RNA–Protein interactions for RNA: ENST00000616710.4

TNFRSF11A-205, Transcript of TNF receptor superfamily member 11a, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TNFRSF11A, Length 3,809 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11A-205ENST00000616710 RGS1Q08116 209 aa13.51□□□□□ -0.25
TNFRSF11A-205ENST00000616710 KDM4DQ6B0I6 523 aa13.51□□□□□ -0.25
TNFRSF11A-205ENST00000616710 LIPIQ6XZB0 460 aa13.51□□□□□ -0.25
TNFRSF11A-205ENST00000616710 ANKS3Q6ZW76 656 aa13.51□□□□□ -0.25
TNFRSF11A-205ENST00000616710 MARCH9Q86YJ5 346 aa13.51□□□□□ -0.25
TNFRSF11A-205ENST00000616710 SETD6Q8TBK2 473 aa13.51□□□□□ -0.25
TNFRSF11A-205ENST00000616710 FAM126AQ9BYI3 521 aaPredicted RBP13.51□□□□□ -0.25
TNFRSF11A-205ENST00000616710 TPT1P8Q9HAU6 139 aa13.51□□□□□ -0.25
TNFRSF11A-205ENST00000616710 NDRG4Q9ULP0 352 aaKnown RBP13.51□□□□□ -0.25
TNFRSF11A-205ENST00000616710 TNPO3Q9Y5L0 923 aaKnown RBP13.51□□□□□ -0.25
TNFRSF11A-205ENST00000616710 A0A1W2PPK0 400 aa13.5□□□□□ -0.25
TNFRSF11A-205ENST00000616710 CD8B2A6NJW9 211 aa13.5□□□□□ -0.25
TNFRSF11A-205ENST00000616710 ADM5C9JUS6 153 aa13.5□□□□□ -0.25
TNFRSF11A-205ENST00000616710 TRBC1P01850 177 aa13.5□□□□□ -0.25
TNFRSF11A-205ENST00000616710 IGFBP1P08833 259 aaPredicted RBP13.5□□□□□ -0.25
TNFRSF11A-205ENST00000616710 CD8BP10966 210 aa13.5□□□□□ -0.25
TNFRSF11A-205ENST00000616710 ENPP1P22413 925 aa13.5□□□□□ -0.25
TNFRSF11A-205ENST00000616710 HNMTP50135 292 aa13.5□□□□□ -0.25
TNFRSF11A-205ENST00000616710 CLCN4P51793 760 aa13.5□□□□□ -0.25
TNFRSF11A-205ENST00000616710 NFKB2Q00653 900 aa13.5□□□□□ -0.25
TNFRSF11A-205ENST00000616710 PCBP1Q15365 356 aaKnown RBP eCLIP13.5□□□□□ -0.25
TNFRSF11A-205ENST00000616710 OTUD1Q5VV17 481 aaPredicted RBP13.5□□□□□ -0.25
TNFRSF11A-205ENST00000616710 CAPN13Q6MZZ7 669 aaPredicted RBP13.5□□□□□ -0.25
TNFRSF11A-205ENST00000616710 LINGO4Q6UY18 593 aa13.5□□□□□ -0.25
TNFRSF11A-205ENST00000616710 FGD2Q7Z6J4 655 aa13.5□□□□□ -0.25
TNFRSF11A-205ENST00000616710 MCCC1Q96RQ3 725 aaPredicted RBP13.5□□□□□ -0.25
TNFRSF11A-205ENST00000616710 GSDMCQ9BYG8 508 aa13.5□□□□□ -0.25
TNFRSF11A-205ENST00000616710 NLNQ9BYT8 704 aa13.5□□□□□ -0.25
TNFRSF11A-205ENST00000616710 TM6SF2Q9BZW4 377 aa13.5□□□□□ -0.25
TNFRSF11A-205ENST00000616710 ZNF304Q9HCX3 659 aa13.5□□□□□ -0.25
TNFRSF11A-205ENST00000616710 EDARQ9UNE0 448 aa13.5□□□□□ -0.25
TNFRSF11A-205ENST00000616710 DOT1LQ8TEK3 1739 aa13.5□□□□□ -0.25
TNFRSF11A-205ENST00000616710 CEP350Q5VT06 3117 aa13.5□□□□□ -0.25
TNFRSF11A-205ENST00000616710 SOWAHBA6NEL2 793 aa13.5□□□□□ -0.25
TNFRSF11A-205ENST00000616710 SLC25A14O95258 325 aaPredicted RBP13.5□□□□□ -0.25
TNFRSF11A-205ENST00000616710 C1QBP02746 253 aa13.5□□□□□ -0.25
TNFRSF11A-205ENST00000616710 LGALS2P05162 132 aa13.5□□□□□ -0.25
TNFRSF11A-205ENST00000616710 IRF1P10914 325 aa13.5□□□□□ -0.25
TNFRSF11A-205ENST00000616710 RPS5P46782 204 aaKnown RBP13.5□□□□□ -0.25
TNFRSF11A-205ENST00000616710 EPHA5P54756 1037 aa13.5□□□□□ -0.25
TNFRSF11A-205ENST00000616710 KIAA1024LP59773 190 aa13.5□□□□□ -0.25
TNFRSF11A-205ENST00000616710 DSTNP60981 165 aa13.5□□□□□ -0.25
TNFRSF11A-205ENST00000616710 KYAT1Q16773 422 aa13.5□□□□□ -0.25
TNFRSF11A-205ENST00000616710 PIANPQ8IYJ0 282 aa13.5□□□□□ -0.25
TNFRSF11A-205ENST00000616710 C3orf58Q8NDZ4 430 aa13.5□□□□□ -0.25
TNFRSF11A-205ENST00000616710 CRELD1Q96HD1 420 aa13.5□□□□□ -0.25
TNFRSF11A-205ENST00000616710 ENAMQ9NRM1 1142 aa13.5□□□□□ -0.25
TNFRSF11A-205ENST00000616710 ACSL6Q9UKU0 697 aa13.5□□□□□ -0.25
TNFRSF11A-205ENST00000616710 SAP18O00422 153 aaKnown RBP13.5□□□□□ -0.25
TNFRSF11A-205ENST00000616710 SYN3O14994 580 aa13.5□□□□□ -0.25
TNFRSF11A-205ENST00000616710 NPPAP01160 153 aa13.5□□□□□ -0.25
TNFRSF11A-205ENST00000616710 ANXA3P12429 323 aa13.5□□□□□ -0.25
TNFRSF11A-205ENST00000616710 JUNDP17535 347 aa13.5□□□□□ -0.25
TNFRSF11A-205ENST00000616710 OC90Q02509 493 aaPredicted RBP13.5□□□□□ -0.25
TNFRSF11A-205ENST00000616710 PTGES3Q15185 160 aaKnown RBP13.5□□□□□ -0.25
TNFRSF11A-205ENST00000616710 KLHL6Q8WZ60 621 aa13.5□□□□□ -0.25
TNFRSF11A-205ENST00000616710 SERPINB11Q96P15 392 aa13.5□□□□□ -0.25
TNFRSF11A-205ENST00000616710 NELL2Q99435 816 aa13.5□□□□□ -0.25
TNFRSF11A-205ENST00000616710 SRRQ9GZT4 340 aa13.5□□□□□ -0.25
TNFRSF11A-205ENST00000616710 PCDHB16Q9NRJ7 776 aa13.5□□□□□ -0.25
TNFRSF11A-205ENST00000616710 COPZ2Q9P299 210 aa13.5□□□□□ -0.25
TNFRSF11A-205ENST00000616710 RAI2Q9Y5P3 530 aa13.5□□□□□ -0.25
TNFRSF11A-205ENST00000616710 TOGARAM1Q9Y4F4 1720 aa13.49□□□□□ -0.25
TNFRSF11A-205ENST00000616710 SLC28A1O00337 649 aa13.49□□□□□ -0.25
TNFRSF11A-205ENST00000616710 INPPL1O15357 1258 aa13.49□□□□□ -0.25
TNFRSF11A-205ENST00000616710 RGS11O94810 467 aa13.49□□□□□ -0.25
TNFRSF11A-205ENST00000616710 RETP07949 1114 aa13.49□□□□□ -0.25
TNFRSF11A-205ENST00000616710 PEPDP12955 493 aa13.49□□□□□ -0.25
TNFRSF11A-205ENST00000616710 EPORP19235 508 aa13.49□□□□□ -0.25
TNFRSF11A-205ENST00000616710 LHCGRP22888 699 aa13.49□□□□□ -0.25
TNFRSF11A-205ENST00000616710 ZBTB37Q5TC79 503 aa13.49□□□□□ -0.25
TNFRSF11A-205ENST00000616710 ZNF782Q6ZMW2 699 aaPredicted RBP13.49□□□□□ -0.25
TNFRSF11A-205ENST00000616710 IZUMO1Q8IYV9 350 aa13.49□□□□□ -0.25
TNFRSF11A-205ENST00000616710 LRRC52Q8N7C0 313 aa13.49□□□□□ -0.25
TNFRSF11A-205ENST00000616710 OR7D4Q8NG98 312 aa13.49□□□□□ -0.25
TNFRSF11A-205ENST00000616710 OR52P1PQ8NH57 321 aa13.49□□□□□ -0.25
TNFRSF11A-205ENST00000616710 HACL1Q9UJ83 578 aa13.49□□□□□ -0.25
TNFRSF11A-205ENST00000616710 GPR52Q9Y2T5 361 aa13.49□□□□□ -0.25
TNFRSF11A-205ENST00000616710 PCDHB9Q9Y5E1 797 aa13.49□□□□□ -0.25
TNFRSF11A-205ENST00000616710 TLR4O00206 839 aa13.49□□□□□ -0.25
TNFRSF11A-205ENST00000616710 PCDH17O14917 1159 aa13.49□□□□□ -0.25
TNFRSF11A-205ENST00000616710 PNPLA4P41247 253 aa13.49□□□□□ -0.25
TNFRSF11A-205ENST00000616710 ALDH9A1P49189 494 aa13.49□□□□□ -0.25
TNFRSF11A-205ENST00000616710 EXOSC2Q13868 293 aaKnown RBP13.49□□□□□ -0.25
TNFRSF11A-205ENST00000616710 CDKL4Q5MAI5 379 aa13.49□□□□□ -0.25
TNFRSF11A-205ENST00000616710 SLC35F1Q5T1Q4 408 aa13.49□□□□□ -0.25
TNFRSF11A-205ENST00000616710 IRAK1BP1Q5VVH5 260 aa13.49□□□□□ -0.25
TNFRSF11A-205ENST00000616710 ZNF367Q7RTV3 350 aa13.49□□□□□ -0.25
TNFRSF11A-205ENST00000616710 ADAMTSL2Q86TH1 951 aa13.49□□□□□ -0.25
TNFRSF11A-205ENST00000616710 CRYBG2Q8N1P7 616 aa13.49□□□□□ -0.25
TNFRSF11A-205ENST00000616710 THEM5Q8N1Q8 247 aa13.49□□□□□ -0.25
TNFRSF11A-205ENST00000616710 SCRN2Q96FV2 425 aa13.49□□□□□ -0.25
TNFRSF11A-205ENST00000616710 SMARCD1Q96GM5 515 aa13.49□□□□□ -0.25
TNFRSF11A-205ENST00000616710 BTBD2Q9BX70 525 aa13.49□□□□□ -0.25
TNFRSF11A-205ENST00000616710 DERL2Q9GZP9 239 aa13.49□□□□□ -0.25
TNFRSF11A-205ENST00000616710 ACTL8Q9H568 366 aa13.49□□□□□ -0.25
TNFRSF11A-205ENST00000616710 B3GNT2Q9NY97 397 aa13.49□□□□□ -0.25
TNFRSF11A-205ENST00000616710 OR6C2Q9NZP2 312 aa13.49□□□□□ -0.25
TNFRSF11A-205ENST00000616710 EVPLQ92817 2033 aa13.49□□□□□ -0.25
TNFRSF11A-205ENST00000616710 TEX51A0A1B0GUA7 166 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms