RNA–Protein interactions for RNA: ENST00000625423.2

VARS2-213, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2 BASIC

Gene VARS2, Length 3,362 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-213ENST00000625423 TIFAQ96CG3 184 aa10.81□□□□□ -0.68
VARS2-213ENST00000625423 ZSCAN5AQ9BUG6 496 aa10.81□□□□□ -0.68
VARS2-213ENST00000625423 BHLHE41Q9C0J9 482 aaPredicted RBP10.81□□□□□ -0.68
VARS2-213ENST00000625423 C6orf62Q9GZU0 229 aaPredicted RBP10.81□□□□□ -0.68
VARS2-213ENST00000625423 REEP4Q9H6H4 257 aa10.81□□□□□ -0.68
VARS2-213ENST00000625423 RNF167Q9H6Y7 350 aa10.81□□□□□ -0.68
VARS2-213ENST00000625423 ABCB10Q9NRK6 738 aa10.81□□□□□ -0.68
VARS2-213ENST00000625423 ZNF226Q9NYT6 803 aa10.81□□□□□ -0.68
VARS2-213ENST00000625423 COL4A6Q14031 1691 aa10.81□□□□□ -0.68
VARS2-213ENST00000625423 WASH3PC4AMC7 463 aa10.8□□□□□ -0.68
VARS2-213ENST00000625423 TGFB1P01137 390 aa10.8□□□□□ -0.68
VARS2-213ENST00000625423 EIF2DP41214 584 aaKnown RBP10.8□□□□□ -0.68
VARS2-213ENST00000625423 CCR2P41597 374 aa10.8□□□□□ -0.68
VARS2-213ENST00000625423 MAGEA8P43361 318 aa10.8□□□□□ -0.68
VARS2-213ENST00000625423 PRIM2P49643 509 aa10.8□□□□□ -0.68
VARS2-213ENST00000625423 CYP4F2P78329 520 aa10.8□□□□□ -0.68
VARS2-213ENST00000625423 ZNF763Q0D2J5 394 aa10.8□□□□□ -0.68
VARS2-213ENST00000625423 TMEM115Q12893 351 aaPredicted RBP10.8□□□□□ -0.68
VARS2-213ENST00000625423 MICAQ29983 383 aa10.8□□□□□ -0.68
VARS2-213ENST00000625423 GCNT6Q5T4J0 391 aa10.8□□□□□ -0.68
VARS2-213ENST00000625423 TMEM220Q6QAJ8 160 aa10.8□□□□□ -0.68
VARS2-213ENST00000625423 ARMCX6Q7L4S7 300 aa10.8□□□□□ -0.68
VARS2-213ENST00000625423 COMMD6Q7Z4G1 85 aa10.8□□□□□ -0.68
VARS2-213ENST00000625423 ZNF605Q86T29 641 aa10.8□□□□□ -0.68
VARS2-213ENST00000625423 SYTL1Q8IYJ3 562 aa10.8□□□□□ -0.68
VARS2-213ENST00000625423 ZNF675Q8TD23 568 aa10.8□□□□□ -0.68
VARS2-213ENST00000625423 HPS1Q92902 700 aa10.8□□□□□ -0.68
VARS2-213ENST00000625423 ZNF689Q96CS4 500 aaPredicted RBP10.8□□□□□ -0.68
VARS2-213ENST00000625423 CCM2Q9BSQ5 444 aa10.8□□□□□ -0.68
VARS2-213ENST00000625423 OR51B5Q9H339 312 aa10.8□□□□□ -0.68
VARS2-213ENST00000625423 TRIM39Q9HCM9 518 aa10.8□□□□□ -0.68
VARS2-213ENST00000625423 SCHIP1Q9P0W5 487 aaPredicted RBP10.8□□□□□ -0.68
VARS2-213ENST00000625423 ATP6V1HQ9UI12 483 aa10.8□□□□□ -0.68
VARS2-213ENST00000625423 ZNF229Q9UJW7 825 aa10.8□□□□□ -0.68
VARS2-213ENST00000625423 SLC6A14Q9UN76 642 aa10.8□□□□□ -0.68
VARS2-213ENST00000625423 MAPRE3Q9UPY8 281 aa10.8□□□□□ -0.68
VARS2-213ENST00000625423 MAP4K5Q9Y4K4 846 aa10.8□□□□□ -0.68
VARS2-213ENST00000625423 LOC100506127A0A0U1RQW1 187 aa10.8□□□□□ -0.68
VARS2-213ENST00000625423 KDM1AO60341 852 aa10.8□□□□□ -0.68
VARS2-213ENST00000625423 CNOT3O75175 753 aaKnown RBP10.8□□□□□ -0.68
VARS2-213ENST00000625423 C8AP07357 584 aa10.8□□□□□ -0.68
VARS2-213ENST00000625423 ANXA8P13928 327 aa10.8□□□□□ -0.68
VARS2-213ENST00000625423 UGT2B10P36537 528 aa10.8□□□□□ -0.68
VARS2-213ENST00000625423 MAGEA10P43363 369 aaPredicted RBP10.8□□□□□ -0.68
VARS2-213ENST00000625423 TUBA1BP68363 451 aa10.8□□□□□ -0.68
VARS2-213ENST00000625423 DEFB103AP81534 67 aa10.8□□□□□ -0.68
VARS2-213ENST00000625423 MEF2AQ02078 507 aaPredicted RBP10.8□□□□□ -0.68
VARS2-213ENST00000625423 SLC13A2Q13183 592 aa10.8□□□□□ -0.68
VARS2-213ENST00000625423 NCCRP1Q6ZVX7 275 aaPredicted RBP10.8□□□□□ -0.68
VARS2-213ENST00000625423 TUBA1AQ71U36 451 aa10.8□□□□□ -0.68
VARS2-213ENST00000625423 SLC46A3Q7Z3Q1 461 aa10.8□□□□□ -0.68
VARS2-213ENST00000625423 STX19Q8N4C7 294 aa10.8□□□□□ -0.68
VARS2-213ENST00000625423 KIAA1958Q8N8K9 716 aa10.8□□□□□ -0.68
VARS2-213ENST00000625423 WDR48Q8TAF3 677 aa10.8□□□□□ -0.68
VARS2-213ENST00000625423 ZNF480Q8WV37 535 aa10.8□□□□□ -0.68
VARS2-213ENST00000625423 GLYATL1Q969I3 302 aa10.8□□□□□ -0.68
VARS2-213ENST00000625423 FOPNLQ96NB1 174 aa10.8□□□□□ -0.68
VARS2-213ENST00000625423 LINC00597Q9H2U6 94 aa10.8□□□□□ -0.68
VARS2-213ENST00000625423 FKBP14Q9NWM8 211 aa10.8□□□□□ -0.68
VARS2-213ENST00000625423 HCFC1R1Q9NWW0 138 aa10.8□□□□□ -0.68
VARS2-213ENST00000625423 POFUT2Q9Y2G5 429 aa10.8□□□□□ -0.68
VARS2-213ENST00000625423 AP1M2Q9Y6Q5 423 aa10.8□□□□□ -0.68
VARS2-213ENST00000625423 METTL15A6NJ78 407 aa10.8□□□□□ -0.68
VARS2-213ENST00000625423 QSOX1O00391 747 aa10.8□□□□□ -0.68
VARS2-213ENST00000625423 CTSLP07711 333 aa10.8□□□□□ -0.68
VARS2-213ENST00000625423 TYRP14679 529 aa10.8□□□□□ -0.68
VARS2-213ENST00000625423 PXNP49023 591 aaPredicted RBP10.8□□□□□ -0.68
VARS2-213ENST00000625423 PRLHRP49683 370 aa10.8□□□□□ -0.68
VARS2-213ENST00000625423 CRISP3P54108 245 aa10.8□□□□□ -0.68
VARS2-213ENST00000625423 TBPL1P62380 186 aa10.8□□□□□ -0.68
VARS2-213ENST00000625423 PCDH1Q08174 1060 aa10.8□□□□□ -0.68
VARS2-213ENST00000625423 SLBPQ14493 270 aaKnown RBP eCLIP10.8□□□□□ -0.68
VARS2-213ENST00000625423 MPEG1Q2M385 716 aa10.8□□□□□ -0.68
VARS2-213ENST00000625423 MLIPQ5VWP3 458 aa10.8□□□□□ -0.68
VARS2-213ENST00000625423 KLHDC8AQ8IYD2 350 aa10.8□□□□□ -0.68
VARS2-213ENST00000625423 OR52N2Q8NGI0 321 aa10.8□□□□□ -0.68
VARS2-213ENST00000625423 VWCEQ96DN2 955 aa10.8□□□□□ -0.68
VARS2-213ENST00000625423 OR51E2Q9H255 320 aa10.8□□□□□ -0.68
VARS2-213ENST00000625423 MMP27Q9H306 513 aa10.8□□□□□ -0.68
VARS2-213ENST00000625423 ZNF197O14709 1029 aa10.79□□□□□ -0.68
VARS2-213ENST00000625423 PCDH17O14917 1159 aa10.79□□□□□ -0.68
VARS2-213ENST00000625423 CCL16O15467 120 aa10.79□□□□□ -0.68
VARS2-213ENST00000625423 TLL1O43897 1013 aa10.79□□□□□ -0.68
VARS2-213ENST00000625423 LILRB3O75022 631 aa10.79□□□□□ -0.68
VARS2-213ENST00000625423 PTHP01270 115 aa10.79□□□□□ -0.68
VARS2-213ENST00000625423 ADORA3P0DMS8 318 aa10.79□□□□□ -0.68
VARS2-213ENST00000625423 GABRB1P18505 474 aa10.79□□□□□ -0.68
VARS2-213ENST00000625423 XPAP23025 273 aaPredicted RBP10.79□□□□□ -0.68
VARS2-213ENST00000625423 TMED10P49755 219 aaKnown RBP10.79□□□□□ -0.68
VARS2-213ENST00000625423 C2orf80Q0P641 193 aa10.79□□□□□ -0.68
VARS2-213ENST00000625423 ST3GAL4Q11206 333 aa10.79□□□□□ -0.68
VARS2-213ENST00000625423 GANABQ14697 944 aaKnown RBP10.79□□□□□ -0.68
VARS2-213ENST00000625423 STARD3Q14849 445 aa10.79□□□□□ -0.68
VARS2-213ENST00000625423 USP43Q70EL4 1123 aa10.79□□□□□ -0.68
VARS2-213ENST00000625423 RNF130Q86XS8 419 aa10.79□□□□□ -0.68
VARS2-213ENST00000625423 GOT1L1Q8NHS2 421 aaPredicted RBP10.79□□□□□ -0.68
VARS2-213ENST00000625423 PUM2Q8TB72 1066 aaKnown RBP eCLIP10.79□□□□□ -0.68
VARS2-213ENST00000625423 GTPBP3Q969Y2 492 aaKnown RBP10.79□□□□□ -0.68
VARS2-213ENST00000625423 FAM83CQ9BQN1 747 aa10.79□□□□□ -0.68
VARS2-213ENST00000625423 TMEM165Q9HC07 324 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms