RNA–Protein interactions for RNA: ENST00000615335.4

FOXN3-219, Transcript of forkhead box N3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene FOXN3, Length 2,421 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-219ENST00000615335 ALDH3A2P51648 485 aa12.59□□□□□ -0.39
FOXN3-219ENST00000615335 MAPK12P53778 367 aa12.59□□□□□ -0.39
FOXN3-219ENST00000615335 YBX1P67809 324 aaKnown RBP12.59□□□□□ -0.39
FOXN3-219ENST00000615335 PTSQ03393 145 aa12.59□□□□□ -0.39
FOXN3-219ENST00000615335 CNTN1Q12860 1018 aa12.59□□□□□ -0.39
FOXN3-219ENST00000615335 COX10Q12887 443 aa12.59□□□□□ -0.39
FOXN3-219ENST00000615335 TRAF3Q13114 568 aa12.59□□□□□ -0.39
FOXN3-219ENST00000615335 BAMBIQ13145 260 aa12.59□□□□□ -0.39
FOXN3-219ENST00000615335 CYP51A1Q16850 503 aa12.59□□□□□ -0.39
FOXN3-219ENST00000615335 FBXO48Q5FWF7 155 aa12.59□□□□□ -0.39
FOXN3-219ENST00000615335 EFL1Q7Z2Z2 1120 aaKnown RBP12.59□□□□□ -0.39
FOXN3-219ENST00000615335 ZNF687Q8N1G0 1237 aa12.59□□□□□ -0.39
FOXN3-219ENST00000615335 SYNPOQ8N3V7 929 aa12.59□□□□□ -0.39
FOXN3-219ENST00000615335 HDDC3Q8N4P3 179 aa12.59□□□□□ -0.39
FOXN3-219ENST00000615335 AADATQ8N5Z0 425 aa12.59□□□□□ -0.39
FOXN3-219ENST00000615335 DNAJB14Q8TBM8 379 aa12.59□□□□□ -0.39
FOXN3-219ENST00000615335 GANCQ8TET4 914 aa12.59□□□□□ -0.39
FOXN3-219ENST00000615335 NECAB3Q96P71 396 aaPredicted RBP12.59□□□□□ -0.39
FOXN3-219ENST00000615335 TRIM8Q9BZR9 551 aa12.59□□□□□ -0.39
FOXN3-219ENST00000615335 SOX17Q9H6I2 414 aaPredicted RBP12.59□□□□□ -0.39
FOXN3-219ENST00000615335 ERVMER34-1Q9H9K5 563 aa12.59□□□□□ -0.39
FOXN3-219ENST00000615335 IL17CQ9P0M4 197 aa12.59□□□□□ -0.39
FOXN3-219ENST00000615335 CCDC154A6NI56 674 aa12.58□□□□□ -0.4
FOXN3-219ENST00000615335 TOR1AO14656 332 aa12.58□□□□□ -0.4
FOXN3-219ENST00000615335 INPP4BO15327 924 aa12.58□□□□□ -0.4
FOXN3-219ENST00000615335 NDUFS3O75489 264 aa12.58□□□□□ -0.4
FOXN3-219ENST00000615335 RPS17P08708 135 aaKnown RBP12.58□□□□□ -0.4
FOXN3-219ENST00000615335 THRBP10828 461 aa12.58□□□□□ -0.4
FOXN3-219ENST00000615335 DRD3P35462 400 aa12.58□□□□□ -0.4
FOXN3-219ENST00000615335 GSK3BP49841 420 aa12.58□□□□□ -0.4
FOXN3-219ENST00000615335 S100A12P80511 92 aa12.58□□□□□ -0.4
FOXN3-219ENST00000615335 FADDQ13158 208 aa12.58□□□□□ -0.4
FOXN3-219ENST00000615335 NFE2L1Q14494 772 aa12.58□□□□□ -0.4
FOXN3-219ENST00000615335 TSNQ15631 228 aaKnown RBP12.58□□□□□ -0.4
FOXN3-219ENST00000615335 SPATC1Q76KD6 591 aa12.58□□□□□ -0.4
FOXN3-219ENST00000615335 IFNEQ86WN2 208 aa12.58□□□□□ -0.4
FOXN3-219ENST00000615335 CHDHQ8NE62 594 aaPredicted RBP12.58□□□□□ -0.4
FOXN3-219ENST00000615335 FAR1Q8WVX9 515 aa12.58□□□□□ -0.4
FOXN3-219ENST00000615335 TMCO6Q96DC7 493 aa12.58□□□□□ -0.4
FOXN3-219ENST00000615335 ZHX1-C8orf76Q96EF9 292 aa12.58□□□□□ -0.4
FOXN3-219ENST00000615335 NUSAP1Q9BXS6 441 aaKnown RBP12.58□□□□□ -0.4
FOXN3-219ENST00000615335 HDAC8Q9BY41 377 aa12.58□□□□□ -0.4
FOXN3-219ENST00000615335 ALOXE3Q9BYJ1 711 aa12.58□□□□□ -0.4
FOXN3-219ENST00000615335 ALG2Q9H553 416 aa12.58□□□□□ -0.4
FOXN3-219ENST00000615335 TBC1D17Q9HA65 648 aa12.58□□□□□ -0.4
FOXN3-219ENST00000615335 AIG1Q9NVV5 245 aa12.58□□□□□ -0.4
FOXN3-219ENST00000615335 FKBPLQ9UIM3 349 aa12.58□□□□□ -0.4
FOXN3-219ENST00000615335 IKZF3Q9UKT9 509 aa12.58□□□□□ -0.4
FOXN3-219ENST00000615335 A0A1W2PP55 124 aa12.58□□□□□ -0.4
FOXN3-219ENST00000615335 TCRBV21S2A2A0A5A6 115 aa12.58□□□□□ -0.4
FOXN3-219ENST00000615335 LOC110117498-PIK3R3F6TDL0 507 aa12.58□□□□□ -0.4
FOXN3-219ENST00000615335 CDC7O00311 574 aa12.58□□□□□ -0.4
FOXN3-219ENST00000615335 DFNA5O60443 496 aa12.58□□□□□ -0.4
FOXN3-219ENST00000615335 CPNE3O75131 537 aaKnown RBP12.58□□□□□ -0.4
FOXN3-219ENST00000615335 PRR35P0CG20 571 aa12.58□□□□□ -0.4
FOXN3-219ENST00000615335 MTHFD1P11586 935 aaKnown RBP12.58□□□□□ -0.4
FOXN3-219ENST00000615335 ZNF30P17039 623 aa12.58□□□□□ -0.4
FOXN3-219ENST00000615335 ACVR2AP27037 513 aa12.58□□□□□ -0.4
FOXN3-219ENST00000615335 KRT20P35900 424 aa12.58□□□□□ -0.4
FOXN3-219ENST00000615335 BLVRAP53004 296 aa12.58□□□□□ -0.4
FOXN3-219ENST00000615335 OLR1P78380 273 aa12.58□□□□□ -0.4
FOXN3-219ENST00000615335 LIPEQ05469 1076 aa12.58□□□□□ -0.4
FOXN3-219ENST00000615335 ZNF33BQ06732 778 aa12.58□□□□□ -0.4
FOXN3-219ENST00000615335 ELP6Q0PNE2 266 aa12.58□□□□□ -0.4
FOXN3-219ENST00000615335 GRIK2Q13002 908 aa12.58□□□□□ -0.4
FOXN3-219ENST00000615335 SETMARQ53H47 684 aaPredicted RBP12.58□□□□□ -0.4
FOXN3-219ENST00000615335 RABL3Q5HYI8 236 aa12.58□□□□□ -0.4
FOXN3-219ENST00000615335 AFTPHQ6ULP2 937 aa12.58□□□□□ -0.4
FOXN3-219ENST00000615335 DPPA4Q7L190 304 aa12.58□□□□□ -0.4
FOXN3-219ENST00000615335 LGALS12Q96DT0 336 aa12.58□□□□□ -0.4
FOXN3-219ENST00000615335 SIPA1Q96FS4 1042 aa12.58□□□□□ -0.4
FOXN3-219ENST00000615335 WRAP53Q9BUR4 548 aaKnown RBP12.58□□□□□ -0.4
FOXN3-219ENST00000615335 TRAF4Q9BUZ4 470 aaPredicted RBP12.58□□□□□ -0.4
FOXN3-219ENST00000615335 NUAK2Q9H093 628 aa12.58□□□□□ -0.4
FOXN3-219ENST00000615335 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP12.58□□□□□ -0.44e-7■■■■■ 36.2
FOXN3-219ENST00000615335 OPTCQ9UBM4 332 aa12.58□□□□□ -0.4
FOXN3-219ENST00000615335 LINC00862A6NCI5 91 aa12.57□□□□□ -0.4
FOXN3-219ENST00000615335 NPEPPSL1A6NEC2 478 aa12.57□□□□□ -0.4
FOXN3-219ENST00000615335 METTL15A6NJ78 407 aa12.57□□□□□ -0.4
FOXN3-219ENST00000615335 STX16O14662 325 aa12.57□□□□□ -0.4
FOXN3-219ENST00000615335 ELFN1P0C7U0 828 aa12.57□□□□□ -0.4
FOXN3-219ENST00000615335 ACADMP11310 421 aa12.57□□□□□ -0.4
FOXN3-219ENST00000615335 MMP12P39900 470 aa12.57□□□□□ -0.4
FOXN3-219ENST00000615335 MRPL19P49406 292 aaKnown RBP12.57□□□□□ -0.4
FOXN3-219ENST00000615335 FZD5Q13467 585 aa12.57□□□□□ -0.4
FOXN3-219ENST00000615335 RCAN2Q14206 197 aa12.57□□□□□ -0.4
FOXN3-219ENST00000615335 GPAT3Q53EU6 434 aa12.57□□□□□ -0.4
FOXN3-219ENST00000615335 PIP5KL1Q5T9C9 394 aa12.57□□□□□ -0.4
FOXN3-219ENST00000615335 SYVN1Q86TM6 617 aa12.57□□□□□ -0.4
FOXN3-219ENST00000615335 AMIGO1Q86WK6 493 aa12.57□□□□□ -0.4
FOXN3-219ENST00000615335 SYTL1Q8IYJ3 562 aa12.57□□□□□ -0.4
FOXN3-219ENST00000615335 NKAPQ8N5F7 415 aaKnown RBP12.57□□□□□ -0.4
FOXN3-219ENST00000615335 PARP16Q8N5Y8 322 aa12.57□□□□□ -0.4
FOXN3-219ENST00000615335 TP53I13Q8NBR0 393 aaPredicted RBP12.57□□□□□ -0.4
FOXN3-219ENST00000615335 ZNF555Q8NEP9 628 aa12.57□□□□□ -0.4
FOXN3-219ENST00000615335 FUBP1Q96AE4 644 aaKnown RBP12.57□□□□□ -0.4
FOXN3-219ENST00000615335 RAB7BQ96AH8 199 aa12.57□□□□□ -0.4
FOXN3-219ENST00000615335 MRGPRX1Q96LB2 322 aa12.57□□□□□ -0.4
FOXN3-219ENST00000615335 GPR21Q99679 349 aa12.57□□□□□ -0.4
FOXN3-219ENST00000615335 CCDC32Q9BV29 185 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms