RNA–Protein interactions for RNA: ENST00000612927.1

PCDHGA4-202, Transcript of protocadherin gamma subfamily A, 4, humanhuman

APPRIS ALT2 BASIC

Gene PCDHGA4, Length 2,691 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA4-202ENST00000612927 MICU2Q8IYU8 434 aa12.16□□□□□ -0.46
PCDHGA4-202ENST00000612927 CELF5Q8N6W0 485 aaKnown RBP12.16□□□□□ -0.46
PCDHGA4-202ENST00000612927 ELMO1Q92556 727 aa12.16□□□□□ -0.46
PCDHGA4-202ENST00000612927 ZFYVE19Q96K21 471 aa12.16□□□□□ -0.46
PCDHGA4-202ENST00000612927 HIST1H2AHQ96KK5 128 aa12.16□□□□□ -0.46
PCDHGA4-202ENST00000612927 HIST1H2AJQ99878 128 aa12.16□□□□□ -0.46
PCDHGA4-202ENST00000612927 APOL4Q9BPW4 351 aa12.16□□□□□ -0.46
PCDHGA4-202ENST00000612927 H2AFJQ9BTM1 129 aa12.16□□□□□ -0.46
PCDHGA4-202ENST00000612927 EBPLQ9BY08 206 aa12.16□□□□□ -0.46
PCDHGA4-202ENST00000612927 GABARAPL1Q9H0R8 117 aa12.16□□□□□ -0.46
PCDHGA4-202ENST00000612927 ZBTB20Q9HC78 741 aaPredicted RBP12.16□□□□□ -0.46
PCDHGA4-202ENST00000612927 SERHLQ9NQF3 203 aa12.16□□□□□ -0.46
PCDHGA4-202ENST00000612927 ASIC5Q9NY37 505 aa12.16□□□□□ -0.46
PCDHGA4-202ENST00000612927 PLXNA2O75051 1894 aa12.16□□□□□ -0.46
PCDHGA4-202ENST00000612927 TRBV5-3A0A0A0MS03 114 aa12.16□□□□□ -0.46
PCDHGA4-202ENST00000612927 LOC110117498-PIK3R3F6TDL0 507 aa12.16□□□□□ -0.46
PCDHGA4-202ENST00000612927 CXCR6O00574 342 aa12.16□□□□□ -0.46
PCDHGA4-202ENST00000612927 ICMTO60725 284 aa12.16□□□□□ -0.46
PCDHGA4-202ENST00000612927 C8GP07360 202 aa12.16□□□□□ -0.46
PCDHGA4-202ENST00000612927 TGFBR1P36897 503 aa12.16□□□□□ -0.46
PCDHGA4-202ENST00000612927 METAP1P53582 386 aa12.16□□□□□ -0.46
PCDHGA4-202ENST00000612927 GALK2Q01415 458 aa12.16□□□□□ -0.46
PCDHGA4-202ENST00000612927 SLC14A1Q13336 389 aa12.16□□□□□ -0.46
PCDHGA4-202ENST00000612927 DUSP7Q16829 419 aa12.16□□□□□ -0.46
PCDHGA4-202ENST00000612927 FAM109BQ6ICB4 259 aaPredicted RBP12.16□□□□□ -0.46
PCDHGA4-202ENST00000612927 RNF165Q6ZSG1 346 aa12.16□□□□□ -0.46
PCDHGA4-202ENST00000612927 DPPA4Q7L190 304 aa12.16□□□□□ -0.46
PCDHGA4-202ENST00000612927 PARS2Q7L3T8 475 aaKnown RBP12.16□□□□□ -0.46
PCDHGA4-202ENST00000612927 LILRA3Q8N6C8 439 aaPredicted RBP12.16□□□□□ -0.46
PCDHGA4-202ENST00000612927 KBTBD8Q8NFY9 601 aa12.16□□□□□ -0.46
PCDHGA4-202ENST00000612927 SMG7Q92540 1137 aaKnown RBP12.16□□□□□ -0.46
PCDHGA4-202ENST00000612927 PIK3R3Q92569 461 aa12.16□□□□□ -0.46
PCDHGA4-202ENST00000612927 NXPE3Q969Y0 559 aa12.16□□□□□ -0.46
PCDHGA4-202ENST00000612927 CCDC32Q9BV29 185 aa12.16□□□□□ -0.46
PCDHGA4-202ENST00000612927 GPRC5BQ9NZH0 403 aa12.16□□□□□ -0.46
PCDHGA4-202ENST00000612927 FAM20BO75063 409 aa12.15□□□□□ -0.46
PCDHGA4-202ENST00000612927 RETP07949 1114 aa12.15□□□□□ -0.46
PCDHGA4-202ENST00000612927 MPC1LP0DKB6 136 aa12.15□□□□□ -0.46
PCDHGA4-202ENST00000612927 IL1RNP18510 177 aa12.15□□□□□ -0.46
PCDHGA4-202ENST00000612927 EFNA1P20827 205 aaPredicted RBP12.15□□□□□ -0.46
PCDHGA4-202ENST00000612927 XPAP23025 273 aaPredicted RBP12.15□□□□□ -0.46
PCDHGA4-202ENST00000612927 RRM2P31350 389 aa12.15□□□□□ -0.46
PCDHGA4-202ENST00000612927 SMU1Q2TAY7 513 aa12.15□□□□□ -0.46
PCDHGA4-202ENST00000612927 PLEKHS1Q5SXH7 462 aa12.15□□□□□ -0.46
PCDHGA4-202ENST00000612927 METTL2BQ6P1Q9 378 aaKnown RBP12.15□□□□□ -0.46
PCDHGA4-202ENST00000612927 TMEM179BQ7Z7N9 219 aa12.15□□□□□ -0.46
PCDHGA4-202ENST00000612927 TRAM1L1Q8N609 369 aa12.15□□□□□ -0.46
PCDHGA4-202ENST00000612927 SETD6Q8TBK2 473 aa12.15□□□□□ -0.46
PCDHGA4-202ENST00000612927 ST6GAL2Q96JF0 529 aa12.15□□□□□ -0.46
PCDHGA4-202ENST00000612927 SIGLEC11Q96RL6 698 aa12.15□□□□□ -0.46
PCDHGA4-202ENST00000612927 NUAK2Q9H093 628 aa12.15□□□□□ -0.46
PCDHGA4-202ENST00000612927 ADPRHL2Q9NX46 363 aa12.15□□□□□ -0.46
PCDHGA4-202ENST00000612927 SNX6Q9UNH7 406 aa12.15□□□□□ -0.46
PCDHGA4-202ENST00000612927 CCRL2O00421 344 aa12.15□□□□□ -0.46
PCDHGA4-202ENST00000612927 CAPN5O15484 640 aaPredicted RBP12.15□□□□□ -0.46
PCDHGA4-202ENST00000612927 SRPRAP08240 638 aaKnown RBP12.15□□□□□ -0.46
PCDHGA4-202ENST00000612927 M6PRP20645 277 aa12.15□□□□□ -0.46
PCDHGA4-202ENST00000612927 PRKACGP22612 351 aa12.15□□□□□ -0.46
PCDHGA4-202ENST00000612927 S100A3P33764 101 aa12.15□□□□□ -0.46
PCDHGA4-202ENST00000612927 MMP12P39900 470 aa12.15□□□□□ -0.46
PCDHGA4-202ENST00000612927 SLC6A11P48066 632 aa12.15□□□□□ -0.46
PCDHGA4-202ENST00000612927 RACK1P63244 317 aaKnown RBP12.15□□□□□ -0.46
PCDHGA4-202ENST00000612927 CHIT1Q13231 466 aa12.15□□□□□ -0.46
PCDHGA4-202ENST00000612927 DDX39BQ13838 428 aaKnown RBP12.15□□□□□ -0.46
PCDHGA4-202ENST00000612927 STARD3Q14849 445 aa12.15□□□□□ -0.46
PCDHGA4-202ENST00000612927 GRIN2CQ14957 1233 aa12.15□□□□□ -0.46
PCDHGA4-202ENST00000612927 SF1Q15637 639 aaKnown RBP12.15□□□□□ -0.46
PCDHGA4-202ENST00000612927 SHQ1Q6PI26 577 aaKnown RBP12.15□□□□□ -0.46
PCDHGA4-202ENST00000612927 TECPR1Q7Z6L1 1165 aa12.15□□□□□ -0.46
PCDHGA4-202ENST00000612927 TBC1D20Q96BZ9 403 aa12.15□□□□□ -0.46
PCDHGA4-202ENST00000612927 CPPED1Q9BRF8 314 aaPredicted RBP12.15□□□□□ -0.46
PCDHGA4-202ENST00000612927 REXO4Q9GZR2 422 aaKnown RBP12.15□□□□□ -0.46
PCDHGA4-202ENST00000612927 EHD3Q9NZN3 535 aa12.15□□□□□ -0.46
PCDHGA4-202ENST00000612927 AP3M1Q9Y2T2 418 aa12.15□□□□□ -0.46
PCDHGA4-202ENST00000612927 PRRT4C9JH25 899 aa12.14□□□□□ -0.47
PCDHGA4-202ENST00000612927 SH3BGRLO75368 114 aa12.14□□□□□ -0.47
PCDHGA4-202ENST00000612927 CA3P07451 260 aa12.14□□□□□ -0.47
PCDHGA4-202ENST00000612927 CD22P20273 847 aa12.14□□□□□ -0.47
PCDHGA4-202ENST00000612927 PTPN6P29350 595 aa12.14□□□□□ -0.47
PCDHGA4-202ENST00000612927 CTSKP43235 329 aa12.14□□□□□ -0.47
PCDHGA4-202ENST00000612927 PREPP48147 710 aa12.14□□□□□ -0.47
PCDHGA4-202ENST00000612927 CLDN8P56748 225 aa12.14□□□□□ -0.47
PCDHGA4-202ENST00000612927 CSNK2BP67870 215 aa12.14□□□□□ -0.47
PCDHGA4-202ENST00000612927 CCSMST1Q4G0I0 132 aa12.14□□□□□ -0.47
PCDHGA4-202ENST00000612927 CDKL4Q5MAI5 379 aa12.14□□□□□ -0.47
PCDHGA4-202ENST00000612927 OR4F3Q6IEY1 312 aa12.14□□□□□ -0.47
PCDHGA4-202ENST00000612927 VN1R5Q7Z5H4 357 aa12.14□□□□□ -0.47
PCDHGA4-202ENST00000612927 CDC26Q8NHZ8 85 aa12.14□□□□□ -0.47
PCDHGA4-202ENST00000612927 NETO1Q8TDF5 533 aa12.14□□□□□ -0.47
PCDHGA4-202ENST00000612927 JPH3Q8WXH2 748 aaPredicted RBP12.14□□□□□ -0.47
PCDHGA4-202ENST00000612927 GDF15Q99988 308 aa12.14□□□□□ -0.47
PCDHGA4-202ENST00000612927 CDADC1Q9BWV3 514 aa12.14□□□□□ -0.47
PCDHGA4-202ENST00000612927 DNAJC11Q9NVH1 559 aa12.14□□□□□ -0.47
PCDHGA4-202ENST00000612927 NFKBIL1Q9UBC1 381 aaPredicted RBP12.14□□□□□ -0.47
PCDHGA4-202ENST00000612927 RNF6Q9Y252 685 aa12.14□□□□□ -0.47
PCDHGA4-202ENST00000612927 OTOL1A6NHN0 477 aaPredicted RBP12.14□□□□□ -0.47
PCDHGA4-202ENST00000612927 GFYI3L273 518 aa12.14□□□□□ -0.47
PCDHGA4-202ENST00000612927 KPNA3O00505 521 aaPredicted RBP12.14□□□□□ -0.47
PCDHGA4-202ENST00000612927 MTRF1O75570 445 aaKnown RBP12.14□□□□□ -0.47
PCDHGA4-202ENST00000612927 ADH1CP00326 375 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms