RNA–Protein interactions for RNA: ENST00000602574.5

COMMD3-215, Transcript of COMM domain containing 3, humanhuman

TSL 1 (best)

Gene COMMD3, Length 2,290 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-215ENST00000602574 FOXE1O00358 373 aaPredicted RBP8.56□□□□□ -1.04
COMMD3-215ENST00000602574 FABP7O15540 132 aa8.56□□□□□ -1.04
COMMD3-215ENST00000602574 ORC5O43913 435 aa8.56□□□□□ -1.04
COMMD3-215ENST00000602574 ZMPSTE24O75844 475 aa8.56□□□□□ -1.04
COMMD3-215ENST00000602574 BEST1O76090 585 aa8.56□□□□□ -1.04
COMMD3-215ENST00000602574 PDE8BO95263 885 aa8.56□□□□□ -1.04
COMMD3-215ENST00000602574 LATS1O95835 1130 aa8.56□□□□□ -1.04
COMMD3-215ENST00000602574 ODC1P11926 461 aa8.56□□□□□ -1.04
COMMD3-215ENST00000602574 TSPAN8P19075 237 aa8.56□□□□□ -1.04
COMMD3-215ENST00000602574 LHCGRP22888 699 aa8.56□□□□□ -1.04
COMMD3-215ENST00000602574 OR1E1P30953 314 aa8.56□□□□□ -1.04
COMMD3-215ENST00000602574 SERPINF1P36955 418 aa8.56□□□□□ -1.04
COMMD3-215ENST00000602574 NRIP1P48552 1158 aa8.56□□□□□ -1.04
COMMD3-215ENST00000602574 CXCR4P61073 352 aa8.56□□□□□ -1.04
COMMD3-215ENST00000602574 PRKAA1Q13131 559 aa8.56□□□□□ -1.04
COMMD3-215ENST00000602574 GPRC6AQ5T6X5 926 aa8.56□□□□□ -1.04
COMMD3-215ENST00000602574 MBLAC2Q68D91 279 aa8.56□□□□□ -1.04
COMMD3-215ENST00000602574 FBXO46Q6PJ61 603 aaPredicted RBP8.56□□□□□ -1.04
COMMD3-215ENST00000602574 SLC46A3Q7Z3Q1 461 aa8.56□□□□□ -1.04
COMMD3-215ENST00000602574 RASGEF1AQ8N9B8 481 aa8.56□□□□□ -1.04
COMMD3-215ENST00000602574 TRMT10AQ8TBZ6 339 aaKnown RBP8.56□□□□□ -1.04
COMMD3-215ENST00000602574 S100PBPQ96BU1 408 aa8.56□□□□□ -1.04
COMMD3-215ENST00000602574 MBOAT7Q96N66 472 aa8.56□□□□□ -1.04
COMMD3-215ENST00000602574 NECTIN4Q96NY8 510 aa8.56□□□□□ -1.04
COMMD3-215ENST00000602574 TAAR1Q96RJ0 339 aa8.56□□□□□ -1.04
COMMD3-215ENST00000602574 KLF6Q99612 283 aaPredicted RBP8.56□□□□□ -1.04
COMMD3-215ENST00000602574 NT5DC2Q9H857 520 aa8.56□□□□□ -1.04
COMMD3-215ENST00000602574 EVA1AQ9H8M9 152 aa8.56□□□□□ -1.04
COMMD3-215ENST00000602574 GPRC5CQ9NQ84 441 aa8.56□□□□□ -1.04
COMMD3-215ENST00000602574 OAZ3Q9UMX2 235 aa8.56□□□□□ -1.04
COMMD3-215ENST00000602574 ATRNL1Q5VV63 1379 aa8.55□□□□□ -1.04
COMMD3-215ENST00000602574 TSTD3H0UI37 97 aa8.55□□□□□ -1.04
COMMD3-215ENST00000602574 SOCS7O14512 581 aa8.55□□□□□ -1.04
COMMD3-215ENST00000602574 RAD17O75943 681 aa8.55□□□□□ -1.04
COMMD3-215ENST00000602574 SCAF4O95104 1147 aaKnown RBP8.55□□□□□ -1.04
COMMD3-215ENST00000602574 HLA-DQB1P01920 261 aa8.55□□□□□ -1.04
COMMD3-215ENST00000602574 MPOP05164 745 aa8.55□□□□□ -1.04
COMMD3-215ENST00000602574 S100A11P31949 105 aa8.55□□□□□ -1.04
COMMD3-215ENST00000602574 SLC1A6P48664 564 aa8.55□□□□□ -1.04
COMMD3-215ENST00000602574 MARCKSL1P49006 195 aa8.55□□□□□ -1.04
COMMD3-215ENST00000602574 SUOXP51687 545 aa8.55□□□□□ -1.04
COMMD3-215ENST00000602574 RAP1AP62834 184 aa8.55□□□□□ -1.04
COMMD3-215ENST00000602574 POU4F1Q01851 419 aa8.55□□□□□ -1.04
COMMD3-215ENST00000602574 NAE1Q13564 534 aa8.55□□□□□ -1.04
COMMD3-215ENST00000602574 IL17AQ16552 155 aa8.55□□□□□ -1.04
COMMD3-215ENST00000602574 TBCELQ5QJ74 424 aa8.55□□□□□ -1.04
COMMD3-215ENST00000602574 LGSNQ5TDP6 509 aa8.55□□□□□ -1.04
COMMD3-215ENST00000602574 B3GNTL1Q67FW5 361 aaPredicted RBP8.55□□□□□ -1.04
COMMD3-215ENST00000602574 ACAD10Q6JQN1 1059 aa8.55□□□□□ -1.04
COMMD3-215ENST00000602574 AFTPHQ6ULP2 937 aa8.55□□□□□ -1.04
COMMD3-215ENST00000602574 BAIAP2L2Q6UXY1 529 aa8.55□□□□□ -1.04
COMMD3-215ENST00000602574 CERS6Q6ZMG9 384 aa8.55□□□□□ -1.04
COMMD3-215ENST00000602574 CHMP1BQ7LBR1 199 aa8.55□□□□□ -1.04
COMMD3-215ENST00000602574 GPIHBP1Q8IV16 184 aa8.55□□□□□ -1.04
COMMD3-215ENST00000602574 TRIM48Q8IWZ4 208 aa8.55□□□□□ -1.04
COMMD3-215ENST00000602574 GPR65Q8IYL9 337 aa8.55□□□□□ -1.04
COMMD3-215ENST00000602574 OSCARQ8IYS5 282 aa8.55□□□□□ -1.04
COMMD3-215ENST00000602574 ZNF383Q8NA42 475 aa8.55□□□□□ -1.04
COMMD3-215ENST00000602574 NLGN4YQ8NFZ3 816 aaPredicted RBP8.55□□□□□ -1.04
COMMD3-215ENST00000602574 ZNF671Q8TAW3 534 aa8.55□□□□□ -1.04
COMMD3-215ENST00000602574 ZSCAN18Q8TBC5 510 aaPredicted RBP8.55□□□□□ -1.04
COMMD3-215ENST00000602574 WDR20Q8TBZ3 569 aa8.55□□□□□ -1.04
COMMD3-215ENST00000602574 MRGPRDQ8TDS7 321 aa8.55□□□□□ -1.04
COMMD3-215ENST00000602574 LARP4BQ92615 738 aaKnown RBP8.55□□□□□ -1.04
COMMD3-215ENST00000602574 FOXRED1Q96CU9 486 aaPredicted RBP8.55□□□□□ -1.04
COMMD3-215ENST00000602574 ZNF514Q96K75 400 aaPredicted RBP8.55□□□□□ -1.04
COMMD3-215ENST00000602574 RPL10LQ96L21 214 aaKnown RBP8.55□□□□□ -1.04
COMMD3-215ENST00000602574 NPAS2Q99743 824 aa8.55□□□□□ -1.04
COMMD3-215ENST00000602574 SH2D3AQ9BRG2 576 aa8.55□□□□□ -1.04
COMMD3-215ENST00000602574 MARVELD1Q9BSK0 173 aa8.55□□□□□ -1.04
COMMD3-215ENST00000602574 RAB34Q9BZG1 259 aa8.55□□□□□ -1.04
COMMD3-215ENST00000602574 EGLN1Q9GZT9 426 aa8.55□□□□□ -1.04
COMMD3-215ENST00000602574 ZFP57Q9NU63 452 aa8.55□□□□□ -1.04
COMMD3-215ENST00000602574 WBP1LQ9NX94 342 aa8.55□□□□□ -1.04
COMMD3-215ENST00000602574 NLGN3Q9NZ94 848 aa8.55□□□□□ -1.04
COMMD3-215ENST00000602574 OR12D3Q9UGF7 316 aa8.55□□□□□ -1.04
COMMD3-215ENST00000602574 DNPEPQ9ULA0 475 aa8.55□□□□□ -1.04
COMMD3-215ENST00000602574 OGDHLQ9ULD0 1010 aa8.55□□□□□ -1.04
COMMD3-215ENST00000602574 MINPP1Q9UNW1 487 aa8.55□□□□□ -1.04
COMMD3-215ENST00000602574 ROBO3Q96MS0 1386 aa8.55□□□□□ -1.04
COMMD3-215ENST00000602574 PLSCR5A0PG75 271 aa8.55□□□□□ -1.04
COMMD3-215ENST00000602574 K7ERI5 159 aa8.55□□□□□ -1.04
COMMD3-215ENST00000602574 M0R2N6 131 aa8.55□□□□□ -1.04
COMMD3-215ENST00000602574 CRYBA1P05813 215 aa8.55□□□□□ -1.04
COMMD3-215ENST00000602574 MMP10P09238 476 aa8.55□□□□□ -1.04
COMMD3-215ENST00000602574 HIST1H1BP16401 226 aaKnown RBP8.55□□□□□ -1.04
COMMD3-215ENST00000602574 COMTP21964 271 aa8.55□□□□□ -1.04
COMMD3-215ENST00000602574 THBS4P35443 961 aa8.55□□□□□ -1.04
COMMD3-215ENST00000602574 PMELP40967 661 aa8.55□□□□□ -1.04
COMMD3-215ENST00000602574 GABRB2P47870 512 aa8.55□□□□□ -1.04
COMMD3-215ENST00000602574 GCGRP47871 477 aa8.55□□□□□ -1.04
COMMD3-215ENST00000602574 GTF2A2P52657 109 aa8.55□□□□□ -1.04
COMMD3-215ENST00000602574 ACSM1Q08AH1 577 aa8.55□□□□□ -1.04
COMMD3-215ENST00000602574 ELAVL2Q12926 359 aaKnown RBP8.55□□□□□ -1.04
COMMD3-215ENST00000602574 PTP4A2Q12974 167 aa8.55□□□□□ -1.04
COMMD3-215ENST00000602574 INTS6LQ5JSJ4 861 aaKnown RBP8.55□□□□□ -1.04
COMMD3-215ENST00000602574 FAM74A1Q5RGS3 127 aa8.55□□□□□ -1.04
COMMD3-215ENST00000602574 PRAMEF19Q5SWL8 479 aa8.55□□□□□ -1.04
COMMD3-215ENST00000602574 FDX2Q6P4F2 183 aa8.55□□□□□ -1.04
COMMD3-215ENST00000602574 PAMR1Q6UXH9 720 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms