RNA–Protein interactions for RNA: ENST00000613744.4

POLR2J3-220, Transcript of RNA polymerase II subunit J3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene POLR2J3, Length 2,096 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-220ENST00000613744 PDGFRLQ15198 375 aa21.11■□□□□ 0.97
POLR2J3-220ENST00000613744 TTLL9Q3SXZ7 439 aa21.11■□□□□ 0.97
POLR2J3-220ENST00000613744 FAM174BQ3ZCQ3 159 aa21.11■□□□□ 0.97
POLR2J3-220ENST00000613744 SETMARQ53H47 684 aaPredicted RBP21.11■□□□□ 0.97
POLR2J3-220ENST00000613744 INO80DQ53TQ3 878 aaPredicted RBP21.11■□□□□ 0.97
POLR2J3-220ENST00000613744 C12orf40Q86WS4 652 aa21.11■□□□□ 0.97
POLR2J3-220ENST00000613744 Q96MT0 163 aa21.11■□□□□ 0.97
POLR2J3-220ENST00000613744 KCNH6Q9H252 994 aa21.11■□□□□ 0.97
POLR2J3-220ENST00000613744 CLMPQ9H6B4 373 aa21.11■□□□□ 0.97
POLR2J3-220ENST00000613744 SMURF1Q9HCE7 757 aa21.11■□□□□ 0.97
POLR2J3-220ENST00000613744 TOR4AQ9NXH8 423 aa21.11■□□□□ 0.97
POLR2J3-220ENST00000613744 SNX7Q9UNH6 387 aa21.11■□□□□ 0.97
POLR2J3-220ENST00000613744 SPEF1Q9Y4P9 236 aa21.11■□□□□ 0.97
POLR2J3-220ENST00000613744 TNPO3Q9Y5L0 923 aaKnown RBP21.11■□□□□ 0.97
POLR2J3-220ENST00000613744 A0A0G2JMP0 313 aa21.11■□□□□ 0.97
POLR2J3-220ENST00000613744 NPEPPSL1A6NEC2 478 aa21.11■□□□□ 0.97
POLR2J3-220ENST00000613744 BTN3A1O00481 513 aa21.11■□□□□ 0.97
POLR2J3-220ENST00000613744 CCL22O00626 93 aa21.11■□□□□ 0.97
POLR2J3-220ENST00000613744 CAPN1P07384 714 aa21.11■□□□□ 0.97
POLR2J3-220ENST00000613744 RHOCP08134 193 aa21.11■□□□□ 0.97
POLR2J3-220ENST00000613744 IL12RB1P42701 662 aa21.11■□□□□ 0.97
POLR2J3-220ENST00000613744 TNK1Q13470 666 aa21.11■□□□□ 0.97
POLR2J3-220ENST00000613744 CDH18Q13634 790 aa21.11■□□□□ 0.97
POLR2J3-220ENST00000613744 LETMD1Q6P1Q0 360 aa21.11■□□□□ 0.97
POLR2J3-220ENST00000613744 ZSWIM9Q86XI8 627 aa21.11■□□□□ 0.97
POLR2J3-220ENST00000613744 GPSM1Q86YR5 675 aa21.11■□□□□ 0.97
POLR2J3-220ENST00000613744 GRAMD2AQ8IUY3 354 aa21.11■□□□□ 0.97
POLR2J3-220ENST00000613744 RDH10Q8IZV5 341 aa21.11■□□□□ 0.97
POLR2J3-220ENST00000613744 CENPOQ9BU64 300 aa21.11■□□□□ 0.97
POLR2J3-220ENST00000613744 SPON2Q9BUD6 331 aa21.11■□□□□ 0.97
POLR2J3-220ENST00000613744 ZNF717Q9BY31 904 aaPredicted RBP21.11■□□□□ 0.97
POLR2J3-220ENST00000613744 NT5MQ9NPB1 228 aa21.11■□□□□ 0.97
POLR2J3-220ENST00000613744 ERVK13-1Q9NX77 482 aa21.11■□□□□ 0.97
POLR2J3-220ENST00000613744 NUDT4Q9NZJ9 180 aa21.11■□□□□ 0.97
POLR2J3-220ENST00000613744 EIF2B4Q9UI10 523 aaKnown RBP21.11■□□□□ 0.97
POLR2J3-220ENST00000613744 RPS6KA6Q9UK32 745 aa21.11■□□□□ 0.97
POLR2J3-220ENST00000613744 PCDHGA6Q9Y5G7 932 aa21.11■□□□□ 0.97
POLR2J3-220ENST00000613744 A0A0U1RQS6 177 aa21.1■□□□□ 0.97
POLR2J3-220ENST00000613744 ADH1CP00326 375 aa21.1■□□□□ 0.97
POLR2J3-220ENST00000613744 FABP3P05413 133 aa21.1■□□□□ 0.97
POLR2J3-220ENST00000613744 ADORA3P0DMS8 318 aa21.1■□□□□ 0.97
POLR2J3-220ENST00000613744 HLA-DPA1P20036 260 aa21.1■□□□□ 0.97
POLR2J3-220ENST00000613744 GNPDA1P46926 289 aa21.1■□□□□ 0.97
POLR2J3-220ENST00000613744 CAMK2GQ13555 558 aaPredicted RBP21.1■□□□□ 0.97
POLR2J3-220ENST00000613744 PCBP2Q15366 365 aaKnown RBP eCLIP21.1■□□□□ 0.97
POLR2J3-220ENST00000613744 RFTN2Q52LD8 501 aaPredicted RBP21.1■□□□□ 0.97
POLR2J3-220ENST00000613744 ESCO2Q56NI9 601 aa21.1■□□□□ 0.97
POLR2J3-220ENST00000613744 IER5LQ5T953 404 aa21.1■□□□□ 0.97
POLR2J3-220ENST00000613744 CHST9Q7L1S5 443 aa21.1■□□□□ 0.97
POLR2J3-220ENST00000613744 CYP4Z2PQ8N1L4 340 aa21.1■□□□□ 0.97
POLR2J3-220ENST00000613744 TMEM132CQ8N3T6 1108 aa21.1■□□□□ 0.97
POLR2J3-220ENST00000613744 ATG16L2Q8NAA4 619 aa21.1■□□□□ 0.97
POLR2J3-220ENST00000613744 OR7D4Q8NG98 312 aa21.1■□□□□ 0.97
POLR2J3-220ENST00000613744 OR5H6Q8NGV6 325 aa21.1■□□□□ 0.97
POLR2J3-220ENST00000613744 CHTF18Q8WVB6 975 aa21.1■□□□□ 0.97
POLR2J3-220ENST00000613744 ABCG2Q9UNQ0 655 aa21.1■□□□□ 0.97
POLR2J3-220ENST00000613744 MED16Q9Y2X0 877 aa21.1■□□□□ 0.97
POLR2J3-220ENST00000613744 A0A0C4DFX4 3053 aa21.1■□□□□ 0.97
POLR2J3-220ENST00000613744 J3KR12 359 aa21.09■□□□□ 0.97
POLR2J3-220ENST00000613744 RGS14O43566 566 aa21.09■□□□□ 0.97
POLR2J3-220ENST00000613744 FGF1P05230 155 aa21.09■□□□□ 0.97
POLR2J3-220ENST00000613744 PCSK2P16519 638 aa21.09■□□□□ 0.97
POLR2J3-220ENST00000613744 GGT2P36268 569 aa21.09■□□□□ 0.97
POLR2J3-220ENST00000613744 SLC6A11P48066 632 aa21.09■□□□□ 0.97
POLR2J3-220ENST00000613744 HTR6P50406 440 aa21.09■□□□□ 0.97
POLR2J3-220ENST00000613744 PLIN5Q00G26 463 aa21.09■□□□□ 0.97
POLR2J3-220ENST00000613744 SCN1BQ07699 218 aa21.09■□□□□ 0.97
POLR2J3-220ENST00000613744 MARC1Q5VT66 337 aa21.09■□□□□ 0.97
POLR2J3-220ENST00000613744 CACHD1Q5VU97 1274 aa21.09■□□□□ 0.97
POLR2J3-220ENST00000613744 FAAH2Q6GMR7 532 aa21.09■□□□□ 0.97
POLR2J3-220ENST00000613744 ASTLQ6HA08 431 aaPredicted RBP21.09■□□□□ 0.97
POLR2J3-220ENST00000613744 VWA5B2Q8N398 1253 aa21.09■□□□□ 0.97
POLR2J3-220ENST00000613744 SDR16C5Q8N3Y7 309 aa21.09■□□□□ 0.97
POLR2J3-220ENST00000613744 GGHQ92820 318 aa21.09■□□□□ 0.97
POLR2J3-220ENST00000613744 TRNT1Q96Q11 434 aaKnown RBP21.09■□□□□ 0.97
POLR2J3-220ENST00000613744 CHCHD6Q9BRQ6 235 aa21.09■□□□□ 0.97
POLR2J3-220ENST00000613744 TMEM245Q9H330 911 aa21.09■□□□□ 0.97
POLR2J3-220ENST00000613744 SP110Q9HB58 689 aa21.09■□□□□ 0.97
POLR2J3-220ENST00000613744 CD274Q9NZQ7 290 aa21.09■□□□□ 0.97
POLR2J3-220ENST00000613744 VPS9D1Q9Y2B5 631 aa21.09■□□□□ 0.97
POLR2J3-220ENST00000613744 CCL27Q9Y4X3 112 aa21.09■□□□□ 0.97
POLR2J3-220ENST00000613744 KCTD3Q9Y597 815 aa21.09■□□□□ 0.97
POLR2J3-220ENST00000613744 A8MV72 311 aaPredicted RBP21.09■□□□□ 0.97
POLR2J3-220ENST00000613744 MYO1GB0I1T2 1018 aa21.09■□□□□ 0.97
POLR2J3-220ENST00000613744 SLC28A1O00337 649 aa21.09■□□□□ 0.97
POLR2J3-220ENST00000613744 CTDSP2O14595 271 aa21.09■□□□□ 0.97
POLR2J3-220ENST00000613744 KIAA0513O60268 411 aa21.09■□□□□ 0.97
POLR2J3-220ENST00000613744 C21orf33P30042 268 aaPredicted RBP21.09■□□□□ 0.97
POLR2J3-220ENST00000613744 SLC19A1P41440 591 aa21.09■□□□□ 0.97
POLR2J3-220ENST00000613744 ITGA1P56199 1179 aa21.09■□□□□ 0.97
POLR2J3-220ENST00000613744 MESP2Q0VG99 397 aa21.09■□□□□ 0.97
POLR2J3-220ENST00000613744 FAPQ12884 760 aa21.09■□□□□ 0.97
POLR2J3-220ENST00000613744 RNF219Q5W0B1 726 aaPredicted RBP21.09■□□□□ 0.97
POLR2J3-220ENST00000613744 CXorf57Q6NSI4 855 aaKnown RBP21.09■□□□□ 0.97
POLR2J3-220ENST00000613744 CREB3L2Q70SY1 520 aa21.09■□□□□ 0.97
POLR2J3-220ENST00000613744 CPA6Q8N4T0 437 aa21.09■□□□□ 0.97
POLR2J3-220ENST00000613744 TEX26Q8N6G2 289 aa21.09■□□□□ 0.97
POLR2J3-220ENST00000613744 FAM181AQ8N9Y4 354 aa21.09■□□□□ 0.97
POLR2J3-220ENST00000613744 ROGDIQ9GZN7 287 aa21.09■□□□□ 0.97
POLR2J3-220ENST00000613744 REEP1Q9H902 201 aa21.09■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms