RNA–Protein interactions for RNA: ENST00000636214.1

PNKP-225, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 805 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-225ENST00000636214 CLDN1O95832 211 aa16.84■□□□□ 0.29
PNKP-225ENST00000636214 B3GALT4O96024 378 aa16.84■□□□□ 0.29
PNKP-225ENST00000636214 STSP08842 583 aa16.84■□□□□ 0.29
PNKP-225ENST00000636214 C1GALT1C1LP0DN25 315 aa16.84■□□□□ 0.29
PNKP-225ENST00000636214 STMN1P16949 149 aa16.84■□□□□ 0.29
PNKP-225ENST00000636214 GSTM2P28161 218 aa16.84■□□□□ 0.29
PNKP-225ENST00000636214 SSTR1P30872 391 aa16.84■□□□□ 0.29
PNKP-225ENST00000636214 CASQ1P31415 396 aa16.84■□□□□ 0.29
PNKP-225ENST00000636214 SLBPQ14493 270 aaKnown RBP eCLIP16.84■□□□□ 0.29
PNKP-225ENST00000636214 OR1C1Q15619 314 aa16.84■□□□□ 0.29
PNKP-225ENST00000636214 ZNF324BQ6AW86 544 aaPredicted RBP16.84■□□□□ 0.29
PNKP-225ENST00000636214 TMIGD1Q6UXZ0 262 aa16.84■□□□□ 0.29
PNKP-225ENST00000636214 GPSM1Q86YR5 675 aa16.84■□□□□ 0.29
PNKP-225ENST00000636214 CEP97Q8IW35 865 aa16.84■□□□□ 0.29
PNKP-225ENST00000636214 CTAGE3PQ8IX95 158 aa16.84■□□□□ 0.29
PNKP-225ENST00000636214 SHISA5Q8N114 240 aa16.84■□□□□ 0.29
PNKP-225ENST00000636214 SPATA4Q8NEY3 305 aa16.84■□□□□ 0.29
PNKP-225ENST00000636214 GAL3ST3Q96A11 431 aa16.84■□□□□ 0.29
PNKP-225ENST00000636214 RHBDF1Q96CC6 855 aa16.84■□□□□ 0.29
PNKP-225ENST00000636214 UNKQ9C0B0 810 aaKnown RBP16.84■□□□□ 0.29
PNKP-225ENST00000636214 RAB17Q9H0T7 212 aa16.84■□□□□ 0.29
PNKP-225ENST00000636214 PRDM9Q9NQV7 894 aa16.84■□□□□ 0.29
PNKP-225ENST00000636214 SEC14L3Q9UDX4 400 aa16.84■□□□□ 0.29
PNKP-225ENST00000636214 TRGV8A0A0C4DH27 118 aa16.83■□□□□ 0.28
PNKP-225ENST00000636214 ANKDD1BA6NHY2 528 aa16.83■□□□□ 0.28
PNKP-225ENST00000636214 TP73O15350 636 aa16.83■□□□□ 0.28
PNKP-225ENST00000636214 RAD51CO43502 376 aa16.83■□□□□ 0.28
PNKP-225ENST00000636214 UNC5CO95185 931 aa16.83■□□□□ 0.28
PNKP-225ENST00000636214 GSTA2P09210 222 aa16.83■□□□□ 0.28
PNKP-225ENST00000636214 CCDC166P0CW27 439 aa16.83■□□□□ 0.28
PNKP-225ENST00000636214 EEF1DP29692 281 aaKnown RBP16.83■□□□□ 0.28
PNKP-225ENST00000636214 GP5P40197 560 aa16.83■□□□□ 0.28
PNKP-225ENST00000636214 TDGF1P3P51864 188 aa16.83■□□□□ 0.28
PNKP-225ENST00000636214 ATP6V0D1P61421 351 aa16.83■□□□□ 0.28
PNKP-225ENST00000636214 BTN3A2P78410 334 aa16.83■□□□□ 0.28
PNKP-225ENST00000636214 CAV1Q03135 178 aa16.83■□□□□ 0.28
PNKP-225ENST00000636214 C2orf54Q08AI8 447 aa16.83■□□□□ 0.28
PNKP-225ENST00000636214 TUBA3CQ13748 450 aa16.83■□□□□ 0.28
PNKP-225ENST00000636214 TGFBIQ15582 683 aa16.83■□□□□ 0.28
PNKP-225ENST00000636214 ZNF800Q2TB10 664 aaPredicted RBP eCLIP16.83■□□□□ 0.28
PNKP-225ENST00000636214 C1QL3Q5VWW1 255 aa16.83■□□□□ 0.28
PNKP-225ENST00000636214 H3F3CQ6NXT2 135 aa16.83■□□□□ 0.28
PNKP-225ENST00000636214 TUBA3EQ6PEY2 450 aa16.83■□□□□ 0.28
PNKP-225ENST00000636214 CCDC25Q86WR0 208 aa16.83■□□□□ 0.28
PNKP-225ENST00000636214 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP16.83■□□□□ 0.28
PNKP-225ENST00000636214 LGI4Q8N135 537 aa16.83■□□□□ 0.28
PNKP-225ENST00000636214 SNX31Q8N9S9 440 aa16.83■□□□□ 0.28
PNKP-225ENST00000636214 SEC16BQ96JE7 1060 aa16.83■□□□□ 0.28
PNKP-225ENST00000636214 RBBP8Q99708 897 aa16.83■□□□□ 0.28
PNKP-225ENST00000636214 PITHD1Q9GZP4 211 aaPredicted RBP16.83■□□□□ 0.28
PNKP-225ENST00000636214 COPS7BQ9H9Q2 264 aaPredicted RBP16.83■□□□□ 0.28
PNKP-225ENST00000636214 CAB39LQ9H9S4 337 aa16.83■□□□□ 0.28
PNKP-225ENST00000636214 KLHL1Q9NR64 748 aa16.83■□□□□ 0.28
PNKP-225ENST00000636214 DNAJC11Q9NVH1 559 aa16.83■□□□□ 0.28
PNKP-225ENST00000636214 ANKRD10Q9NXR5 420 aa16.83■□□□□ 0.28
PNKP-225ENST00000636214 GPRC5BQ9NZH0 403 aa16.83■□□□□ 0.28
PNKP-225ENST00000636214 CD274Q9NZQ7 290 aa16.83■□□□□ 0.28
PNKP-225ENST00000636214 MRPS33Q9Y291 106 aaKnown RBP16.83■□□□□ 0.28
PNKP-225ENST00000636214 MTO1Q9Y2Z2 717 aaKnown RBP16.83■□□□□ 0.28
PNKP-225ENST00000636214 PCDHGB6Q9Y5F9 930 aa16.83■□□□□ 0.28
PNKP-225ENST00000636214 CREBBPQ92793 2442 aa16.82■□□□□ 0.28
PNKP-225ENST00000636214 SAGE2PA6NJ88 616 aa16.82■□□□□ 0.28
PNKP-225ENST00000636214 FAM227AF5H4B4 570 aa16.82■□□□□ 0.28
PNKP-225ENST00000636214 PHGDHO43175 533 aaKnown RBP16.82■□□□□ 0.28
PNKP-225ENST00000636214 ERI3O43414 337 aaKnown RBP16.82■□□□□ 0.28
PNKP-225ENST00000636214 PIAS1O75925 651 aa16.82■□□□□ 0.28
PNKP-225ENST00000636214 SPRP35270 261 aaPredicted RBP16.82■□□□□ 0.28
PNKP-225ENST00000636214 GDF5P43026 501 aa16.82■□□□□ 0.28
PNKP-225ENST00000636214 SLC6A12P48065 614 aa16.82■□□□□ 0.28
PNKP-225ENST00000636214 SLMAPQ14BN4 828 aa16.82■□□□□ 0.28
PNKP-225ENST00000636214 SULT1C3Q6IMI6 304 aa16.82■□□□□ 0.28
PNKP-225ENST00000636214 C3orf62Q6ZUJ4 267 aa16.82■□□□□ 0.28
PNKP-225ENST00000636214 RAPH1Q70E73 1250 aa16.82■□□□□ 0.28
PNKP-225ENST00000636214 RPS19BP1Q86WX3 136 aaKnown RBP16.82■□□□□ 0.28
PNKP-225ENST00000636214 ADAMTS18Q8TE60 1221 aa16.82■□□□□ 0.28
PNKP-225ENST00000636214 EXT2Q93063 718 aa16.82■□□□□ 0.28
PNKP-225ENST00000636214 CDCP1Q9H5V8 836 aa16.82■□□□□ 0.28
PNKP-225ENST00000636214 SMYD2Q9NRG4 433 aa16.82■□□□□ 0.28
PNKP-225ENST00000636214 RNF112Q9ULX5 631 aa16.82■□□□□ 0.28
PNKP-225ENST00000636214 MMACHCQ9Y4U1 282 aa16.82■□□□□ 0.28
PNKP-225ENST00000636214 TCRBV9S1A1TA0A576 114 aa16.81■□□□□ 0.28
PNKP-225ENST00000636214 CLDN4O14493 209 aa16.81■□□□□ 0.28
PNKP-225ENST00000636214 CDK2AP1O14519 115 aa16.81■□□□□ 0.28
PNKP-225ENST00000636214 FCHO1O14526 889 aa16.81■□□□□ 0.28
PNKP-225ENST00000636214 B3GALT2O43825 422 aa16.81■□□□□ 0.28
PNKP-225ENST00000636214 ZG16O60844 167 aa16.81■□□□□ 0.28
PNKP-225ENST00000636214 STK16O75716 305 aa16.81■□□□□ 0.28
PNKP-225ENST00000636214 MAOAP21397 527 aa16.81■□□□□ 0.28
PNKP-225ENST00000636214 COL8A1P27658 744 aa16.81■□□□□ 0.28
PNKP-225ENST00000636214 STX2P32856 288 aa16.81■□□□□ 0.28
PNKP-225ENST00000636214 PLTPP55058 493 aa16.81■□□□□ 0.28
PNKP-225ENST00000636214 TGM3Q08188 693 aa16.81■□□□□ 0.28
PNKP-225ENST00000636214 CBLBQ13191 982 aa16.81■□□□□ 0.28
PNKP-225ENST00000636214 RCN2Q14257 317 aa16.81■□□□□ 0.28
PNKP-225ENST00000636214 ZRSR2Q15696 482 aaKnown RBP16.81■□□□□ 0.28
PNKP-225ENST00000636214 PDK4Q16654 411 aa16.81■□□□□ 0.28
PNKP-225ENST00000636214 HIST2H2ACQ16777 129 aaPredicted RBP16.81■□□□□ 0.28
PNKP-225ENST00000636214 C18orf21Q32NC0 220 aaPredicted RBP16.81■□□□□ 0.28
PNKP-225ENST00000636214 PAGE2BQ5JRK9 111 aa16.81■□□□□ 0.28
PNKP-225ENST00000636214 CDKL4Q5MAI5 379 aa16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms