RNA–Protein interactions for RNA: ENST00000616033.4

MSH6-214, Transcript of mutS homolog 6, humanhuman

TSL 5 BASIC

Gene MSH6, Length 3,429 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-214ENST00000616033 LINC00299Q6ZSB3 139 aa12.67□□□□□ -0.38
MSH6-214ENST00000616033 SHFQ7M4L6 423 aa12.67□□□□□ -0.38
MSH6-214ENST00000616033 PTOV1Q86YD1 416 aa12.67□□□□□ -0.38
MSH6-214ENST00000616033 OR8H3Q8N146 312 aa12.67□□□□□ -0.38
MSH6-214ENST00000616033 FAM109AQ8N4B1 249 aa12.67□□□□□ -0.38
MSH6-214ENST00000616033 C19orf18Q8NEA5 215 aa12.67□□□□□ -0.38
MSH6-214ENST00000616033 ATP6V1C2Q8NEY4 427 aa12.67□□□□□ -0.38
MSH6-214ENST00000616033 FBLIM1Q8WUP2 373 aa12.67□□□□□ -0.38
MSH6-214ENST00000616033 FOXJ1Q92949 421 aa12.67□□□□□ -0.38
MSH6-214ENST00000616033 PSKH2Q96QS6 385 aa12.67□□□□□ -0.38
MSH6-214ENST00000616033 FAM129BQ96TA1 746 aa12.67□□□□□ -0.38
MSH6-214ENST00000616033 ADAM2Q99965 735 aa12.67□□□□□ -0.38
MSH6-214ENST00000616033 TRIM45Q9H8W5 580 aaPredicted RBP12.67□□□□□ -0.38
MSH6-214ENST00000616033 TNFRSF10BO14763 440 aa12.67□□□□□ -0.38
MSH6-214ENST00000616033 CLDN7O95471 211 aa12.67□□□□□ -0.38
MSH6-214ENST00000616033 HLA-EP13747 358 aa12.67□□□□□ -0.38
MSH6-214ENST00000616033 PSMA1P25786 263 aaKnown RBP12.67□□□□□ -0.38
MSH6-214ENST00000616033 SLC6A4P31645 630 aa12.67□□□□□ -0.38
MSH6-214ENST00000616033 THPOP40225 353 aa12.67□□□□□ -0.38
MSH6-214ENST00000616033 MAN2A2P49641 1150 aa12.67□□□□□ -0.38
MSH6-214ENST00000616033 CLDN8P56748 225 aa12.67□□□□□ -0.38
MSH6-214ENST00000616033 ZNF79Q15937 498 aa12.67□□□□□ -0.38
MSH6-214ENST00000616033 SSX1Q16384 188 aa12.67□□□□□ -0.38
MSH6-214ENST00000616033 PARP15Q460N3 678 aa12.67□□□□□ -0.38
MSH6-214ENST00000616033 NOXRED1Q6NXP6 359 aa12.67□□□□□ -0.38
MSH6-214ENST00000616033 C16orf62Q7Z3J2 963 aa12.67□□□□□ -0.38
MSH6-214ENST00000616033 CALHM3Q86XJ0 350 aa12.67□□□□□ -0.38
MSH6-214ENST00000616033 TEX26Q8N6G2 289 aa12.67□□□□□ -0.38
MSH6-214ENST00000616033 CDCP1Q9H5V8 836 aa12.67□□□□□ -0.38
MSH6-214ENST00000616033 VPS9D1Q9Y2B5 631 aa12.67□□□□□ -0.38
MSH6-214ENST00000616033 CFAP20Q9Y6A4 193 aaKnown RBP12.67□□□□□ -0.38
MSH6-214ENST00000616033 LOC102723532A0A0G2JNH3 316 aa12.66□□□□□ -0.38
MSH6-214ENST00000616033 FAM240BA0A1B0GVZ2 78 aa12.66□□□□□ -0.38
MSH6-214ENST00000616033 HMX3A6NHT5 357 aa12.66□□□□□ -0.38
MSH6-214ENST00000616033 NT5C1B-RDH14C9J2C7 533 aa12.66□□□□□ -0.38
MSH6-214ENST00000616033 SERPINI2O75830 405 aa12.66□□□□□ -0.38
MSH6-214ENST00000616033 GZMMP51124 257 aa12.66□□□□□ -0.38
MSH6-214ENST00000616033 GPR68Q15743 365 aa12.66□□□□□ -0.38
MSH6-214ENST00000616033 TATDN3Q17R31 274 aa12.66□□□□□ -0.38
MSH6-214ENST00000616033 FLYWCH1Q4VC44 716 aa12.66□□□□□ -0.38
MSH6-214ENST00000616033 IER5LQ5T953 404 aa12.66□□□□□ -0.38
MSH6-214ENST00000616033 SLX4IPQ5VYV7 408 aa12.66□□□□□ -0.38
MSH6-214ENST00000616033 PLEKHH3Q7Z736 793 aa12.66□□□□□ -0.38
MSH6-214ENST00000616033 FAM124AQ86V42 546 aa12.66□□□□□ -0.38
MSH6-214ENST00000616033 ZNF280BQ86YH2 543 aa12.66□□□□□ -0.38
MSH6-214ENST00000616033 CARNMT1Q8N4J0 409 aa12.66□□□□□ -0.38
MSH6-214ENST00000616033 IQCF1Q8N6M8 205 aa12.66□□□□□ -0.38
MSH6-214ENST00000616033 SLAIN1Q8ND83 568 aa12.66□□□□□ -0.38
MSH6-214ENST00000616033 OTULINQ96BN8 352 aa12.66□□□□□ -0.38
MSH6-214ENST00000616033 SLC22A4Q9H015 551 aa12.66□□□□□ -0.38
MSH6-214ENST00000616033 SPATA6Q9NWH7 488 aaPredicted RBP12.66□□□□□ -0.38
MSH6-214ENST00000616033 HCN4Q9Y3Q4 1203 aa12.66□□□□□ -0.38
MSH6-214ENST00000616033 GSAPA4D1B5 854 aa12.66□□□□□ -0.38
MSH6-214ENST00000616033 ENTPD6O75354 484 aa12.66□□□□□ -0.38
MSH6-214ENST00000616033 CCNB2O95067 398 aa12.66□□□□□ -0.38
MSH6-214ENST00000616033 ANXA5P08758 320 aa12.66□□□□□ -0.38
MSH6-214ENST00000616033 DDCP20711 480 aa12.66□□□□□ -0.38
MSH6-214ENST00000616033 PTNP21246 168 aa12.66□□□□□ -0.38
MSH6-214ENST00000616033 CD72P21854 359 aa12.66□□□□□ -0.38
MSH6-214ENST00000616033 RPS3P23396 243 aaKnown RBP eCLIP12.66□□□□□ -0.385e-7■■■□□ 16.7
MSH6-214ENST00000616033 GPC1P35052 558 aa12.66□□□□□ -0.38
MSH6-214ENST00000616033 CCT3P49368 545 aaKnown RBP12.66□□□□□ -0.38
MSH6-214ENST00000616033 RORCP51449 518 aa12.66□□□□□ -0.38
MSH6-214ENST00000616033 CDC42P60953 191 aa12.66□□□□□ -0.38
MSH6-214ENST00000616033 RHOAP61586 193 aa12.66□□□□□ -0.38
MSH6-214ENST00000616033 CDC42EP1Q00587 391 aa12.66□□□□□ -0.38
MSH6-214ENST00000616033 MRPL28Q13084 256 aaKnown RBP12.66□□□□□ -0.38
MSH6-214ENST00000616033 CHIT1Q13231 466 aa12.66□□□□□ -0.38
MSH6-214ENST00000616033 EFR3AQ14156 821 aa12.66□□□□□ -0.38
MSH6-214ENST00000616033 COX20Q5RI15 118 aa12.66□□□□□ -0.38
MSH6-214ENST00000616033 TRIQKQ629K1 86 aa12.66□□□□□ -0.38
MSH6-214ENST00000616033 ASB18Q6ZVZ8 466 aa12.66□□□□□ -0.38
MSH6-214ENST00000616033 OR6C4Q8NGE1 309 aa12.66□□□□□ -0.38
MSH6-214ENST00000616033 ASB12Q8WXK4 309 aa12.66□□□□□ -0.38
MSH6-214ENST00000616033 EID2BQ96D98 161 aa12.66□□□□□ -0.38
MSH6-214ENST00000616033 MCUBQ9NWR8 336 aa12.66□□□□□ -0.38
MSH6-214ENST00000616033 CD84Q9UIB8 345 aa12.66□□□□□ -0.38
MSH6-214ENST00000616033 TMPRSS11EQ9UL52 423 aa12.66□□□□□ -0.38
MSH6-214ENST00000616033 HSPE1-MOB4S4R3N1 261 aa12.66□□□□□ -0.38
MSH6-214ENST00000616033 ADAMDEC1O15204 470 aa12.66□□□□□ -0.38
MSH6-214ENST00000616033 ITGA2P17301 1181 aa12.66□□□□□ -0.38
MSH6-214ENST00000616033 DGKAP23743 735 aa12.66□□□□□ -0.38
MSH6-214ENST00000616033 HOXD9P28356 352 aaPredicted RBP12.66□□□□□ -0.38
MSH6-214ENST00000616033 DDOSTP39656 456 aa12.66□□□□□ -0.38
MSH6-214ENST00000616033 SMSP52788 366 aa12.66□□□□□ -0.38
MSH6-214ENST00000616033 GRM7Q14831 915 aa12.66□□□□□ -0.38
MSH6-214ENST00000616033 DUOXA1Q1HG43 343 aa12.66□□□□□ -0.38
MSH6-214ENST00000616033 ZNF284Q2VY69 593 aa12.66□□□□□ -0.38
MSH6-214ENST00000616033 C5orf22Q49AR2 442 aa12.66□□□□□ -0.38
MSH6-214ENST00000616033 IQCCQ4KMZ1 466 aa12.66□□□□□ -0.38
MSH6-214ENST00000616033 ARTNQ5T4W7 220 aa12.66□□□□□ -0.38
MSH6-214ENST00000616033 UBE2R2Q712K3 238 aaPredicted RBP12.66□□□□□ -0.38
MSH6-214ENST00000616033 ZBTB2Q8N680 514 aa12.66□□□□□ -0.38
MSH6-214ENST00000616033 NFKBIDQ8NI38 313 aa12.66□□□□□ -0.38
MSH6-214ENST00000616033 GRPEL2Q8TAA5 225 aa12.66□□□□□ -0.38
MSH6-214ENST00000616033 C1QTNF6Q9BXI9 259 aa12.66□□□□□ -0.38
MSH6-214ENST00000616033 C1QTNF3Q9BXJ4 246 aa12.66□□□□□ -0.38
MSH6-214ENST00000616033 AP5M1Q9H0R1 490 aa12.66□□□□□ -0.38
MSH6-214ENST00000616033 ANKHQ9HCJ1 492 aa12.66□□□□□ -0.38
MSH6-214ENST00000616033 CLEC4AQ9UMR7 237 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms