RNA–Protein interactions for RNA: ENST00000616395.4

TRAPPC3-209, Transcript of trafficking protein particle complex 3, humanhuman

TSL 3 BASIC

Gene TRAPPC3, Length 1,336 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-209ENST00000616395 IST1P53990 364 aa16.68■□□□□ 0.26
TRAPPC3-209ENST00000616395 TAS2R39P59534 338 aa16.68■□□□□ 0.26
TRAPPC3-209ENST00000616395 KLC1Q07866 573 aa16.68■□□□□ 0.26
TRAPPC3-209ENST00000616395 ITIH4Q14624 930 aa16.68■□□□□ 0.26
TRAPPC3-209ENST00000616395 ZNF658BQ4V348 819 aaPredicted RBP16.68■□□□□ 0.26
TRAPPC3-209ENST00000616395 SPPL2CQ8IUH8 684 aa16.68■□□□□ 0.26
TRAPPC3-209ENST00000616395 MCATQ8IVS2 390 aaKnown RBP16.68■□□□□ 0.26
TRAPPC3-209ENST00000616395 DTWD1Q8N5C7 304 aa16.68■□□□□ 0.26
TRAPPC3-209ENST00000616395 OR5AR1Q8NGP9 310 aa16.68■□□□□ 0.26
TRAPPC3-209ENST00000616395 SUN3Q8TAQ9 357 aa16.68■□□□□ 0.26
TRAPPC3-209ENST00000616395 MRPL57Q9BQC6 102 aaKnown RBP16.68■□□□□ 0.26
TRAPPC3-209ENST00000616395 AARSD1Q9BTE6 412 aaKnown RBP16.68■□□□□ 0.26
TRAPPC3-209ENST00000616395 CUTCQ9NTM9 273 aa16.68■□□□□ 0.26
TRAPPC3-209ENST00000616395 KLHL20Q9Y2M5 609 aa16.68■□□□□ 0.26
TRAPPC3-209ENST00000616395 CRYL1Q9Y2S2 319 aa16.68■□□□□ 0.26
TRAPPC3-209ENST00000616395 MAU2Q9Y6X3 613 aa16.68■□□□□ 0.26
TRAPPC3-209ENST00000616395 MAP1AP78559 2803 aaPredicted RBP16.67■□□□□ 0.26
TRAPPC3-209ENST00000616395 QSOX1O00391 747 aa16.67■□□□□ 0.26
TRAPPC3-209ENST00000616395 PRMT5O14744 637 aaPredicted RBP16.67■□□□□ 0.26
TRAPPC3-209ENST00000616395 PHGDHO43175 533 aaKnown RBP16.67■□□□□ 0.26
TRAPPC3-209ENST00000616395 PROCP04070 461 aa16.67■□□□□ 0.26
TRAPPC3-209ENST00000616395 SERPINA7P05543 415 aa16.67■□□□□ 0.26
TRAPPC3-209ENST00000616395 CELA2AP08217 269 aa16.67■□□□□ 0.26
TRAPPC3-209ENST00000616395 F7P08709 466 aaPredicted RBP16.67■□□□□ 0.26
TRAPPC3-209ENST00000616395 TPBGLP0DKB5 382 aa16.67■□□□□ 0.26
TRAPPC3-209ENST00000616395 DRD4P21917 467 aa16.67■□□□□ 0.26
TRAPPC3-209ENST00000616395 FDXRP22570 491 aa16.67■□□□□ 0.26
TRAPPC3-209ENST00000616395 STX3Q13277 289 aa16.67■□□□□ 0.26
TRAPPC3-209ENST00000616395 ACAP2Q15057 778 aa16.67■□□□□ 0.26
TRAPPC3-209ENST00000616395 ZSCAN26Q16670 478 aa16.67■□□□□ 0.26
TRAPPC3-209ENST00000616395 ATG9BQ674R7 924 aa16.67■□□□□ 0.26
TRAPPC3-209ENST00000616395 PTRHD1Q6GMV3 140 aaKnown RBP16.67■□□□□ 0.26
TRAPPC3-209ENST00000616395 KIRREL3Q8IZU9 778 aa16.67■□□□□ 0.26
TRAPPC3-209ENST00000616395 CHDHQ8NE62 594 aaPredicted RBP16.67■□□□□ 0.26
TRAPPC3-209ENST00000616395 LKAAEAR1Q8TD35 194 aa16.67■□□□□ 0.26
TRAPPC3-209ENST00000616395 CA5BP1Q8WTZ4 195 aa16.67■□□□□ 0.26
TRAPPC3-209ENST00000616395 CXXC4Q9H2H0 198 aa16.67■□□□□ 0.26
TRAPPC3-209ENST00000616395 MRPL46Q9H2W6 279 aaKnown RBP16.67■□□□□ 0.26
TRAPPC3-209ENST00000616395 TRMT6Q9UJA5 497 aaKnown RBP16.67■□□□□ 0.26
TRAPPC3-209ENST00000616395 ISM1B1AKI9 464 aa16.66■□□□□ 0.26
TRAPPC3-209ENST00000616395 FAM227AF5H4B4 570 aa16.66■□□□□ 0.26
TRAPPC3-209ENST00000616395 BMP10O95393 424 aa16.66■□□□□ 0.26
TRAPPC3-209ENST00000616395 SLC35E2BP0CK96 405 aa16.66■□□□□ 0.26
TRAPPC3-209ENST00000616395 COX6A1P12074 109 aa16.66■□□□□ 0.26
TRAPPC3-209ENST00000616395 MAGP20916 626 aa16.66■□□□□ 0.26
TRAPPC3-209ENST00000616395 RPS3P23396 243 aaKnown RBP eCLIP16.66■□□□□ 0.26
TRAPPC3-209ENST00000616395 PEBP1P30086 187 aaKnown RBP16.66■□□□□ 0.26
TRAPPC3-209ENST00000616395 FMO4P31512 558 aa16.66■□□□□ 0.26
TRAPPC3-209ENST00000616395 ATP6V0D1P61421 351 aa16.66■□□□□ 0.26
TRAPPC3-209ENST00000616395 NDUFAF7Q7L592 441 aa16.66■□□□□ 0.26
TRAPPC3-209ENST00000616395 SPATA21Q7Z572 469 aa16.66■□□□□ 0.26
TRAPPC3-209ENST00000616395 CRLF3Q8IUI8 442 aa16.66■□□□□ 0.26
TRAPPC3-209ENST00000616395 STT3BQ8TCJ2 826 aa16.66■□□□□ 0.26
TRAPPC3-209ENST00000616395 THAP3Q8WTV1 239 aaPredicted RBP16.66■□□□□ 0.26
TRAPPC3-209ENST00000616395 LPGAT1Q92604 370 aa16.66■□□□□ 0.26
TRAPPC3-209ENST00000616395 GPR137Q96N19 417 aa16.66■□□□□ 0.26
TRAPPC3-209ENST00000616395 PANX3Q96QZ0 392 aa16.66■□□□□ 0.26
TRAPPC3-209ENST00000616395 NDNQ99608 321 aa16.66■□□□□ 0.26
TRAPPC3-209ENST00000616395 FOXC2Q99958 501 aa16.66■□□□□ 0.26
TRAPPC3-209ENST00000616395 ELAC2Q9BQ52 826 aaKnown RBP16.66■□□□□ 0.26
TRAPPC3-209ENST00000616395 RNF32Q9H0A6 362 aa16.66■□□□□ 0.26
TRAPPC3-209ENST00000616395 FGFR1OP2Q9NVK5 253 aa16.66■□□□□ 0.26
TRAPPC3-209ENST00000616395 TMEM216Q9P0N5 145 aa16.66■□□□□ 0.26
TRAPPC3-209ENST00000616395 KLHL14Q9P2G3 628 aa16.66■□□□□ 0.26
TRAPPC3-209ENST00000616395 C3orf18Q9UK00 162 aa16.66■□□□□ 0.26
TRAPPC3-209ENST00000616395 TMCO1Q9UM00 188 aa16.66■□□□□ 0.26
TRAPPC3-209ENST00000616395 OR5H15A6NDH6 313 aa16.65■□□□□ 0.26
TRAPPC3-209ENST00000616395 EDF1O60869 148 aaKnown RBP16.65■□□□□ 0.26
TRAPPC3-209ENST00000616395 SMIM24O75264 130 aa16.65■□□□□ 0.26
TRAPPC3-209ENST00000616395 WFS1O76024 890 aa16.65■□□□□ 0.26
TRAPPC3-209ENST00000616395 SERPINE1P05121 402 aa16.65■□□□□ 0.26
TRAPPC3-209ENST00000616395 CHRM3P20309 590 aa16.65■□□□□ 0.26
TRAPPC3-209ENST00000616395 RGS4P49798 205 aa16.65■□□□□ 0.26
TRAPPC3-209ENST00000616395 RAB28P51157 221 aa16.65■□□□□ 0.26
TRAPPC3-209ENST00000616395 GRM7Q14831 915 aa16.65■□□□□ 0.26
TRAPPC3-209ENST00000616395 CHI3L2Q15782 390 aa16.65■□□□□ 0.26
TRAPPC3-209ENST00000616395 TTLL9Q3SXZ7 439 aa16.65■□□□□ 0.26
TRAPPC3-209ENST00000616395 LRRC8EQ6NSJ5 796 aa16.65■□□□□ 0.26
TRAPPC3-209ENST00000616395 FAM47EQ6ZV65 393 aa16.65■□□□□ 0.26
TRAPPC3-209ENST00000616395 TMEM200AQ86VY9 491 aa16.65■□□□□ 0.26
TRAPPC3-209ENST00000616395 SLC22A9Q8IVM8 553 aa16.65■□□□□ 0.26
TRAPPC3-209ENST00000616395 KCTD4Q8WVF5 259 aa16.65■□□□□ 0.26
TRAPPC3-209ENST00000616395 KCNJ9Q92806 393 aa16.65■□□□□ 0.26
TRAPPC3-209ENST00000616395 SDCCAG3Q96C92 435 aa16.65■□□□□ 0.26
TRAPPC3-209ENST00000616395 SIKE1Q9BRV8 207 aa16.65■□□□□ 0.26
TRAPPC3-209ENST00000616395 TSPAN10Q9H1Z9 355 aaPredicted RBP16.65■□□□□ 0.26
TRAPPC3-209ENST00000616395 OR6C2Q9NZP2 312 aa16.65■□□□□ 0.26
TRAPPC3-209ENST00000616395 TDRKHQ9Y2W6 561 aaKnown RBP16.65■□□□□ 0.26
TRAPPC3-209ENST00000616395 IQCF5A8MTL0 148 aa16.64■□□□□ 0.25
TRAPPC3-209ENST00000616395 TMEM114B3SHH9 223 aa16.64■□□□□ 0.25
TRAPPC3-209ENST00000616395 KPNA5O15131 536 aa16.64■□□□□ 0.25
TRAPPC3-209ENST00000616395 ZNHIT1O43257 154 aa16.64■□□□□ 0.25
TRAPPC3-209ENST00000616395 TRIM13O60858 407 aa16.64■□□□□ 0.25
TRAPPC3-209ENST00000616395 TGDSO95455 350 aa16.64■□□□□ 0.25
TRAPPC3-209ENST00000616395 ZGLP1P0C6A0 271 aa16.64■□□□□ 0.25
TRAPPC3-209ENST00000616395 CCDC166P0CW27 439 aa16.64■□□□□ 0.25
TRAPPC3-209ENST00000616395 IGFBP2P18065 325 aa16.64■□□□□ 0.25
TRAPPC3-209ENST00000616395 BGNP21810 368 aa16.64■□□□□ 0.25
TRAPPC3-209ENST00000616395 NAA20P61599 178 aa16.64■□□□□ 0.25
TRAPPC3-209ENST00000616395 FOXD4Q12950 439 aaPredicted RBP16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms