RNA–Protein interactions for RNA: ENST00000622183.1

CPNE3-213, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 156 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-213ENST00000622183 CSNK2BP67870 215 aa4.3□□□□□ -1.72
CPNE3-213ENST00000622183 GPR50Q13585 617 aa4.3□□□□□ -1.72
CPNE3-213ENST00000622183 GK2Q14410 553 aaPredicted RBP4.3□□□□□ -1.72
CPNE3-213ENST00000622183 TMEM132DQ14C87 1099 aa4.3□□□□□ -1.72
CPNE3-213ENST00000622183 FFAR4Q5NUL3 377 aa4.3□□□□□ -1.72
CPNE3-213ENST00000622183 TCEAL6Q6IPX3 200 aa4.3□□□□□ -1.72
CPNE3-213ENST00000622183 C17orf107Q6ZR85 190 aa4.3□□□□□ -1.72
CPNE3-213ENST00000622183 MIER3Q7Z3K6 550 aa4.3□□□□□ -1.72
CPNE3-213ENST00000622183 DCLK2Q8N568 766 aa4.3□□□□□ -1.72
CPNE3-213ENST00000622183 TMEM190Q8WZ59 177 aa4.3□□□□□ -1.72
CPNE3-213ENST00000622183 CASP10Q92851 521 aa4.3□□□□□ -1.72
CPNE3-213ENST00000622183 SPATA13Q96N96 652 aa4.3□□□□□ -1.72
CPNE3-213ENST00000622183 NECTIN4Q96NY8 510 aa4.3□□□□□ -1.72
CPNE3-213ENST00000622183 FUCA2Q9BTY2 467 aa4.3□□□□□ -1.72
CPNE3-213ENST00000622183 TEX13AQ9BXU3 409 aaPredicted RBP4.3□□□□□ -1.72
CPNE3-213ENST00000622183 SDF2L1Q9HCN8 221 aa4.3□□□□□ -1.72
CPNE3-213ENST00000622183 KCNMB3Q9NPA1 279 aa4.3□□□□□ -1.72
CPNE3-213ENST00000622183 RNF186Q9NXI6 227 aa4.3□□□□□ -1.72
CPNE3-213ENST00000622183 UBQLN2Q9UHD9 624 aa4.3□□□□□ -1.72
CPNE3-213ENST00000622183 PSORS1C1Q9UIG5 152 aa4.3□□□□□ -1.72
CPNE3-213ENST00000622183 TSPAN16Q9UKR8 245 aa4.3□□□□□ -1.72
CPNE3-213ENST00000622183 WDR37Q9Y2I8 494 aa4.3□□□□□ -1.72
CPNE3-213ENST00000622183 RNF103-CHMP3A0A140T963 221 aa4.29□□□□□ -1.72
CPNE3-213ENST00000622183 ERVV-2B6SEH9 535 aa4.29□□□□□ -1.72
CPNE3-213ENST00000622183 TLR4O00206 839 aa4.29□□□□□ -1.72
CPNE3-213ENST00000622183 RNF103O00237 685 aa4.29□□□□□ -1.72
CPNE3-213ENST00000622183 SLC28A1O00337 649 aa4.29□□□□□ -1.72
CPNE3-213ENST00000622183 SLC1A7O00341 560 aa4.29□□□□□ -1.72
CPNE3-213ENST00000622183 PSMD3O43242 534 aa4.29□□□□□ -1.72
CPNE3-213ENST00000622183 SYT7O43581 403 aa4.29□□□□□ -1.72
CPNE3-213ENST00000622183 STBD1O95210 358 aa4.29□□□□□ -1.72
CPNE3-213ENST00000622183 ALPPP05187 535 aa4.29□□□□□ -1.72
CPNE3-213ENST00000622183 ALPPL2P10696 532 aa4.29□□□□□ -1.72
CPNE3-213ENST00000622183 GNB3P16520 340 aa4.29□□□□□ -1.72
CPNE3-213ENST00000622183 CEBPBP17676 345 aa4.29□□□□□ -1.72
CPNE3-213ENST00000622183 ITGB6P18564 788 aa4.29□□□□□ -1.72
CPNE3-213ENST00000622183 UGT1A6P19224 532 aa4.29□□□□□ -1.72
CPNE3-213ENST00000622183 CHRNB4P30926 498 aa4.29□□□□□ -1.72
CPNE3-213ENST00000622183 SOX3P41225 446 aa4.29□□□□□ -1.72
CPNE3-213ENST00000622183 TNFSF10P50591 281 aa4.29□□□□□ -1.72
CPNE3-213ENST00000622183 HUNKP57058 714 aa4.29□□□□□ -1.72
CPNE3-213ENST00000622183 GALK2Q01415 458 aa4.29□□□□□ -1.72
CPNE3-213ENST00000622183 IL1RL1Q01638 556 aa4.29□□□□□ -1.72
CPNE3-213ENST00000622183 GUCY2DQ02846 1103 aa4.29□□□□□ -1.72
CPNE3-213ENST00000622183 WASHC5Q12768 1159 aa4.29□□□□□ -1.72
CPNE3-213ENST00000622183 CEACAM7Q14002 265 aa4.29□□□□□ -1.72
CPNE3-213ENST00000622183 TAB1Q15750 504 aa4.29□□□□□ -1.72
CPNE3-213ENST00000622183 LRRC37A5PQ49AS3 106 aa4.29□□□□□ -1.72
CPNE3-213ENST00000622183 ATP1A1-AS1Q5TC04 95 aa4.29□□□□□ -1.72
CPNE3-213ENST00000622183 PLPP4Q5VZY2 271 aa4.29□□□□□ -1.72
CPNE3-213ENST00000622183 MEX3BQ6ZN04 569 aaKnown RBP4.29□□□□□ -1.72
CPNE3-213ENST00000622183 CYP4V2Q6ZWL3 525 aaPredicted RBP4.29□□□□□ -1.72
CPNE3-213ENST00000622183 NR2C2APQ86WQ0 139 aa4.29□□□□□ -1.72
CPNE3-213ENST00000622183 STHQ8IWL8 128 aa4.29□□□□□ -1.72
CPNE3-213ENST00000622183 FBXW8Q8N3Y1 598 aa4.29□□□□□ -1.72
CPNE3-213ENST00000622183 HDDC3Q8N4P3 179 aa4.29□□□□□ -1.72
CPNE3-213ENST00000622183 RAB42Q8N4Z0 105 aa4.29□□□□□ -1.72
CPNE3-213ENST00000622183 MRPL43Q8N983 215 aaKnown RBP4.29□□□□□ -1.72
CPNE3-213ENST00000622183 NEK11Q8NG66 645 aa4.29□□□□□ -1.72
CPNE3-213ENST00000622183 OR4D10Q8NGI6 311 aa4.29□□□□□ -1.72
CPNE3-213ENST00000622183 EXOC6Q8TAG9 804 aa4.29□□□□□ -1.72
CPNE3-213ENST00000622183 SPATA18Q8TC71 538 aa4.29□□□□□ -1.72
CPNE3-213ENST00000622183 CD99L2Q8TCZ2 262 aa4.29□□□□□ -1.72
CPNE3-213ENST00000622183 AZIN2Q96A70 460 aa4.29□□□□□ -1.72
CPNE3-213ENST00000622183 SLCO4A1Q96BD0 722 aa4.29□□□□□ -1.72
CPNE3-213ENST00000622183 BPIFA2Q96DR5 249 aa4.29□□□□□ -1.72
CPNE3-213ENST00000622183 C2orf48Q96LS8 159 aa4.29□□□□□ -1.72
CPNE3-213ENST00000622183 PGLYRP2Q96PD5 576 aa4.29□□□□□ -1.72
CPNE3-213ENST00000622183 PCDHB18PQ96TA0 734 aa4.29□□□□□ -1.72
CPNE3-213ENST00000622183 IL12RB2Q99665 862 aa4.29□□□□□ -1.72
CPNE3-213ENST00000622183 UBAC1Q9BSL1 405 aa4.29□□□□□ -1.72
CPNE3-213ENST00000622183 CCM2Q9BSQ5 444 aa4.29□□□□□ -1.72
CPNE3-213ENST00000622183 MTIF3Q9H2K0 278 aaKnown RBP4.29□□□□□ -1.72
CPNE3-213ENST00000622183 VIPAS39Q9H9C1 493 aa4.29□□□□□ -1.72
CPNE3-213ENST00000622183 SYTL2Q9HCH5 934 aa4.29□□□□□ -1.72
CPNE3-213ENST00000622183 ZNF580Q9UK33 172 aa4.29□□□□□ -1.72
CPNE3-213ENST00000622183 POMT2Q9UKY4 750 aa4.29□□□□□ -1.72
CPNE3-213ENST00000622183 STRAPQ9Y3F4 350 aaKnown RBP4.29□□□□□ -1.72
CPNE3-213ENST00000622183 ETV7Q9Y603 341 aa4.29□□□□□ -1.72
CPNE3-213ENST00000622183 DISP3Q9P2K9 1392 aa4.28□□□□□ -1.72
CPNE3-213ENST00000622183 KRT87PA6NCN2 255 aa4.28□□□□□ -1.72
CPNE3-213ENST00000622183 PRSS44E7EML9 344 aa4.28□□□□□ -1.72
CPNE3-213ENST00000622183 MAGEB2O15479 319 aa4.28□□□□□ -1.72
CPNE3-213ENST00000622183 ZNF432O94892 652 aa4.28□□□□□ -1.72
CPNE3-213ENST00000622183 CHRNGP07510 517 aa4.28□□□□□ -1.72
CPNE3-213ENST00000622183 NUDT17P0C025 328 aa4.28□□□□□ -1.72
CPNE3-213ENST00000622183 PCP11498 1178 aaKnown RBP4.28□□□□□ -1.72
CPNE3-213ENST00000622183 ANPEPP15144 967 aa4.28□□□□□ -1.72
CPNE3-213ENST00000622183 CTNNA2P26232 953 aa4.28□□□□□ -1.72
CPNE3-213ENST00000622183 OR1D2P34982 312 aa4.28□□□□□ -1.72
CPNE3-213ENST00000622183 CLK1P49759 484 aaKnown RBP4.28□□□□□ -1.72
CPNE3-213ENST00000622183 PAX9P55771 341 aa4.28□□□□□ -1.72
CPNE3-213ENST00000622183 XGP55808 180 aa4.28□□□□□ -1.72
CPNE3-213ENST00000622183 CNTN1Q12860 1018 aa4.28□□□□□ -1.72
CPNE3-213ENST00000622183 GIT2Q14161 759 aa4.28□□□□□ -1.72
CPNE3-213ENST00000622183 SMC1AQ14683 1233 aaKnown RBP4.28□□□□□ -1.72
CPNE3-213ENST00000622183 PDK1Q15118 436 aa4.28□□□□□ -1.72
CPNE3-213ENST00000622183 STX1AQ16623 288 aa4.28□□□□□ -1.72
CPNE3-213ENST00000622183 ZNF876PQ49A33 203 aa4.28□□□□□ -1.72
CPNE3-213ENST00000622183 FAM106AQ4KMX7 169 aa4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms