RNA–Protein interactions for RNA: ENST00000615606.4

CLTCL1-208, Transcript of clathrin heavy chain like 1, humanhuman

TSL 1 (best)

Gene CLTCL1, Length 4,994 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-208ENST00000615606 ISCA2Q86U28 154 aa9.09□□□□□ -0.95
CLTCL1-208ENST00000615606 LINC00471Q8N535 108 aa9.09□□□□□ -0.95
CLTCL1-208ENST00000615606 OR5K1Q8NHB7 308 aa9.09□□□□□ -0.95
CLTCL1-208ENST00000615606 MYLIPQ8WY64 445 aa9.09□□□□□ -0.95
CLTCL1-208ENST00000615606 ASB9Q96DX5 294 aa9.09□□□□□ -0.95
CLTCL1-208ENST00000615606 F2RL3Q96RI0 385 aa9.09□□□□□ -0.95
CLTCL1-208ENST00000615606 C6orf62Q9GZU0 229 aaPredicted RBP9.09□□□□□ -0.95
CLTCL1-208ENST00000615606 CLK4Q9HAZ1 481 aaKnown RBP9.09□□□□□ -0.95
CLTCL1-208ENST00000615606 ST6GALNAC1Q9NSC7 600 aaPredicted RBP9.09□□□□□ -0.95
CLTCL1-208ENST00000615606 GLOD5A6NK44 160 aa9.09□□□□□ -0.96
CLTCL1-208ENST00000615606 AURKAO14965 403 aa9.09□□□□□ -0.96
CLTCL1-208ENST00000615606 ENDOUP21128 410 aaKnown RBP9.09□□□□□ -0.96
CLTCL1-208ENST00000615606 AHCYP23526 432 aa9.09□□□□□ -0.96
CLTCL1-208ENST00000615606 OLR1P78380 273 aa9.09□□□□□ -0.96
CLTCL1-208ENST00000615606 DEFB133Q30KQ1 61 aa9.09□□□□□ -0.96
CLTCL1-208ENST00000615606 TRIQKQ629K1 86 aa9.09□□□□□ -0.96
CLTCL1-208ENST00000615606 CXXC5Q7LFL8 322 aaKnown RBP9.09□□□□□ -0.96
CLTCL1-208ENST00000615606 DENND6BQ8NEG7 585 aa9.09□□□□□ -0.96
CLTCL1-208ENST00000615606 OR5AR1Q8NGP9 310 aa9.09□□□□□ -0.96
CLTCL1-208ENST00000615606 L3HYPDHQ96EM0 354 aa9.09□□□□□ -0.96
CLTCL1-208ENST00000615606 DEFB126Q9BYW3 111 aa9.09□□□□□ -0.96
CLTCL1-208ENST00000615606 FANCFQ9NPI8 374 aa9.09□□□□□ -0.96
CLTCL1-208ENST00000615606 WDR45Q9Y484 360 aa9.09□□□□□ -0.96
CLTCL1-208ENST00000615606 TRBC2A0A5B9 178 aa9.08□□□□□ -0.96
CLTCL1-208ENST00000615606 FAM149AA5PLN7 773 aa9.08□□□□□ -0.96
CLTCL1-208ENST00000615606 CHST10O43529 356 aa9.08□□□□□ -0.96
CLTCL1-208ENST00000615606 ARHGEF15O94989 841 aa9.08□□□□□ -0.96
CLTCL1-208ENST00000615606 GSTM2P28161 218 aa9.08□□□□□ -0.96
CLTCL1-208ENST00000615606 GGT5P36269 586 aa9.08□□□□□ -0.96
CLTCL1-208ENST00000615606 SGSHP51688 502 aa9.08□□□□□ -0.96
CLTCL1-208ENST00000615606 POU6F2P78424 691 aaPredicted RBP9.08□□□□□ -0.96
CLTCL1-208ENST00000615606 RIPK1Q13546 671 aa9.08□□□□□ -0.96
CLTCL1-208ENST00000615606 PCBP2Q15366 365 aaKnown RBP eCLIP9.08□□□□□ -0.967e-13■■■■■ 53.1
CLTCL1-208ENST00000615606 PDZK1Q5T2W1 519 aa9.08□□□□□ -0.96
CLTCL1-208ENST00000615606 ISLR2Q6UXK2 745 aa9.08□□□□□ -0.96
CLTCL1-208ENST00000615606 PIANPQ8IYJ0 282 aa9.08□□□□□ -0.96
CLTCL1-208ENST00000615606 KBTBD8Q8NFY9 601 aa9.08□□□□□ -0.96
CLTCL1-208ENST00000615606 NFKBIDQ8NI38 313 aa9.08□□□□□ -0.96
CLTCL1-208ENST00000615606 GTPBP3Q969Y2 492 aaKnown RBP9.08□□□□□ -0.96
CLTCL1-208ENST00000615606 ARRDC3Q96B67 414 aa9.08□□□□□ -0.96
CLTCL1-208ENST00000615606 ZNF317Q96PQ6 595 aaPredicted RBP9.08□□□□□ -0.96
CLTCL1-208ENST00000615606 RBCK1Q9BYM8 510 aa9.08□□□□□ -0.96
CLTCL1-208ENST00000615606 MRPS26Q9BYN8 205 aaKnown RBP9.08□□□□□ -0.96
CLTCL1-208ENST00000615606 HDHD2Q9H0R4 259 aa9.08□□□□□ -0.96
CLTCL1-208ENST00000615606 TBC1D17Q9HA65 648 aa9.08□□□□□ -0.96
CLTCL1-208ENST00000615606 HCN2Q9UL51 889 aa9.08□□□□□ -0.96
CLTCL1-208ENST00000615606 PCDHGA12O60330 932 aa9.08□□□□□ -0.96
CLTCL1-208ENST00000615606 UGDHO60701 494 aa9.08□□□□□ -0.96
CLTCL1-208ENST00000615606 PLGP00747 810 aaPredicted RBP9.08□□□□□ -0.96
CLTCL1-208ENST00000615606 C1SP09871 688 aa9.08□□□□□ -0.96
CLTCL1-208ENST00000615606 ATXN1LP0C7T5 689 aaKnown RBP9.08□□□□□ -0.96
CLTCL1-208ENST00000615606 ALOX12P18054 663 aa9.08□□□□□ -0.96
CLTCL1-208ENST00000615606 OR4D2P58180 307 aa9.08□□□□□ -0.96
CLTCL1-208ENST00000615606 OR4C11Q6IEV9 310 aa9.08□□□□□ -0.96
CLTCL1-208ENST00000615606 GRHL2Q6ISB3 625 aa9.08□□□□□ -0.96
CLTCL1-208ENST00000615606 RPTNQ6XPR3 784 aa9.08□□□□□ -0.96
CLTCL1-208ENST00000615606 TTLL10Q6ZVT0 673 aa9.08□□□□□ -0.96
CLTCL1-208ENST00000615606 USP30Q70CQ3 517 aa9.08□□□□□ -0.96
CLTCL1-208ENST00000615606 SLC34A3Q8N130 599 aa9.08□□□□□ -0.96
CLTCL1-208ENST00000615606 HUS1BQ8NHY5 278 aa9.08□□□□□ -0.96
CLTCL1-208ENST00000615606 PHOSPHO1Q8TCT1 267 aa9.08□□□□□ -0.96
CLTCL1-208ENST00000615606 IFT27Q9BW83 186 aa9.08□□□□□ -0.96
CLTCL1-208ENST00000615606 FAM192AQ9GZU8 254 aa9.08□□□□□ -0.96
CLTCL1-208ENST00000615606 NUAK2Q9H093 628 aa9.08□□□□□ -0.96
CLTCL1-208ENST00000615606 RDH14Q9HBH5 336 aa9.08□□□□□ -0.96
CLTCL1-208ENST00000615606 FARSBQ9NSD9 589 aaKnown RBP9.08□□□□□ -0.96
CLTCL1-208ENST00000615606 ACTR10Q9NZ32 417 aa9.08□□□□□ -0.96
CLTCL1-208ENST00000615606 IRAK3Q9Y616 596 aa9.08□□□□□ -0.96
CLTCL1-208ENST00000615606 GOLGA4Q13439 2230 aaKnown RBP9.08□□□□□ -0.96
CLTCL1-208ENST00000615606 FEZF1A0PJY2 475 aa9.08□□□□□ -0.96
CLTCL1-208ENST00000615606 TPST2O60704 377 aa9.08□□□□□ -0.96
CLTCL1-208ENST00000615606 ZDHHC11BP0C7U3 371 aa9.08□□□□□ -0.96
CLTCL1-208ENST00000615606 PRLHRP49683 370 aa9.08□□□□□ -0.96
CLTCL1-208ENST00000615606 NR1H2P55055 460 aa9.08□□□□□ -0.96
CLTCL1-208ENST00000615606 TARDBPQ13148 414 aaKnown RBP eCLIP9.08□□□□□ -0.963e-6■■■■□ 20.1
CLTCL1-208ENST00000615606 ATP1A4Q13733 1029 aa9.08□□□□□ -0.96
CLTCL1-208ENST00000615606 SLC5A9Q2M3M2 681 aa9.08□□□□□ -0.96
CLTCL1-208ENST00000615606 SPANXN2Q5MJ10 180 aa9.08□□□□□ -0.96
CLTCL1-208ENST00000615606 ARMC4Q5T2S8 1044 aa9.08□□□□□ -0.96
CLTCL1-208ENST00000615606 LPCAT4Q643R3 524 aa9.08□□□□□ -0.96
CLTCL1-208ENST00000615606 LCTLQ6UWM7 567 aa9.08□□□□□ -0.96
CLTCL1-208ENST00000615606 P4HA3Q7Z4N8 544 aa9.08□□□□□ -0.96
CLTCL1-208ENST00000615606 CCDC116Q8IYX3 515 aa9.08□□□□□ -0.96
CLTCL1-208ENST00000615606 CBR4Q8N4T8 237 aa9.08□□□□□ -0.96
CLTCL1-208ENST00000615606 FAM47BQ8NA70 645 aa9.08□□□□□ -0.96
CLTCL1-208ENST00000615606 OR4K1Q8NGD4 311 aa9.08□□□□□ -0.96
CLTCL1-208ENST00000615606 OR9I1Q8NGQ6 314 aa9.08□□□□□ -0.96
CLTCL1-208ENST00000615606 LRTOMTQ8WZ04 291 aa9.08□□□□□ -0.96
CLTCL1-208ENST00000615606 G6PC3Q9BUM1 346 aa9.08□□□□□ -0.96
CLTCL1-208ENST00000615606 DENND2DQ9H6A0 471 aaPredicted RBP9.08□□□□□ -0.96
CLTCL1-208ENST00000615606 MEAF6Q9HAF1 191 aa9.08□□□□□ -0.96
CLTCL1-208ENST00000615606 SMURF2Q9HAU4 748 aa9.08□□□□□ -0.96
CLTCL1-208ENST00000615606 PCTPQ9UKL6 214 aa9.08□□□□□ -0.96
CLTCL1-208ENST00000615606 COL4A5P29400 1685 aa9.08□□□□□ -0.96
CLTCL1-208ENST00000615606 A0A0J9YY10 115 aa9.07□□□□□ -0.96
CLTCL1-208ENST00000615606 M0QX08 132 aa9.07□□□□□ -0.96
CLTCL1-208ENST00000615606 SDHDO14521 159 aa9.07□□□□□ -0.96
CLTCL1-208ENST00000615606 ARPC2O15144 300 aa9.07□□□□□ -0.96
CLTCL1-208ENST00000615606 EMC8O43402 210 aa9.07□□□□□ -0.96
CLTCL1-208ENST00000615606 NUAK1O60285 661 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms