQ7Z7A1 2325 aa12.02□□□□□ -0.49
CTSD-208ENST00000636843 FITM1A5D6W6 292 aa12.01□□□□□ -0.49
CTSD-208ENST00000636843 PRMT5O14744 637 aaPredicted RBP12.01□□□□□ -0.49
CTSD-208ENST00000636843 SRPX2O60687 465 aaPredicted RBP12.01□□□□□ -0.49
CTSD-208ENST00000636843 CCDC166P0CW27 439 aa12.01□□□□□ -0.49
CTSD-208ENST00000636843 AOAHP28039 575 aa12.01□□□□□ -0.49
CTSD-208ENST00000636843 TSFMP43897 325 aaKnown RBP12.01□□□□□ -0.49
CTSD-208ENST00000636843 MNAT1P51948 309 aa12.01□□□□□ -0.49
CTSD-208ENST00000636843 NAGLUP54802 743 aa12.01□□□□□ -0.49
CTSD-208ENST00000636843 GRB7Q14451 532 aa12.01□□□□□ -0.49
CTSD-208ENST00000636843 SF1Q15637 639 aaKnown RBP12.01□□□□□ -0.49
CTSD-208ENST00000636843 FAM214AQ32MH5 1076 aa12.01□□□□□ -0.49
CTSD-208ENST00000636843 WASHC2DQ5SRD0 308 aa12.01□□□□□ -0.49
CTSD-208ENST00000636843 ZNF787Q6DD87 383 aa12.01□□□□□ -0.49
CTSD-208ENST00000636843 FCRL6Q6DN72 434 aa12.01□□□□□ -0.49
CTSD-208ENST00000636843 KIRREL2Q6UWL6 708 aa12.01□□□□□ -0.49
CTSD-208ENST00000636843 COX15Q7KZN9 410 aa12.01□□□□□ -0.49
CTSD-208ENST00000636843 MAVSQ7Z434 540 aa12.01□□□□□ -0.49
CTSD-208ENST00000636843 CNDP1Q96KN2 507 aa12.01□□□□□ -0.49
CTSD-208ENST00000636843 IL17FQ96PD4 163 aa12.01□□□□□ -0.49
CTSD-208ENST00000636843 SPSB2Q99619 263 aa12.01□□□□□ -0.49
CTSD-208ENST00000636843 AARSD1Q9BTE6 412 aaKnown RBP12.01□□□□□ -0.49
CTSD-208ENST00000636843 LHPPQ9H008 270 aa12.01□□□□□ -0.49
CTSD-208ENST00000636843 MMADHCQ9H3L0 296 aaPredicted RBP12.01□□□□□ -0.49
CTSD-208ENST00000636843 SEMA3GQ9NS98 782 aa12.01□□□□□ -0.49
CTSD-208ENST00000636843 HS3ST3B1Q9Y662 390 aa12.01□□□□□ -0.49
CTSD-208ENST00000636843 SNRNP200O75643 2136 aaKnown RBP12.01□□□□□ -0.49
CTSD-208ENST00000636843 KPNA5O15131 536 aa12.01□□□□□ -0.49
CTSD-208ENST00000636843 HDAC3O15379 428 aa12.01□□□□□ -0.49
CTSD-208ENST00000636843 GSC2O15499 205 aa12.01□□□□□ -0.49
CTSD-208ENST00000636843 PRICKLE3O43900 615 aaPredicted RBP12.01□□□□□ -0.49
CTSD-208ENST00000636843 DIAPH2O60879 1101 aa12.01□□□□□ -0.49
CTSD-208ENST00000636843 ENO1P06733 434 aaKnown RBP12.01□□□□□ -0.49
CTSD-208ENST00000636843 COL8A1P27658 744 aa12.01□□□□□ -0.49
CTSD-208ENST00000636843 GRIA3P42263 894 aa12.01□□□□□ -0.49
CTSD-208ENST00000636843 TTPAP49638 278 aa12.01□□□□□ -0.49
CTSD-208ENST00000636843 PGGT1BP53609 377 aa12.01□□□□□ -0.49
CTSD-208ENST00000636843 CDKN2DP55273 166 aa12.01□□□□□ -0.49
CTSD-208ENST00000636843 RBBP7Q16576 425 aa12.01□□□□□ -0.49
CTSD-208ENST00000636843 ARL13AQ5H913 290 aaPredicted RBP12.01□□□□□ -0.49
CTSD-208ENST00000636843 B3GNTL1Q67FW5 361 aaPredicted RBP12.01□□□□□ -0.49
CTSD-208ENST00000636843 LDB1Q86U70 411 aaPredicted RBP12.01□□□□□ -0.49
CTSD-208ENST00000636843 TREML1Q86YW5 311 aa12.01□□□□□ -0.49
CTSD-208ENST00000636843 RAB42Q8N4Z0 105 aa12.01□□□□□ -0.49
CTSD-208ENST00000636843 TEX9Q8N6V9 391 aa12.01□□□□□ -0.49
CTSD-208ENST00000636843 LMNTD1Q8N9Z9 388 aa12.01□□□□□ -0.49
CTSD-208ENST00000636843 DNAJB14Q8TBM8 379 aa12.01□□□□□ -0.49
CTSD-208ENST00000636843 LKAAEAR1Q8TD35 194 aa12.01□□□□□ -0.49
CTSD-208ENST00000636843 MCUR1Q96AQ8 359 aa12.01□□□□□ -0.49
CTSD-208ENST00000636843 RAD51AP1Q96B01 352 aa12.01□□□□□ -0.49
CTSD-208ENST00000636843 CADM1Q9BY67 442 aaKnown RBP12.01□□□□□ -0.49
CTSD-208ENST00000636843 C1orf21Q9H246 121 aa12.01□□□□□ -0.49
CTSD-208ENST00000636843 EPS8L2Q9H6S3 715 aa12.01□□□□□ -0.49
CTSD-208ENST00000636843 EML4Q9HC35 981 aaKnown RBP12.01□□□□□ -0.49
CTSD-208ENST00000636843 TAS2R1Q9NYW7 299 aa12.01□□□□□ -0.49
CTSD-208ENST00000636843 CRYL1Q9Y2S2 319 aa12.01□□□□□ -0.49
CTSD-208ENST00000636843 KLK4Q9Y5K2 254 aa12.01□□□□□ -0.49
CTSD-208ENST00000636843 ITPR2Q14571 2701 aa12.01□□□□□ -0.49
CTSD-208ENST00000636843 PCM1Q15154 2024 aa12□□□□□ -0.49
CTSD-208ENST00000636843 CENPEQ02224 2701 aa12□□□□□ -0.49
CTSD-208ENST00000636843 VSTM2BA6NLU5 285 aa12□□□□□ -0.49
CTSD-208ENST00000636843 ENO4A6NNW6 628 aa12□□□□□ -0.49
CTSD-208ENST00000636843 IQCF5A8MTL0 148 aa12□□□□□ -0.49
CTSD-208ENST00000636843 CCND1P24385 295 aa12□□□□□ -0.49
CTSD-208ENST00000636843 PRDX6P30041 224 aa12□□□□□ -0.49
CTSD-208ENST00000636843 PER3P56645 1201 aa12□□□□□ -0.49
CTSD-208ENST00000636843 GALNT1Q10472 559 aaPredicted RBP12□□□□□ -0.49
CTSD-208ENST00000636843 SEMA3AQ14563 771 aa12□□□□□ -0.49
CTSD-208ENST00000636843 ZNF169Q14929 603 aaPredicted RBP12□□□□□ -0.49
CTSD-208ENST00000636843 DNAL1Q4LDG9 190 aa12□□□□□ -0.49
CTSD-208ENST00000636843 PTRHD1Q6GMV3 140 aaKnown RBP12□□□□□ -0.49
CTSD-208ENST00000636843 ZNF549Q6P9A3 640 aa12□□□□□ -0.49
CTSD-208ENST00000636843 RINLQ6ZS11 566 aa12□□□□□ -0.49
CTSD-208ENST00000636843 AFAP1L2Q8N4X5 818 aa12□□□□□ -0.49
CTSD-208ENST00000636843 FAM13CQ8NE31 585 aa12□□□□□ -0.49
CTSD-208ENST00000636843 ZDHHC19Q8WVZ1 309 aaPredicted RBP12□□□□□ -0.49
CTSD-208ENST00000636843 FAR2Q96K12 515 aa12□□□□□ -0.49
CTSD-208ENST00000636843 PANX3Q96QZ0 392 aa12□□□□□ -0.49
CTSD-208ENST00000636843 MIPEPQ99797 713 aa12□□□□□ -0.49
CTSD-208ENST00000636843 CCDC28BQ9BUN5 200 aa12□□□□□ -0.49
CTSD-208ENST00000636843 CCDC68Q9H2F9 335 aa12□□□□□ -0.49
CTSD-208ENST00000636843 CTSFQ9UBX1 484 aa12□□□□□ -0.49
CTSD-208ENST00000636843 CIDEBQ9UHD4 219 aa12□□□□□ -0.49
CTSD-208ENST00000636843 CSAG2Q9Y5P2 127 aa12□□□□□ -0.49
CTSD-208ENST00000636843 COMMD10Q9Y6G5 202 aa12□□□□□ -0.49
CTSD-208ENST00000636843 MDC1Q14676 2089 aaKnown RBP11.99□□□□□ -0.49
CTSD-208ENST00000636843 CCDC189A1A4V9 331 aa11.99□□□□□ -0.49
CTSD-208ENST00000636843 A8MT66 165 aa11.99□□□□□ -0.49
CTSD-208ENST00000636843 B2RBV5 119 aa11.99□□□□□ -0.49
CTSD-208ENST00000636843 NDUFS3O75489 264 aa11.99□□□□□ -0.49
CTSD-208ENST00000636843 CHRNGP07510 517 aa11.99□□□□□ -0.49
CTSD-208ENST00000636843 TFEBP19484 476 aa11.99□□□□□ -0.49
CTSD-208ENST00000636843 OR1D4P47884 311 aa11.99□□□□□ -0.49
CTSD-208ENST00000636843 VSX2P58304 361 aaPredicted RBP11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms