RNA–Protein interactions for RNA: ENST00000607841.5

CTSA-219, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 571 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-219ENST00000607841 TRMOQ9BU70 441 aa13.52□□□□□ -0.25
CTSA-219ENST00000607841 MS4A8Q9BY19 250 aa13.52□□□□□ -0.25
CTSA-219ENST00000607841 GSTO2Q9H4Y5 243 aa13.52□□□□□ -0.25
CTSA-219ENST00000607841 KLHL31Q9H511 634 aa13.52□□□□□ -0.25
CTSA-219ENST00000607841 C14orf105Q9NVL8 296 aa13.52□□□□□ -0.25
CTSA-219ENST00000607841 MRPS18BQ9Y676 258 aaKnown RBP13.52□□□□□ -0.25
CTSA-219ENST00000607841 SNRNP200O75643 2136 aaKnown RBP13.52□□□□□ -0.25
CTSA-219ENST00000607841 URB1O60287 2271 aaKnown RBP13.52□□□□□ -0.25
CTSA-219ENST00000607841 KMT2BQ9UMN6 2715 aaPredicted RBP13.52□□□□□ -0.25
CTSA-219ENST00000607841 IGLV3-12A0A075B6K2 115 aa13.51□□□□□ -0.25
CTSA-219ENST00000607841 VSTM2BA6NLU5 285 aa13.51□□□□□ -0.25
CTSA-219ENST00000607841 AGPSO00116 658 aa13.51□□□□□ -0.25
CTSA-219ENST00000607841 PPP6CO00743 305 aa13.51□□□□□ -0.25
CTSA-219ENST00000607841 KLF7O75840 302 aaPredicted RBP13.51□□□□□ -0.25
CTSA-219ENST00000607841 ESRRBO95718 433 aa13.51□□□□□ -0.25
CTSA-219ENST00000607841 TGFB1P01137 390 aa13.51□□□□□ -0.25
CTSA-219ENST00000607841 KRT6AP02538 564 aa13.51□□□□□ -0.25
CTSA-219ENST00000607841 KRT6BP04259 564 aa13.51□□□□□ -0.25
CTSA-219ENST00000607841 ENO1P06733 434 aaKnown RBP13.51□□□□□ -0.25
CTSA-219ENST00000607841 BPGMP07738 259 aa13.51□□□□□ -0.25
CTSA-219ENST00000607841 ZGLP1P0C6A0 271 aa13.51□□□□□ -0.25
CTSA-219ENST00000607841 ALDH3A1P30838 453 aa13.51□□□□□ -0.25
CTSA-219ENST00000607841 HNRNPH1P31943 449 aaKnown RBP13.51□□□□□ -0.25
CTSA-219ENST00000607841 ETV4P43268 484 aa13.51□□□□□ -0.25
CTSA-219ENST00000607841 KRT6CP48668 564 aa13.51□□□□□ -0.25
CTSA-219ENST00000607841 PLA2G16P53816 162 aa13.51□□□□□ -0.25
CTSA-219ENST00000607841 MAGOHP61326 146 aaKnown RBP13.51□□□□□ -0.25
CTSA-219ENST00000607841 RPS18P62269 152 aaKnown RBP13.51□□□□□ -0.25
CTSA-219ENST00000607841 BTN3A2P78410 334 aa13.51□□□□□ -0.25
CTSA-219ENST00000607841 ERV3-1Q14264 604 aa13.51□□□□□ -0.25
CTSA-219ENST00000607841 UGT8Q16880 541 aa13.51□□□□□ -0.25
CTSA-219ENST00000607841 DEPDC1Q5TB30 811 aa13.51□□□□□ -0.25
CTSA-219ENST00000607841 AGBL2Q5U5Z8 902 aa13.51□□□□□ -0.25
CTSA-219ENST00000607841 KHDRBS2Q5VWX1 349 aaKnown RBP13.51□□□□□ -0.25
CTSA-219ENST00000607841 ADNP2Q6IQ32 1131 aa13.51□□□□□ -0.25
CTSA-219ENST00000607841 LETMD1Q6P1Q0 360 aa13.51□□□□□ -0.25
CTSA-219ENST00000607841 C19orf48Q6RUI8 117 aa13.51□□□□□ -0.25
CTSA-219ENST00000607841 FRMD7Q6ZUT3 714 aa13.51□□□□□ -0.25
CTSA-219ENST00000607841 PRSS41Q7RTY9 318 aa13.51□□□□□ -0.25
CTSA-219ENST00000607841 GPR155Q7Z3F1 870 aa13.51□□□□□ -0.25
CTSA-219ENST00000607841 PDSS2Q86YH6 399 aa13.51□□□□□ -0.25
CTSA-219ENST00000607841 AMER3Q8N944 861 aa13.51□□□□□ -0.25
CTSA-219ENST00000607841 OR51Q1Q8NH59 317 aa13.51□□□□□ -0.25
CTSA-219ENST00000607841 METTL6Q8TCB7 284 aa13.51□□□□□ -0.25
CTSA-219ENST00000607841 STT3BQ8TCJ2 826 aa13.51□□□□□ -0.25
CTSA-219ENST00000607841 THAP4Q8WY91 577 aa13.51□□□□□ -0.25
CTSA-219ENST00000607841 NACC2Q96BF6 587 aa13.51□□□□□ -0.25
CTSA-219ENST00000607841 CATSPER2Q96P56 530 aa13.51□□□□□ -0.25
CTSA-219ENST00000607841 F2RL3Q96RI0 385 aa13.51□□□□□ -0.25
CTSA-219ENST00000607841 MTERF1Q99551 399 aaKnown RBP13.51□□□□□ -0.25
CTSA-219ENST00000607841 TBCDQ9BTW9 1192 aa13.51□□□□□ -0.25
CTSA-219ENST00000607841 NPLQ9BXD5 320 aaPredicted RBP13.51□□□□□ -0.25
CTSA-219ENST00000607841 SLC29A3Q9BZD2 475 aa13.51□□□□□ -0.25
CTSA-219ENST00000607841 TGIF2Q9GZN2 237 aa13.51□□□□□ -0.25
CTSA-219ENST00000607841 ACBD3Q9H3P7 528 aa13.51□□□□□ -0.25
CTSA-219ENST00000607841 COPS7BQ9H9Q2 264 aaPredicted RBP13.51□□□□□ -0.25
CTSA-219ENST00000607841 MID1IP1Q9NPA3 183 aa13.51□□□□□ -0.25
CTSA-219ENST00000607841 DMRT3Q9NQL9 472 aa13.51□□□□□ -0.25
CTSA-219ENST00000607841 ACSS2Q9NR19 701 aa13.51□□□□□ -0.25
CTSA-219ENST00000607841 CTSFQ9UBX1 484 aa13.51□□□□□ -0.25
CTSA-219ENST00000607841 PPT2Q9UMR5 302 aa13.51□□□□□ -0.25
CTSA-219ENST00000607841 ACACAQ13085 2346 aa13.5□□□□□ -0.25
CTSA-219ENST00000607841 AHCTF1Q8WYP5 2266 aa13.5□□□□□ -0.25
CTSA-219ENST00000607841 MAGEB17A8MXT2 336 aa13.5□□□□□ -0.25
CTSA-219ENST00000607841 FFAR3O14843 346 aa13.5□□□□□ -0.25
CTSA-219ENST00000607841 NKX2-8O15522 239 aa13.5□□□□□ -0.25
CTSA-219ENST00000607841 GPR42O15529 346 aa13.5□□□□□ -0.25
CTSA-219ENST00000607841 NPHS1O60500 1241 aa13.5□□□□□ -0.25
CTSA-219ENST00000607841 RDH16O75452 317 aa13.5□□□□□ -0.25
CTSA-219ENST00000607841 CRCPO75575 148 aa13.5□□□□□ -0.25
CTSA-219ENST00000607841 OR4F21O95013 312 aa13.5□□□□□ -0.25
CTSA-219ENST00000607841 TBX6O95947 436 aaPredicted RBP13.5□□□□□ -0.25
CTSA-219ENST00000607841 IGHEP01854 428 aa13.5□□□□□ -0.25
CTSA-219ENST00000607841 HMOX2P30519 316 aa13.5□□□□□ -0.25
CTSA-219ENST00000607841 SERPINB5P36952 375 aa13.5□□□□□ -0.25
CTSA-219ENST00000607841 TSFMP43897 325 aaKnown RBP13.5□□□□□ -0.25
CTSA-219ENST00000607841 SERPINB4P48594 390 aa13.5□□□□□ -0.25
CTSA-219ENST00000607841 NEK2P51955 445 aa13.5□□□□□ -0.25
CTSA-219ENST00000607841 RAP1GDS1P52306 607 aa13.5□□□□□ -0.25
CTSA-219ENST00000607841 ARFIP1P53367 373 aa13.5□□□□□ -0.25
CTSA-219ENST00000607841 SLC18A1P54219 525 aa13.5□□□□□ -0.25
CTSA-219ENST00000607841 RPS13P62277 151 aaKnown RBP13.5□□□□□ -0.25
CTSA-219ENST00000607841 MAT1AQ00266 395 aaKnown RBP13.5□□□□□ -0.25
CTSA-219ENST00000607841 ZNF33BQ06732 778 aa13.5□□□□□ -0.25
CTSA-219ENST00000607841 CDC20Q12834 499 aa13.5□□□□□ -0.25
CTSA-219ENST00000607841 CUL3Q13618 768 aa13.5□□□□□ -0.25
CTSA-219ENST00000607841 COL28A1Q2UY09 1125 aa13.5□□□□□ -0.25
CTSA-219ENST00000607841 AP5B1Q2VPB7 878 aa13.5□□□□□ -0.25
CTSA-219ENST00000607841 ABHD17CQ6PCB6 329 aa13.5□□□□□ -0.25
CTSA-219ENST00000607841 RAB43Q86YS6 212 aa13.5□□□□□ -0.25
CTSA-219ENST00000607841 NUDCD3Q8IVD9 361 aa13.5□□□□□ -0.25
CTSA-219ENST00000607841 CDYL2Q8N8U2 506 aa13.5□□□□□ -0.25
CTSA-219ENST00000607841 PPP1R14CQ8TAE6 165 aa13.5□□□□□ -0.25
CTSA-219ENST00000607841 AGAP11Q8TF27 550 aa13.5□□□□□ -0.25
CTSA-219ENST00000607841 SELENOMQ8WWX9 145 aa13.5□□□□□ -0.25
CTSA-219ENST00000607841 RGMAQ96B86 450 aa13.5□□□□□ -0.25
CTSA-219ENST00000607841 TLCD1Q96CP7 247 aa13.5□□□□□ -0.25
CTSA-219ENST00000607841 VPS50Q96JG6 964 aa13.5□□□□□ -0.25
CTSA-219ENST00000607841 IP6K3Q96PC2 410 aa13.5□□□□□ -0.25
CTSA-219ENST00000607841 SERINC2Q96SA4 455 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms