RNA–Protein interactions for RNA: ENST00000636020.1

CLN6-212, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 894 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-212ENST00000636020 YIPF4Q9BSR8 244 aa16.84■□□□□ 0.29
CLN6-212ENST00000636020 FAM114A2Q9NRY5 505 aa16.84■□□□□ 0.29
CLN6-212ENST00000636020 CATSPERZQ9NTU4 200 aa16.84■□□□□ 0.29
CLN6-212ENST00000636020 ANAPC5Q9UJX4 755 aa16.84■□□□□ 0.29
CLN6-212ENST00000636020 FBXW2Q9UKT8 454 aa16.84■□□□□ 0.29
CLN6-212ENST00000636020 EFR3BQ9Y2G0 817 aa16.84■□□□□ 0.29
CLN6-212ENST00000636020 PCDHA3Q9Y5H8 950 aa16.84■□□□□ 0.29
CLN6-212ENST00000636020 TCRBV16S1A1N1A0A5B0 115 aa16.83■□□□□ 0.28
CLN6-212ENST00000636020 A8MUA0 341 aa16.83■□□□□ 0.28
CLN6-212ENST00000636020 A8MVJ9 347 aa16.83■□□□□ 0.28
CLN6-212ENST00000636020 PJA2O43164 708 aa16.83■□□□□ 0.28
CLN6-212ENST00000636020 CHST10O43529 356 aa16.83■□□□□ 0.28
CLN6-212ENST00000636020 AKR1B10O60218 316 aa16.83■□□□□ 0.28
CLN6-212ENST00000636020 HRH2P25021 359 aa16.83■□□□□ 0.28
CLN6-212ENST00000636020 ADRA1DP25100 572 aa16.83■□□□□ 0.28
CLN6-212ENST00000636020 COPS2P61201 443 aa16.83■□□□□ 0.28
CLN6-212ENST00000636020 SLC10A1Q14973 349 aa16.83■□□□□ 0.28
CLN6-212ENST00000636020 POU4F3Q15319 338 aa16.83■□□□□ 0.28
CLN6-212ENST00000636020 CTSL3PQ5NE16 218 aa16.83■□□□□ 0.28
CLN6-212ENST00000636020 EML6Q6ZMW3 1958 aa16.83■□□□□ 0.28
CLN6-212ENST00000636020 GK5Q6ZS86 529 aa16.83■□□□□ 0.28
CLN6-212ENST00000636020 YTHDF3Q7Z739 585 aaKnown RBP16.83■□□□□ 0.28
CLN6-212ENST00000636020 SLC26A11Q86WA9 606 aa16.83■□□□□ 0.28
CLN6-212ENST00000636020 GPALPP1Q8IXQ4 340 aa16.83■□□□□ 0.28
CLN6-212ENST00000636020 AFAP1L2Q8N4X5 818 aa16.83■□□□□ 0.28
CLN6-212ENST00000636020 B3GNT7Q8NFL0 401 aa16.83■□□□□ 0.28
CLN6-212ENST00000636020 IL1RL2Q9HB29 575 aa16.83■□□□□ 0.28
CLN6-212ENST00000636020 HPF1Q9NWY4 346 aa16.83■□□□□ 0.28
CLN6-212ENST00000636020 ZNF223Q9UK11 482 aaPredicted RBP16.83■□□□□ 0.28
CLN6-212ENST00000636020 IGKV3D-11A0A0A0MRZ8 115 aa16.82■□□□□ 0.28
CLN6-212ENST00000636020 ATP6AP2A0A1C7CYW4 349 aa16.82■□□□□ 0.28
CLN6-212ENST00000636020 G3V3Y1 287 aa16.82■□□□□ 0.28
CLN6-212ENST00000636020 GOLGA6L22H0YM25 854 aa16.82■□□□□ 0.28
CLN6-212ENST00000636020 CD3EAPO15446 510 aaKnown RBP16.82■□□□□ 0.28
CLN6-212ENST00000636020 LCMT2O60294 686 aaKnown RBP16.82■□□□□ 0.28
CLN6-212ENST00000636020 ATP6AP2O75787 350 aa16.82■□□□□ 0.28
CLN6-212ENST00000636020 CATP04040 527 aaKnown RBP16.82■□□□□ 0.28
CLN6-212ENST00000636020 BMP7P18075 431 aa16.82■□□□□ 0.28
CLN6-212ENST00000636020 ENDOUP21128 410 aaKnown RBP16.82■□□□□ 0.28
CLN6-212ENST00000636020 CNR1P21554 472 aa16.82■□□□□ 0.28
CLN6-212ENST00000636020 CEACAM8P31997 349 aaPredicted RBP16.82■□□□□ 0.28
CLN6-212ENST00000636020 COILP38432 576 aaPredicted RBP16.82■□□□□ 0.28
CLN6-212ENST00000636020 SORDQ00796 357 aa16.82■□□□□ 0.28
CLN6-212ENST00000636020 FOXO1Q12778 655 aa16.82■□□□□ 0.28
CLN6-212ENST00000636020 CDH17Q12864 832 aa16.82■□□□□ 0.28
CLN6-212ENST00000636020 HERC3Q15034 1050 aa16.82■□□□□ 0.28
CLN6-212ENST00000636020 HYAL4Q2M3T9 481 aa16.82■□□□□ 0.28
CLN6-212ENST00000636020 THEMIS2Q5TEJ8 643 aa16.82■□□□□ 0.28
CLN6-212ENST00000636020 IL20RBQ6UXL0 311 aa16.82■□□□□ 0.28
CLN6-212ENST00000636020 ASPGQ86U10 573 aa16.82■□□□□ 0.28
CLN6-212ENST00000636020 ULK2Q8IYT8 1036 aa16.82■□□□□ 0.28
CLN6-212ENST00000636020 FAM71DQ8N9W8 422 aa16.82■□□□□ 0.28
CLN6-212ENST00000636020 SLC13A3Q8WWT9 602 aa16.82■□□□□ 0.28
CLN6-212ENST00000636020 FAM173AQ9BQD7 235 aa16.82■□□□□ 0.28
CLN6-212ENST00000636020 LDAHQ9H6V9 325 aa16.82■□□□□ 0.28
CLN6-212ENST00000636020 SPTLC3Q9NUV7 552 aa16.82■□□□□ 0.28
CLN6-212ENST00000636020 SPRR3Q9UBC9 169 aa16.82■□□□□ 0.28
CLN6-212ENST00000636020 ZNF629Q9UEG4 869 aaPredicted RBP16.82■□□□□ 0.28
CLN6-212ENST00000636020 SBDSQ9Y3A5 250 aaKnown RBP eCLIP16.82■□□□□ 0.28
CLN6-212ENST00000636020 HCN1O60741 890 aa16.81■□□□□ 0.28
CLN6-212ENST00000636020 GALR3O60755 368 aaPredicted RBP16.81■□□□□ 0.28
CLN6-212ENST00000636020 ZNF189O75820 626 aaPredicted RBP16.81■□□□□ 0.28
CLN6-212ENST00000636020 OR6B1O95007 311 aa16.81■□□□□ 0.28
CLN6-212ENST00000636020 GAS8O95995 478 aa16.81■□□□□ 0.28
CLN6-212ENST00000636020 MAOAP21397 527 aa16.81■□□□□ 0.28
CLN6-212ENST00000636020 EIF3BP55884 814 aaKnown RBP16.81■□□□□ 0.28
CLN6-212ENST00000636020 OLR1P78380 273 aa16.81■□□□□ 0.28
CLN6-212ENST00000636020 KLHL38Q2WGJ6 581 aa16.81■□□□□ 0.28
CLN6-212ENST00000636020 ACSBG2Q5FVE4 666 aa16.81■□□□□ 0.28
CLN6-212ENST00000636020 XKR6Q5GH73 641 aa16.81■□□□□ 0.28
CLN6-212ENST00000636020 HMBOX1Q6NT76 420 aa16.81■□□□□ 0.28
CLN6-212ENST00000636020 MAATS1Q7Z4T9 603 aa16.81■□□□□ 0.28
CLN6-212ENST00000636020 TNIP2Q8NFZ5 429 aa16.81■□□□□ 0.28
CLN6-212ENST00000636020 TMEM158Q8WZ71 300 aa16.81■□□□□ 0.28
CLN6-212ENST00000636020 PIGTQ969N2 578 aa16.81■□□□□ 0.28
CLN6-212ENST00000636020 BIRC8Q96P09 236 aa16.81■□□□□ 0.28
CLN6-212ENST00000636020 PANX2Q96RD6 677 aa16.81■□□□□ 0.28
CLN6-212ENST00000636020 OSBPL8Q9BZF1 889 aa16.81■□□□□ 0.28
CLN6-212ENST00000636020 FAM129AQ9BZQ8 928 aa16.81■□□□□ 0.28
CLN6-212ENST00000636020 NECTIN3Q9NQS3 549 aa16.81■□□□□ 0.28
CLN6-212ENST00000636020 TRMT1Q9NXH9 659 aaKnown RBP16.81■□□□□ 0.28
CLN6-212ENST00000636020 VPS9D1Q9Y2B5 631 aa16.81■□□□□ 0.28
CLN6-212ENST00000636020 PCDHGB3Q9Y5G1 929 aa16.81■□□□□ 0.28
CLN6-212ENST00000636020 TRGV5A0A0B4J1U4 118 aa16.8■□□□□ 0.28
CLN6-212ENST00000636020 PRKNO60260 465 aaPredicted RBP16.8■□□□□ 0.28
CLN6-212ENST00000636020 NDUFS3O75489 264 aa16.8■□□□□ 0.28
CLN6-212ENST00000636020 HADHBP55084 474 aaKnown RBP16.8■□□□□ 0.28
CLN6-212ENST00000636020 HYAL2Q12891 473 aa16.8■□□□□ 0.28
CLN6-212ENST00000636020 KCNJ11Q14654 390 aa16.8■□□□□ 0.28
CLN6-212ENST00000636020 P3H1Q32P28 736 aa16.8■□□□□ 0.28
CLN6-212ENST00000636020 CAPN13Q6MZZ7 669 aaPredicted RBP16.8■□□□□ 0.28
CLN6-212ENST00000636020 FBXW8Q8N3Y1 598 aa16.8■□□□□ 0.28
CLN6-212ENST00000636020 FBXO15Q8NCQ5 510 aaPredicted RBP16.8■□□□□ 0.28
CLN6-212ENST00000636020 ASB15Q8WXK1 588 aa16.8■□□□□ 0.28
CLN6-212ENST00000636020 PEX13Q92968 403 aa16.8■□□□□ 0.28
CLN6-212ENST00000636020 KIAA1191Q96A73 305 aa16.8■□□□□ 0.28
CLN6-212ENST00000636020 FAM136AQ96C01 138 aa16.8■□□□□ 0.28
CLN6-212ENST00000636020 PRDM9Q9NQV7 894 aa16.8■□□□□ 0.28
CLN6-212ENST00000636020 GALPQ9UBC7 116 aa16.8■□□□□ 0.28
CLN6-212ENST00000636020 PPIEQ9UNP9 301 aaKnown RBP16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms