RNA–Protein interactions for RNA: ENST00000620514.1

HMGN3-203, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

TSL 3 BASIC

Gene HMGN3, Length 1,010 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-203ENST00000620514 SERPINA6P08185 405 aa16.13■□□□□ 0.17
HMGN3-203ENST00000620514 EDN3P14138 238 aa16.13■□□□□ 0.17
HMGN3-203ENST00000620514 KCNC1P48547 511 aa16.13■□□□□ 0.17
HMGN3-203ENST00000620514 HSPA7P48741 367 aa16.13■□□□□ 0.17
HMGN3-203ENST00000620514 OR4D2P58180 307 aa16.13■□□□□ 0.17
HMGN3-203ENST00000620514 RAB10P61026 200 aa16.13■□□□□ 0.17
HMGN3-203ENST00000620514 ATP6V0D1P61421 351 aa16.13■□□□□ 0.17
HMGN3-203ENST00000620514 SKP1P63208 163 aa16.13■□□□□ 0.17
HMGN3-203ENST00000620514 CAV1Q03135 178 aa16.13■□□□□ 0.17
HMGN3-203ENST00000620514 DLG1Q12959 904 aa16.13■□□□□ 0.17
HMGN3-203ENST00000620514 GRTP1Q5TC63 336 aa16.13■□□□□ 0.17
HMGN3-203ENST00000620514 H3F3CQ6NXT2 135 aa16.13■□□□□ 0.17
HMGN3-203ENST00000620514 CMC1Q7Z7K0 106 aa16.13■□□□□ 0.17
HMGN3-203ENST00000620514 BEST3Q8N1M1 668 aa16.13■□□□□ 0.17
HMGN3-203ENST00000620514 BCORP1Q8N888 145 aa16.13■□□□□ 0.17
HMGN3-203ENST00000620514 M1APQ8TC57 530 aa16.13■□□□□ 0.17
HMGN3-203ENST00000620514 UBXN10Q96LJ8 280 aa16.13■□□□□ 0.17
HMGN3-203ENST00000620514 LPAR4Q99677 370 aa16.13■□□□□ 0.17
HMGN3-203ENST00000620514 SLX1AQ9BQ83 275 aa16.13■□□□□ 0.17
HMGN3-203ENST00000620514 PHACTR1Q9C0D0 580 aa16.13■□□□□ 0.17
HMGN3-203ENST00000620514 OLAHQ9NV23 265 aa16.13■□□□□ 0.17
HMGN3-203ENST00000620514 DNAJC11Q9NVH1 559 aa16.13■□□□□ 0.17
HMGN3-203ENST00000620514 SLC5A6Q9Y289 635 aa16.13■□□□□ 0.17
HMGN3-203ENST00000620514 NAV2Q8IVL1 2488 aa16.12■□□□□ 0.17
HMGN3-203ENST00000620514 POLEQ07864 2286 aa16.12■□□□□ 0.17
HMGN3-203ENST00000620514 A0A0G2JN53 185 aa16.12■□□□□ 0.17
HMGN3-203ENST00000620514 OR5H15A6NDH6 313 aa16.12■□□□□ 0.17
HMGN3-203ENST00000620514 URADA6NGE7 173 aa16.12■□□□□ 0.17
HMGN3-203ENST00000620514 H2AFYO75367 372 aaKnown RBP16.12■□□□□ 0.17
HMGN3-203ENST00000620514 MAOAP21397 527 aa16.12■□□□□ 0.17
HMGN3-203ENST00000620514 JAK1P23458 1154 aa16.12■□□□□ 0.17
HMGN3-203ENST00000620514 HNRNPH1P31943 449 aaKnown RBP16.12■□□□□ 0.17
HMGN3-203ENST00000620514 SPRP35270 261 aaPredicted RBP16.12■□□□□ 0.17
HMGN3-203ENST00000620514 GGT5P36269 586 aa16.12■□□□□ 0.17
HMGN3-203ENST00000620514 SLC26A5P58743 744 aa16.12■□□□□ 0.17
HMGN3-203ENST00000620514 BTN3A2P78410 334 aa16.12■□□□□ 0.17
HMGN3-203ENST00000620514 GUCY2DQ02846 1103 aa16.12■□□□□ 0.17
HMGN3-203ENST00000620514 SLMAPQ14BN4 828 aa16.12■□□□□ 0.17
HMGN3-203ENST00000620514 EXT1Q16394 746 aa16.12■□□□□ 0.17
HMGN3-203ENST00000620514 ACER2Q5QJU3 275 aa16.12■□□□□ 0.17
HMGN3-203ENST00000620514 ZNF324BQ6AW86 544 aaPredicted RBP16.12■□□□□ 0.17
HMGN3-203ENST00000620514 ADNP2Q6IQ32 1131 aa16.12■□□□□ 0.17
HMGN3-203ENST00000620514 NIPAL1Q6NVV3 410 aa16.12■□□□□ 0.17
HMGN3-203ENST00000620514 TMIGD1Q6UXZ0 262 aa16.12■□□□□ 0.17
HMGN3-203ENST00000620514 CRLF3Q8IUI8 442 aa16.12■□□□□ 0.17
HMGN3-203ENST00000620514 CA13Q8N1Q1 262 aa16.12■□□□□ 0.17
HMGN3-203ENST00000620514 TCAIMQ8N3R3 496 aa16.12■□□□□ 0.17
HMGN3-203ENST00000620514 SNX31Q8N9S9 440 aa16.12■□□□□ 0.17
HMGN3-203ENST00000620514 CCT6BQ92526 530 aa16.12■□□□□ 0.17
HMGN3-203ENST00000620514 EXT2Q93063 718 aa16.12■□□□□ 0.17
HMGN3-203ENST00000620514 KIAA1191Q96A73 305 aa16.12■□□□□ 0.17
HMGN3-203ENST00000620514 ZNF354BQ96LW1 612 aa16.12■□□□□ 0.17
HMGN3-203ENST00000620514 PTCHD1Q96NR3 888 aa16.12■□□□□ 0.17
HMGN3-203ENST00000620514 MMP25Q9NPA2 562 aa16.12■□□□□ 0.17
HMGN3-203ENST00000620514 CD274Q9NZQ7 290 aa16.12■□□□□ 0.17
HMGN3-203ENST00000620514 TEKT2Q9UIF3 430 aa16.12■□□□□ 0.17
HMGN3-203ENST00000620514 OSGIN2Q9Y236 505 aa16.12■□□□□ 0.17
HMGN3-203ENST00000620514 ASB1Q9Y576 335 aa16.12■□□□□ 0.17
HMGN3-203ENST00000620514 SVILO95425 2214 aa16.11■□□□□ 0.17
HMGN3-203ENST00000620514 WIPF3A6NGB9 483 aa16.11■□□□□ 0.17
HMGN3-203ENST00000620514 PRMT3O60678 531 aa16.11■□□□□ 0.17
HMGN3-203ENST00000620514 PRAMEF2O60811 474 aa16.11■□□□□ 0.17
HMGN3-203ENST00000620514 STK16O75716 305 aa16.11■□□□□ 0.17
HMGN3-203ENST00000620514 TBX6O95947 436 aaPredicted RBP16.11■□□□□ 0.17
HMGN3-203ENST00000620514 SLC35E2BP0CK96 405 aa16.11■□□□□ 0.17
HMGN3-203ENST00000620514 RNH1P13489 461 aaKnown RBP16.11■□□□□ 0.17
HMGN3-203ENST00000620514 TDGF1P3P51864 188 aa16.11■□□□□ 0.17
HMGN3-203ENST00000620514 STXBP1P61764 594 aaKnown RBP16.11■□□□□ 0.17
HMGN3-203ENST00000620514 RUNX2Q13950 521 aa16.11■□□□□ 0.17
HMGN3-203ENST00000620514 SULT1C3Q6IMI6 304 aa16.11■□□□□ 0.17
HMGN3-203ENST00000620514 QSOX2Q6ZRP7 698 aa16.11■□□□□ 0.17
HMGN3-203ENST00000620514 VN1R5Q7Z5H4 357 aa16.11■□□□□ 0.17
HMGN3-203ENST00000620514 CYP4X1Q8N118 509 aa16.11■□□□□ 0.17
HMGN3-203ENST00000620514 KIF2BQ8N4N8 673 aa16.11■□□□□ 0.17
HMGN3-203ENST00000620514 PDPRQ8NCN5 879 aa16.11■□□□□ 0.17
HMGN3-203ENST00000620514 GAL3ST3Q96A11 431 aa16.11■□□□□ 0.17
HMGN3-203ENST00000620514 MS4A6EQ96DS6 147 aa16.11■□□□□ 0.17
HMGN3-203ENST00000620514 C5orf34Q96MH7 638 aa16.11■□□□□ 0.17
HMGN3-203ENST00000620514 LRRC1Q9BTT6 524 aa16.11■□□□□ 0.17
HMGN3-203ENST00000620514 ALG9Q9H6U8 611 aa16.11■□□□□ 0.17
HMGN3-203ENST00000620514 CLK4Q9HAZ1 481 aaKnown RBP16.11■□□□□ 0.17
HMGN3-203ENST00000620514 NECTIN3Q9NQS3 549 aa16.11■□□□□ 0.17
HMGN3-203ENST00000620514 ANKRD10Q9NXR5 420 aa16.11■□□□□ 0.17
HMGN3-203ENST00000620514 GPRC5BQ9NZH0 403 aa16.11■□□□□ 0.17
HMGN3-203ENST00000620514 PTBP2Q9UKA9 531 aaKnown RBP16.11■□□□□ 0.17
HMGN3-203ENST00000620514 RNF112Q9ULX5 631 aa16.11■□□□□ 0.17
HMGN3-203ENST00000620514 PSMD12O00232 456 aaPredicted RBP16.1■□□□□ 0.17
HMGN3-203ENST00000620514 CLGNO14967 610 aa16.1■□□□□ 0.17
HMGN3-203ENST00000620514 EPORP19235 508 aa16.1■□□□□ 0.17
HMGN3-203ENST00000620514 TFEBP19484 476 aa16.1■□□□□ 0.17
HMGN3-203ENST00000620514 CD22P20273 847 aa16.1■□□□□ 0.17
HMGN3-203ENST00000620514 STX2P32856 288 aa16.1■□□□□ 0.17
HMGN3-203ENST00000620514 PMP22Q01453 160 aa16.1■□□□□ 0.17
HMGN3-203ENST00000620514 DOC2AQ14183 400 aa16.1■□□□□ 0.17
HMGN3-203ENST00000620514 CDKL4Q5MAI5 379 aa16.1■□□□□ 0.17
HMGN3-203ENST00000620514 UBAP2Q5T6F2 1119 aaKnown RBP16.1■□□□□ 0.17
HMGN3-203ENST00000620514 RAPH1Q70E73 1250 aa16.1■□□□□ 0.17
HMGN3-203ENST00000620514 KRT78Q8N1N4 520 aa16.1■□□□□ 0.17
HMGN3-203ENST00000620514 TTLQ8NG68 377 aa16.1■□□□□ 0.17
HMGN3-203ENST00000620514 NR4A3Q92570 626 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms