RNA–Protein interactions for RNA: ENST00000621150.3

TNFAIP3-211, Transcript of TNF alpha induced protein 3, humanhuman

TSL 5 BASIC

Gene TNFAIP3, Length 1,613 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-211ENST00000621150 RUVBL1Q9Y265 456 aaKnown RBP11.89□□□□□ -0.51
TNFAIP3-211ENST00000621150 PCM1Q15154 2024 aa11.89□□□□□ -0.51
TNFAIP3-211ENST00000621150 TRBV5-3A0A0A0MS03 114 aa11.88□□□□□ -0.51
TNFAIP3-211ENST00000621150 IGKV1-8A0A0C4DH67 115 aa11.88□□□□□ -0.51
TNFAIP3-211ENST00000621150 PRAMEF33A0A0G2JMD5 474 aa11.88□□□□□ -0.51
TNFAIP3-211ENST00000621150 SPTY2D1-AS1A0A0U1RR47 76 aa11.88□□□□□ -0.51
TNFAIP3-211ENST00000621150 PDZK1P1A8MUH7 402 aa11.88□□□□□ -0.51
TNFAIP3-211ENST00000621150 SCAMP1O15126 338 aa11.88□□□□□ -0.51
TNFAIP3-211ENST00000621150 KLHL18O94889 574 aa11.88□□□□□ -0.51
TNFAIP3-211ENST00000621150 IL6P05231 212 aa11.88□□□□□ -0.51
TNFAIP3-211ENST00000621150 HSD17B1P14061 328 aa11.88□□□□□ -0.51
TNFAIP3-211ENST00000621150 PSMB5P28074 263 aa11.88□□□□□ -0.51
TNFAIP3-211ENST00000621150 PEBP1P30086 187 aaKnown RBP11.88□□□□□ -0.51
TNFAIP3-211ENST00000621150 DGKQP52824 942 aa11.88□□□□□ -0.51
TNFAIP3-211ENST00000621150 RPS13P62277 151 aaKnown RBP11.88□□□□□ -0.51
TNFAIP3-211ENST00000621150 REEP5Q00765 189 aa11.88□□□□□ -0.51
TNFAIP3-211ENST00000621150 EIF2B5Q13144 721 aaKnown RBP11.88□□□□□ -0.51
TNFAIP3-211ENST00000621150 SPANXN4Q5MJ08 99 aa11.88□□□□□ -0.51
TNFAIP3-211ENST00000621150 SAMD4BQ5PRF9 694 aaKnown RBP11.88□□□□□ -0.51
TNFAIP3-211ENST00000621150 C6orf10Q5SRN2 563 aa11.88□□□□□ -0.51
TNFAIP3-211ENST00000621150 RNF111Q6ZNA4 994 aa11.88□□□□□ -0.51
TNFAIP3-211ENST00000621150 FAM9CQ8IZT9 166 aa11.88□□□□□ -0.51
TNFAIP3-211ENST00000621150 C2orf73Q8N5S3 287 aaPredicted RBP11.88□□□□□ -0.51
TNFAIP3-211ENST00000621150 PUM2Q8TB72 1066 aaKnown RBP eCLIP11.88□□□□□ -0.51
TNFAIP3-211ENST00000621150 GPBAR1Q8TDU6 330 aa11.88□□□□□ -0.51
TNFAIP3-211ENST00000621150 GTF2H4Q92759 462 aa11.88□□□□□ -0.51
TNFAIP3-211ENST00000621150 GATA6Q92908 595 aa11.88□□□□□ -0.51
TNFAIP3-211ENST00000621150 NINJ1Q92982 152 aa11.88□□□□□ -0.51
TNFAIP3-211ENST00000621150 EGLN2Q96KS0 407 aa11.88□□□□□ -0.51
TNFAIP3-211ENST00000621150 PITHD1Q9GZP4 211 aaPredicted RBP11.88□□□□□ -0.51
TNFAIP3-211ENST00000621150 CAAP1Q9H8G2 361 aa11.88□□□□□ -0.51
TNFAIP3-211ENST00000621150 ZNF624Q9P2J8 865 aaPredicted RBP11.88□□□□□ -0.51
TNFAIP3-211ENST00000621150 KLK13Q9UKR3 277 aa11.88□□□□□ -0.51
TNFAIP3-211ENST00000621150 MAN2B2Q9Y2E5 1009 aa11.88□□□□□ -0.51
TNFAIP3-211ENST00000621150 HEBP2Q9Y5Z4 205 aa11.88□□□□□ -0.51
TNFAIP3-211ENST00000621150 ANKRD11Q6UB99 2663 aaPredicted RBP11.87□□□□□ -0.51
TNFAIP3-211ENST00000621150 H3BNX3 289 aa11.87□□□□□ -0.51
TNFAIP3-211ENST00000621150 FKBP6O75344 327 aa11.87□□□□□ -0.51
TNFAIP3-211ENST00000621150 PGRP06401 933 aa11.87□□□□□ -0.51
TNFAIP3-211ENST00000621150 HNRNPFP52597 415 aaKnown RBP11.87□□□□□ -0.51
TNFAIP3-211ENST00000621150 CLNS1AP54105 237 aaKnown RBP11.87□□□□□ -0.51
TNFAIP3-211ENST00000621150 MEF2AQ02078 507 aaPredicted RBP11.87□□□□□ -0.51
TNFAIP3-211ENST00000621150 PRDX1Q06830 199 aaKnown RBP11.87□□□□□ -0.51
TNFAIP3-211ENST00000621150 TRAP1Q12931 704 aaKnown RBP11.87□□□□□ -0.51
TNFAIP3-211ENST00000621150 NFYCQ13952 458 aa11.87□□□□□ -0.51
TNFAIP3-211ENST00000621150 TRIM25Q14258 630 aaKnown RBP11.87□□□□□ -0.51
TNFAIP3-211ENST00000621150 FZD2Q14332 565 aa11.87□□□□□ -0.51
TNFAIP3-211ENST00000621150 CAPRIN1Q14444 709 aaKnown RBP11.87□□□□□ -0.51
TNFAIP3-211ENST00000621150 RCN1Q15293 331 aa11.87□□□□□ -0.51
TNFAIP3-211ENST00000621150 FAM174BQ3ZCQ3 159 aa11.87□□□□□ -0.51
TNFAIP3-211ENST00000621150 GLRX5Q86SX6 157 aa11.87□□□□□ -0.51
TNFAIP3-211ENST00000621150 C17orf64Q86WR6 236 aa11.87□□□□□ -0.51
TNFAIP3-211ENST00000621150 RNF148Q8N7C7 305 aa11.87□□□□□ -0.51
TNFAIP3-211ENST00000621150 BAHD1Q8TBE0 780 aaPredicted RBP11.87□□□□□ -0.51
TNFAIP3-211ENST00000621150 SLC13A3Q8WWT9 602 aa11.87□□□□□ -0.51
TNFAIP3-211ENST00000621150 UBE2E3Q969T4 207 aa11.87□□□□□ -0.51
TNFAIP3-211ENST00000621150 HSH2DQ96JZ2 352 aa11.87□□□□□ -0.51
TNFAIP3-211ENST00000621150 SLC6A18Q96N87 628 aa11.87□□□□□ -0.51
TNFAIP3-211ENST00000621150 S100A14Q9HCY8 104 aa11.87□□□□□ -0.51
TNFAIP3-211ENST00000621150 SERHLQ9NQF3 203 aa11.87□□□□□ -0.51
TNFAIP3-211ENST00000621150 ADA2Q9NZK5 511 aa11.87□□□□□ -0.51
TNFAIP3-211ENST00000621150 GMPR2Q9P2T1 348 aaKnown RBP11.87□□□□□ -0.51
TNFAIP3-211ENST00000621150 KLF15Q9UIH9 416 aa11.87□□□□□ -0.51
TNFAIP3-211ENST00000621150 PCDHGB2Q9Y5G2 931 aa11.87□□□□□ -0.51
TNFAIP3-211ENST00000621150 ITPR1Q14643 2758 aa11.87□□□□□ -0.51
TNFAIP3-211ENST00000621150 A0A1W2PR77 199 aa11.86□□□□□ -0.51
TNFAIP3-211ENST00000621150 H0Y3Z8 333 aa11.86□□□□□ -0.51
TNFAIP3-211ENST00000621150 VILLO15195 856 aa11.86□□□□□ -0.51
TNFAIP3-211ENST00000621150 FLRT2O43155 660 aa11.86□□□□□ -0.51
TNFAIP3-211ENST00000621150 SCN2BO60939 215 aa11.86□□□□□ -0.51
TNFAIP3-211ENST00000621150 FTH1P19P0C7X4 201 aa11.86□□□□□ -0.51
TNFAIP3-211ENST00000621150 PCNAP12004 261 aa11.86□□□□□ -0.51
TNFAIP3-211ENST00000621150 F3P13726 295 aa11.86□□□□□ -0.51
TNFAIP3-211ENST00000621150 NDUFS1P28331 727 aa11.86□□□□□ -0.51
TNFAIP3-211ENST00000621150 PTPN6P29350 595 aa11.86□□□□□ -0.51
TNFAIP3-211ENST00000621150 MSX2P35548 267 aaPredicted RBP11.86□□□□□ -0.51
TNFAIP3-211ENST00000621150 SLC19A1P41440 591 aa11.86□□□□□ -0.51
TNFAIP3-211ENST00000621150 CTSKP43235 329 aa11.86□□□□□ -0.51
TNFAIP3-211ENST00000621150 CSNK1G2P78368 415 aa11.86□□□□□ -0.51
TNFAIP3-211ENST00000621150 TSTA3Q13630 321 aaPredicted RBP11.86□□□□□ -0.51
TNFAIP3-211ENST00000621150 DDX39BQ13838 428 aaKnown RBP11.86□□□□□ -0.51
TNFAIP3-211ENST00000621150 SPIN4Q56A73 249 aa11.86□□□□□ -0.51
TNFAIP3-211ENST00000621150 THEMIS2Q5TEJ8 643 aa11.86□□□□□ -0.51
TNFAIP3-211ENST00000621150 ICE2Q659A1 982 aa11.86□□□□□ -0.51
TNFAIP3-211ENST00000621150 TMIGD1Q6UXZ0 262 aa11.86□□□□□ -0.51
TNFAIP3-211ENST00000621150 MSANTD1Q6ZTZ1 278 aa11.86□□□□□ -0.51
TNFAIP3-211ENST00000621150 CAMKMTQ7Z624 323 aa11.86□□□□□ -0.51
TNFAIP3-211ENST00000621150 DHDDSQ86SQ9 333 aa11.86□□□□□ -0.51
TNFAIP3-211ENST00000621150 MSRB3Q8IXL7 192 aa11.86□□□□□ -0.51
TNFAIP3-211ENST00000621150 METTL4Q8N3J2 472 aa11.86□□□□□ -0.51
TNFAIP3-211ENST00000621150 RAB42Q8N4Z0 105 aa11.86□□□□□ -0.51
TNFAIP3-211ENST00000621150 C1orf52Q8N6N3 182 aaKnown RBP11.86□□□□□ -0.51
TNFAIP3-211ENST00000621150 ANKRD53Q8N9V6 530 aa11.86□□□□□ -0.51
TNFAIP3-211ENST00000621150 FAM156AQ8NDB6 213 aa11.86□□□□□ -0.51
TNFAIP3-211ENST00000621150 CLHC1Q8NHS4 586 aa11.86□□□□□ -0.51
TNFAIP3-211ENST00000621150 TSSK3Q96PN8 268 aa11.86□□□□□ -0.51
TNFAIP3-211ENST00000621150 ZBTB18Q99592 522 aa11.86□□□□□ -0.51
TNFAIP3-211ENST00000621150 SARGQ9BW04 601 aa11.86□□□□□ -0.51
TNFAIP3-211ENST00000621150 ACAT2Q9BWD1 397 aa11.86□□□□□ -0.51
TNFAIP3-211ENST00000621150 XKR8Q9H6D3 395 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms