RNA–Protein interactions for RNA: ENST00000609587.1

SMCHD1-213, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

Gene SMCHD1, Length 460 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-213ENST00000609587 SNX32Q86XE0 403 aa3.68□□□□□ -1.82
SMCHD1-213ENST00000609587 LMNTD2Q8IXW0 634 aa3.68□□□□□ -1.82
SMCHD1-213ENST00000609587 ZC3H3Q8IXZ2 948 aaKnown RBP3.68□□□□□ -1.82
SMCHD1-213ENST00000609587 CHCHD4Q8N4Q1 142 aa3.68□□□□□ -1.82
SMCHD1-213ENST00000609587 CCDC185Q8N715 623 aa3.68□□□□□ -1.82
SMCHD1-213ENST00000609587 ZNF614Q8N883 585 aa3.68□□□□□ -1.82
SMCHD1-213ENST00000609587 CASP10Q92851 521 aa3.68□□□□□ -1.82
SMCHD1-213ENST00000609587 SLCO2A1Q92959 643 aa3.68□□□□□ -1.82
SMCHD1-213ENST00000609587 FAM218AQ96MZ4 157 aa3.68□□□□□ -1.82
SMCHD1-213ENST00000609587 SLC5A7Q9GZV3 580 aa3.68□□□□□ -1.82
SMCHD1-213ENST00000609587 HOXD1Q9GZZ0 328 aa3.68□□□□□ -1.82
SMCHD1-213ENST00000609587 RNPEPL1Q9HAU8 725 aa3.68□□□□□ -1.82
SMCHD1-213ENST00000609587 MRPL17Q9NRX2 175 aaKnown RBP3.68□□□□□ -1.82
SMCHD1-213ENST00000609587 TRPC4Q9UBN4 977 aa3.68□□□□□ -1.82
SMCHD1-213ENST00000609587 A0A087X0K7 114 aa3.67□□□□□ -1.82
SMCHD1-213ENST00000609587 SMIM30A4D0T7 59 aa3.67□□□□□ -1.82
SMCHD1-213ENST00000609587 H0YIG0 161 aa3.67□□□□□ -1.82
SMCHD1-213ENST00000609587 MAGEB2O15479 319 aa3.67□□□□□ -1.82
SMCHD1-213ENST00000609587 MLNRO43193 412 aa3.67□□□□□ -1.82
SMCHD1-213ENST00000609587 LETM1O95202 739 aaPredicted RBP3.67□□□□□ -1.82
SMCHD1-213ENST00000609587 GOSR1O95249 250 aa3.67□□□□□ -1.82
SMCHD1-213ENST00000609587 PRKACGP22612 351 aa3.67□□□□□ -1.82
SMCHD1-213ENST00000609587 CTNNA2P26232 953 aa3.67□□□□□ -1.82
SMCHD1-213ENST00000609587 OAS2P29728 719 aaKnown RBP3.67□□□□□ -1.82
SMCHD1-213ENST00000609587 CTNNB1P35222 781 aa3.67□□□□□ -1.82
SMCHD1-213ENST00000609587 SLC1A3P43003 542 aa3.67□□□□□ -1.82
SMCHD1-213ENST00000609587 KRTAP10-3P60369 221 aa3.67□□□□□ -1.82
SMCHD1-213ENST00000609587 IRX4P78413 519 aa3.67□□□□□ -1.82
SMCHD1-213ENST00000609587 CYCSP99999 105 aaKnown RBP3.67□□□□□ -1.82
SMCHD1-213ENST00000609587 SLC34A1Q06495 639 aa3.67□□□□□ -1.82
SMCHD1-213ENST00000609587 C17orf67Q0P5P2 114 aa3.67□□□□□ -1.82
SMCHD1-213ENST00000609587 GRB14Q14449 540 aa3.67□□□□□ -1.82
SMCHD1-213ENST00000609587 LRRC37A5PQ49AS3 106 aa3.67□□□□□ -1.82
SMCHD1-213ENST00000609587 AGAP6Q5VW22 663 aa3.67□□□□□ -1.82
SMCHD1-213ENST00000609587 CES4AQ5XG92 561 aa3.67□□□□□ -1.82
SMCHD1-213ENST00000609587 TCEAL6Q6IPX3 200 aa3.67□□□□□ -1.82
SMCHD1-213ENST00000609587 SLC27A4Q6P1M0 643 aa3.67□□□□□ -1.82
SMCHD1-213ENST00000609587 ZER1Q7Z7L7 766 aa3.67□□□□□ -1.82
SMCHD1-213ENST00000609587 CATSPERDQ86XM0 798 aa3.67□□□□□ -1.82
SMCHD1-213ENST00000609587 TEX26Q8N6G2 289 aa3.67□□□□□ -1.82
SMCHD1-213ENST00000609587 TMEM99Q8N816 258 aa3.67□□□□□ -1.82
SMCHD1-213ENST00000609587 ZNF519Q8TB69 540 aa3.67□□□□□ -1.82
SMCHD1-213ENST00000609587 SAP25Q8TEE9 199 aa3.67□□□□□ -1.82
SMCHD1-213ENST00000609587 CHURC1Q8WUH1 139 aa3.67□□□□□ -1.82
SMCHD1-213ENST00000609587 RFT1Q96AA3 541 aa3.67□□□□□ -1.82
SMCHD1-213ENST00000609587 PANX3Q96QZ0 392 aa3.67□□□□□ -1.82
SMCHD1-213ENST00000609587 ZNF300Q96RE9 604 aaPredicted RBP3.67□□□□□ -1.82
SMCHD1-213ENST00000609587 MTHFD2LQ9H903 347 aaPredicted RBP3.67□□□□□ -1.82
SMCHD1-213ENST00000609587 MED20Q9H944 212 aa3.67□□□□□ -1.82
SMCHD1-213ENST00000609587 LNPEPQ9UIQ6 1025 aa3.67□□□□□ -1.82
SMCHD1-213ENST00000609587 STX8Q9UNK0 236 aa3.67□□□□□ -1.82
SMCHD1-213ENST00000609587 PLCL2Q9UPR0 1127 aa3.67□□□□□ -1.82
SMCHD1-213ENST00000609587 TMED7Q9Y3B3 224 aa3.67□□□□□ -1.82
SMCHD1-213ENST00000609587 IGLV7-46A0A075B6I9 117 aa3.66□□□□□ -1.82
SMCHD1-213ENST00000609587 A0A0A6YYC8 382 aaPredicted RBP3.66□□□□□ -1.82
SMCHD1-213ENST00000609587 hCG_38984A0A1B0GV85 526 aa3.66□□□□□ -1.82
SMCHD1-213ENST00000609587 A0A1W2PRV1 198 aa3.66□□□□□ -1.82
SMCHD1-213ENST00000609587 MAGEB16A2A368 324 aa3.66□□□□□ -1.82
SMCHD1-213ENST00000609587 CCDC162PA2VCL2 907 aa3.66□□□□□ -1.82
SMCHD1-213ENST00000609587 FAM149AA5PLN7 773 aa3.66□□□□□ -1.82
SMCHD1-213ENST00000609587 NKX6-3A6NJ46 265 aa3.66□□□□□ -1.82
SMCHD1-213ENST00000609587 ZNF732B4DXR9 585 aa3.66□□□□□ -1.82
SMCHD1-213ENST00000609587 C19orf81C9J6K1 198 aa3.66□□□□□ -1.82
SMCHD1-213ENST00000609587 I3L1I5 382 aaPredicted RBP3.66□□□□□ -1.82
SMCHD1-213ENST00000609587 M0R296 226 aa3.66□□□□□ -1.82
SMCHD1-213ENST00000609587 ARHGEF9O43307 516 aa3.66□□□□□ -1.82
SMCHD1-213ENST00000609587 CLN5O75503 358 aa3.66□□□□□ -1.82
SMCHD1-213ENST00000609587 CEACAM4O75871 244 aa3.66□□□□□ -1.82
SMCHD1-213ENST00000609587 DUS4LO95620 317 aaKnown RBP3.66□□□□□ -1.82
SMCHD1-213ENST00000609587 SBK2P0C263 348 aa3.66□□□□□ -1.82
SMCHD1-213ENST00000609587 VCLP18206 1134 aa3.66□□□□□ -1.82
SMCHD1-213ENST00000609587 DEKP35659 375 aaKnown RBP3.66□□□□□ -1.82
SMCHD1-213ENST00000609587 KHKP50053 298 aa3.66□□□□□ -1.82
SMCHD1-213ENST00000609587 NME5P56597 212 aa3.66□□□□□ -1.82
SMCHD1-213ENST00000609587 HUNKP57058 714 aa3.66□□□□□ -1.82
SMCHD1-213ENST00000609587 SLC3A1Q07837 685 aa3.66□□□□□ -1.82
SMCHD1-213ENST00000609587 MAPK11Q15759 364 aa3.66□□□□□ -1.82
SMCHD1-213ENST00000609587 MTHFSDQ2M296 383 aaKnown RBP3.66□□□□□ -1.82
SMCHD1-213ENST00000609587 GLIPR1L2Q4G1C9 344 aa3.66□□□□□ -1.82
SMCHD1-213ENST00000609587 C17orf107Q6ZR85 190 aa3.66□□□□□ -1.82
SMCHD1-213ENST00000609587 RPAINQ86UA6 219 aa3.66□□□□□ -1.82
SMCHD1-213ENST00000609587 ZNF713Q8N859 430 aaPredicted RBP3.66□□□□□ -1.82
SMCHD1-213ENST00000609587 RNF149Q8NC42 400 aa3.66□□□□□ -1.82
SMCHD1-213ENST00000609587 MSANTD4Q8NCY6 345 aa3.66□□□□□ -1.82
SMCHD1-213ENST00000609587 SEPT8Q92599 483 aa3.66□□□□□ -1.82
SMCHD1-213ENST00000609587 WBP2Q969T9 261 aa3.66□□□□□ -1.82
SMCHD1-213ENST00000609587 LURAP1Q96LR2 239 aa3.66□□□□□ -1.82
SMCHD1-213ENST00000609587 CCDC43Q96MW1 224 aaKnown RBP3.66□□□□□ -1.82
SMCHD1-213ENST00000609587 PCDHB18PQ96TA0 734 aa3.66□□□□□ -1.82
SMCHD1-213ENST00000609587 OPRPNQ99935 248 aaPredicted RBP3.66□□□□□ -1.82
SMCHD1-213ENST00000609587 MTIF3Q9H2K0 278 aaKnown RBP3.66□□□□□ -1.82
SMCHD1-213ENST00000609587 B3GAT2Q9NPZ5 323 aa3.66□□□□□ -1.82
SMCHD1-213ENST00000609587 ZDHHC18Q9NUE0 388 aa3.66□□□□□ -1.82
SMCHD1-213ENST00000609587 SPG21Q9NZD8 308 aa3.66□□□□□ -1.82
SMCHD1-213ENST00000609587 MTRRQ9UBK8 725 aa3.66□□□□□ -1.82
SMCHD1-213ENST00000609587 DBF4Q9UBU7 674 aaPredicted RBP3.66□□□□□ -1.82
SMCHD1-213ENST00000609587 SPATA31D1Q6ZQQ2 1576 aa3.66□□□□□ -1.82
SMCHD1-213ENST00000609587 NEDD4P46934 1319 aa3.66□□□□□ -1.82
SMCHD1-213ENST00000609587 RNF123Q5XPI4 1314 aa3.66□□□□□ -1.82
SMCHD1-213ENST00000609587 ARID2Q68CP9 1835 aa3.65□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms