RNA–Protein interactions for RNA: ENST00000636549.1

CACNA1A-227, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 6,792 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-227ENST00000636549 RPL19P84098 196 aaKnown RBP17.26■□□□□ 0.35
CACNA1A-227ENST00000636549 IL10RBQ08334 325 aa17.26■□□□□ 0.35
CACNA1A-227ENST00000636549 AIMP2Q13155 320 aaKnown RBP17.26■□□□□ 0.35
CACNA1A-227ENST00000636549 EEF1A1P5Q5VTE0 462 aa17.26■□□□□ 0.35
CACNA1A-227ENST00000636549 C7orf34Q96L11 122 aa17.26■□□□□ 0.35
CACNA1A-227ENST00000636549 TREX2Q9BQ50 279 aaPredicted RBP17.26■□□□□ 0.35
CACNA1A-227ENST00000636549 TRIM36Q9NQ86 728 aa17.26■□□□□ 0.35
CACNA1A-227ENST00000636549 LCP2Q13094 533 aa17.26■□□□□ 0.35
CACNA1A-227ENST00000636549 SYT16Q17RD7 645 aa17.26■□□□□ 0.35
CACNA1A-227ENST00000636549 TRABD2AQ86V40 505 aa17.26■□□□□ 0.35
CACNA1A-227ENST00000636549 CROCCP3Q8IVE0 287 aa17.26■□□□□ 0.35
CACNA1A-227ENST00000636549 B4GALT4O60513 344 aa17.26■□□□□ 0.35
CACNA1A-227ENST00000636549 PLCXD2Q0VAA5 305 aa17.26■□□□□ 0.35
CACNA1A-227ENST00000636549 FOXN4Q96NZ1 517 aa17.26■□□□□ 0.35
CACNA1A-227ENST00000636549 ERMAPQ96PL5 475 aaPredicted RBP17.26■□□□□ 0.35
CACNA1A-227ENST00000636549 NMUR2Q9GZQ4 415 aa17.26■□□□□ 0.35
CACNA1A-227ENST00000636549 VPS29Q9UBQ0 182 aa17.26■□□□□ 0.35
CACNA1A-227ENST00000636549 ZNF225Q9UK10 706 aa17.26■□□□□ 0.35
CACNA1A-227ENST00000636549 PCDHGB7Q9Y5F8 929 aa17.26■□□□□ 0.35
CACNA1A-227ENST00000636549 A0A0D9SEW6 157 aa17.25■□□□□ 0.35
CACNA1A-227ENST00000636549 FAM171A2A8MVW0 826 aa17.25■□□□□ 0.35
CACNA1A-227ENST00000636549 LOC730098B7Z3J9 87 aa17.25■□□□□ 0.35
CACNA1A-227ENST00000636549 P04436 131 aa17.25■□□□□ 0.35
CACNA1A-227ENST00000636549 ASB15Q8WXK1 588 aa17.25■□□□□ 0.35
CACNA1A-227ENST00000636549 RMI1Q9H9A7 625 aa17.25■□□□□ 0.35
CACNA1A-227ENST00000636549 K7EPI3 171 aa17.25■□□□□ 0.35
CACNA1A-227ENST00000636549 GABRA2P47869 451 aa17.25■□□□□ 0.35
CACNA1A-227ENST00000636549 LCLAT1Q6UWP7 414 aa17.25■□□□□ 0.35
CACNA1A-227ENST00000636549 ARL5BQ96KC2 179 aa17.25■□□□□ 0.35
CACNA1A-227ENST00000636549 NECAB3Q96P71 396 aaPredicted RBP17.25■□□□□ 0.35
CACNA1A-227ENST00000636549 RAB11FIP5Q9BXF6 653 aa17.25■□□□□ 0.35
CACNA1A-227ENST00000636549 ZNF442Q9H7R0 627 aa17.25■□□□□ 0.35
CACNA1A-227ENST00000636549 ADAMDEC1O15204 470 aa17.25■□□□□ 0.35
CACNA1A-227ENST00000636549 ECI2O75521 394 aa17.25■□□□□ 0.35
CACNA1A-227ENST00000636549 CCDC58Q4VC31 144 aa17.25■□□□□ 0.35
CACNA1A-227ENST00000636549 ARCQ7LC44 396 aa17.25■□□□□ 0.35
CACNA1A-227ENST00000636549 ILDR1Q86SU0 546 aaPredicted RBP17.25■□□□□ 0.35
CACNA1A-227ENST00000636549 GNB4Q9HAV0 340 aa17.25■□□□□ 0.35
CACNA1A-227ENST00000636549 SLC2A4RGQ9NR83 387 aa17.25■□□□□ 0.35
CACNA1A-227ENST00000636549 ZDHHC3Q9NYG2 299 aa17.25■□□□□ 0.35
CACNA1A-227ENST00000636549 HMGB3O15347 200 aaKnown RBP17.25■□□□□ 0.35
CACNA1A-227ENST00000636549 GRID2O43424 1007 aa17.25■□□□□ 0.35
CACNA1A-227ENST00000636549 HRGP04196 525 aa17.25■□□□□ 0.35
CACNA1A-227ENST00000636549 CCNHP51946 323 aaPredicted RBP17.25■□□□□ 0.35
CACNA1A-227ENST00000636549 DLX2Q07687 328 aaPredicted RBP17.25■□□□□ 0.35
CACNA1A-227ENST00000636549 OR4K1Q8NGD4 311 aa17.25■□□□□ 0.35
CACNA1A-227ENST00000636549 RNPEPL1Q9HAU8 725 aa17.25■□□□□ 0.35
CACNA1A-227ENST00000636549 SLC7A11Q9UPY5 501 aa17.25■□□□□ 0.35
CACNA1A-227ENST00000636549 PPRC1Q5VV67 1664 aaKnown RBP17.25■□□□□ 0.35
CACNA1A-227ENST00000636549 BBIP1A8MTZ0 92 aa17.25■□□□□ 0.35
CACNA1A-227ENST00000636549 DNM1LO00429 736 aa17.25■□□□□ 0.35
CACNA1A-227ENST00000636549 TLX2O43763 284 aaPredicted RBP17.25■□□□□ 0.35
CACNA1A-227ENST00000636549 OR12D1P0DN82 309 aa17.25■□□□□ 0.35
CACNA1A-227ENST00000636549 ZBTB48P10074 688 aaPredicted RBP17.25■□□□□ 0.35
CACNA1A-227ENST00000636549 SLC2A2P11168 524 aaPredicted RBP17.25■□□□□ 0.35
CACNA1A-227ENST00000636549 SCGB2A2Q13296 93 aa17.25■□□□□ 0.35
CACNA1A-227ENST00000636549 C16orf58Q96GQ5 468 aa17.25■□□□□ 0.35
CACNA1A-227ENST00000636549 S100A14Q9HCY8 104 aa17.25■□□□□ 0.35
CACNA1A-227ENST00000636549 RUVBL1Q9Y265 456 aaKnown RBP17.25■□□□□ 0.35
CACNA1A-227ENST00000636549 PDLIM1O00151 329 aa17.24■□□□□ 0.35
CACNA1A-227ENST00000636549 WNT7AO00755 349 aa17.24■□□□□ 0.35
CACNA1A-227ENST00000636549 CPOXP36551 454 aa17.24■□□□□ 0.35
CACNA1A-227ENST00000636549 SLC11A1P49279 550 aa17.24■□□□□ 0.35
CACNA1A-227ENST00000636549 FXYD4P59646 89 aa17.24■□□□□ 0.35
CACNA1A-227ENST00000636549 GAS6Q14393 721 aa17.24■□□□□ 0.35
CACNA1A-227ENST00000636549 PCBP1Q15365 356 aaKnown RBP eCLIP17.24■□□□□ 0.35
CACNA1A-227ENST00000636549 SLC15A3Q8IY34 581 aa17.24■□□□□ 0.35
CACNA1A-227ENST00000636549 KCNN3Q9UGI6 736 aa17.24■□□□□ 0.35
CACNA1A-227ENST00000636549 PDYNP01213 254 aa17.24■□□□□ 0.35
CACNA1A-227ENST00000636549 IQCCQ4KMZ1 466 aa17.24■□□□□ 0.35
CACNA1A-227ENST00000636549 FKBP1CQ5VVH2 108 aa17.24■□□□□ 0.35
CACNA1A-227ENST00000636549 PGM2L1Q6PCE3 622 aa17.24■□□□□ 0.35
CACNA1A-227ENST00000636549 AVL9Q8NBF6 648 aa17.24■□□□□ 0.35
CACNA1A-227ENST00000636549 ZNF296Q8WUU4 475 aaPredicted RBP17.24■□□□□ 0.35
CACNA1A-227ENST00000636549 CEMIPQ8WUJ3 1361 aa17.24■□□□□ 0.35
CACNA1A-227ENST00000636549 DNAJA2O60884 412 aa17.24■□□□□ 0.35
CACNA1A-227ENST00000636549 SYPP08247 313 aa17.24■□□□□ 0.35
CACNA1A-227ENST00000636549 RIDAP52758 137 aaKnown RBP17.24■□□□□ 0.35
CACNA1A-227ENST00000636549 ILF2Q12905 390 aaKnown RBP17.24■□□□□ 0.35
CACNA1A-227ENST00000636549 P2RY8Q86VZ1 359 aa17.24■□□□□ 0.35
CACNA1A-227ENST00000636549 GPR137CQ8N3F9 429 aa17.24■□□□□ 0.35
CACNA1A-227ENST00000636549 ACDQ96AP0 544 aa17.24■□□□□ 0.35
CACNA1A-227ENST00000636549 CMTM7Q96FZ5 175 aa17.24■□□□□ 0.35
CACNA1A-227ENST00000636549 TAS2R7Q9NYW3 318 aa17.24■□□□□ 0.35
CACNA1A-227ENST00000636549 ACTR10Q9NZ32 417 aa17.24■□□□□ 0.35
CACNA1A-227ENST00000636549 PPP1R11O60927 126 aaPredicted RBP17.24■□□□□ 0.35
CACNA1A-227ENST00000636549 PRKACGP22612 351 aa17.24■□□□□ 0.35
CACNA1A-227ENST00000636549 PTAFRP25105 342 aa17.24■□□□□ 0.35
CACNA1A-227ENST00000636549 LSSP48449 732 aa17.24■□□□□ 0.35
CACNA1A-227ENST00000636549 DAOAP59103 153 aa17.24■□□□□ 0.35
CACNA1A-227ENST00000636549 RUNX2Q13950 521 aa17.24■□□□□ 0.35
CACNA1A-227ENST00000636549 REM2Q8IYK8 340 aaPredicted RBP17.24■□□□□ 0.35
CACNA1A-227ENST00000636549 IRF7Q92985 503 aa17.24■□□□□ 0.35
CACNA1A-227ENST00000636549 IL17FQ96PD4 163 aa17.24■□□□□ 0.35
CACNA1A-227ENST00000636549 NUDT15Q9NV35 164 aa17.24■□□□□ 0.35
CACNA1A-227ENST00000636549 TRBC2A0A5B9 178 aa17.24■□□□□ 0.35
CACNA1A-227ENST00000636549 SNX3O60493 162 aa17.24■□□□□ 0.35
CACNA1A-227ENST00000636549 OR2B3O76000 313 aa17.24■□□□□ 0.35
CACNA1A-227ENST00000636549 GALTP07902 379 aa17.24■□□□□ 0.35
CACNA1A-227ENST00000636549 APEHP13798 732 aaKnown RBP17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms