RNA–Protein interactions for RNA: ENST00000600274.5

ARHGEF1-220, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 1 (best)

Gene ARHGEF1, Length 3,439 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-220ENST00000600274 TRPC1P48995 793 aa11.06□□□□□ -0.64
ARHGEF1-220ENST00000600274 PCYT1AP49585 367 aa11.06□□□□□ -0.64
ARHGEF1-220ENST00000600274 DAPP51397 102 aa11.06□□□□□ -0.64
ARHGEF1-220ENST00000600274 ZNF763Q0D2J5 394 aa11.06□□□□□ -0.64
ARHGEF1-220ENST00000600274 RPS26P11Q5JNZ5 115 aaPredicted RBP11.06□□□□□ -0.64
ARHGEF1-220ENST00000600274 TMEM31Q5JXX7 168 aa11.06□□□□□ -0.64
ARHGEF1-220ENST00000600274 FBXO46Q6PJ61 603 aaPredicted RBP11.06□□□□□ -0.64
ARHGEF1-220ENST00000600274 ADCK1Q86TW2 530 aa11.06□□□□□ -0.64
ARHGEF1-220ENST00000600274 SVOPLQ8N434 492 aa11.06□□□□□ -0.64
ARHGEF1-220ENST00000600274 HDDC3Q8N4P3 179 aa11.06□□□□□ -0.64
ARHGEF1-220ENST00000600274 SLC15A4Q8N697 577 aa11.06□□□□□ -0.64
ARHGEF1-220ENST00000600274 CENPOQ9BU64 300 aa11.06□□□□□ -0.64
ARHGEF1-220ENST00000600274 FAM120CQ9NX05 1096 aaKnown RBP11.06□□□□□ -0.64
ARHGEF1-220ENST00000600274 GPSM3Q9Y4H4 160 aa11.06□□□□□ -0.64
ARHGEF1-220ENST00000600274 SH3PXD2BA1X283 911 aa11.06□□□□□ -0.64
ARHGEF1-220ENST00000600274 ERAL1O75616 437 aaKnown RBP11.06□□□□□ -0.64
ARHGEF1-220ENST00000600274 SOD1P00441 154 aa11.06□□□□□ -0.64
ARHGEF1-220ENST00000600274 CRHBPP24387 322 aa11.06□□□□□ -0.64
ARHGEF1-220ENST00000600274 BMXP51813 675 aa11.06□□□□□ -0.64
ARHGEF1-220ENST00000600274 EMP3P54852 163 aa11.06□□□□□ -0.64
ARHGEF1-220ENST00000600274 GBX1Q14549 363 aa11.06□□□□□ -0.64
ARHGEF1-220ENST00000600274 RGNQ15493 299 aa11.06□□□□□ -0.64
ARHGEF1-220ENST00000600274 C9orf50Q5SZB4 431 aa11.06□□□□□ -0.64
ARHGEF1-220ENST00000600274 C1orf53Q5VUE5 145 aa11.06□□□□□ -0.64
ARHGEF1-220ENST00000600274 C17orf64Q86WR6 236 aa11.06□□□□□ -0.64
ARHGEF1-220ENST00000600274 CROCCP3Q8IVE0 287 aa11.06□□□□□ -0.64
ARHGEF1-220ENST00000600274 SLC7A5P1Q8MH63 180 aa11.06□□□□□ -0.64
ARHGEF1-220ENST00000600274 TAGAPQ8N103 731 aa11.06□□□□□ -0.64
ARHGEF1-220ENST00000600274 TERB1Q8NA31 727 aa11.06□□□□□ -0.64
ARHGEF1-220ENST00000600274 ZBTB8BQ8NAP8 495 aaPredicted RBP11.06□□□□□ -0.64
ARHGEF1-220ENST00000600274 LEMD2Q8NC56 503 aa11.06□□□□□ -0.64
ARHGEF1-220ENST00000600274 C11orf65Q8NCR3 313 aa11.06□□□□□ -0.64
ARHGEF1-220ENST00000600274 BORCS5Q969J3 196 aa11.06□□□□□ -0.64
ARHGEF1-220ENST00000600274 C12orf66Q96MD2 445 aa11.06□□□□□ -0.64
ARHGEF1-220ENST00000600274 NDEL1Q9GZM8 345 aa11.06□□□□□ -0.64
ARHGEF1-220ENST00000600274 TMEM245Q9H330 911 aa11.06□□□□□ -0.64
ARHGEF1-220ENST00000600274 RAD18Q9NS91 495 aa11.06□□□□□ -0.64
ARHGEF1-220ENST00000600274 WDR70Q9NW82 654 aa11.06□□□□□ -0.64
ARHGEF1-220ENST00000600274 SPATA6Q9NWH7 488 aaPredicted RBP11.06□□□□□ -0.64
ARHGEF1-220ENST00000600274 TRPC4Q9UBN4 977 aa11.06□□□□□ -0.64
ARHGEF1-220ENST00000600274 SERGEFQ9UGK8 458 aa11.06□□□□□ -0.64
ARHGEF1-220ENST00000600274 A0A0C4DFX4 3053 aa11.06□□□□□ -0.64
ARHGEF1-220ENST00000600274 A0A1W2PRB8 838 aa11.06□□□□□ -0.64
ARHGEF1-220ENST00000600274 H0YAE9 185 aa11.06□□□□□ -0.64
ARHGEF1-220ENST00000600274 SLC1A7O00341 560 aa11.06□□□□□ -0.64
ARHGEF1-220ENST00000600274 SPINT1O43278 529 aa11.06□□□□□ -0.64
ARHGEF1-220ENST00000600274 PRKRAO75569 313 aaKnown RBP11.06□□□□□ -0.64
ARHGEF1-220ENST00000600274 SLC35G4P0C7Q5 338 aa11.06□□□□□ -0.64
ARHGEF1-220ENST00000600274 GPC1P35052 558 aa11.06□□□□□ -0.64
ARHGEF1-220ENST00000600274 MAGEA8P43361 318 aa11.06□□□□□ -0.64
ARHGEF1-220ENST00000600274 ASMTP46597 345 aa11.06□□□□□ -0.64
ARHGEF1-220ENST00000600274 EPHA5P54756 1037 aa11.06□□□□□ -0.64
ARHGEF1-220ENST00000600274 DCDC1P59894 354 aa11.06□□□□□ -0.64
ARHGEF1-220ENST00000600274 SLC5A12Q1EHB4 618 aa11.06□□□□□ -0.64
ARHGEF1-220ENST00000600274 P3H2Q8IVL5 708 aa11.06□□□□□ -0.64
ARHGEF1-220ENST00000600274 NLGN4XQ8N0W4 816 aa11.06□□□□□ -0.64
ARHGEF1-220ENST00000600274 OR14C36Q8NHC7 312 aa11.06□□□□□ -0.64
ARHGEF1-220ENST00000600274 LZICQ8WZA0 190 aa11.06□□□□□ -0.64
ARHGEF1-220ENST00000600274 SMARCD2Q92925 531 aa11.06□□□□□ -0.64
ARHGEF1-220ENST00000600274 OTUB2Q96DC9 234 aa11.06□□□□□ -0.64
ARHGEF1-220ENST00000600274 FAM129BQ96TA1 746 aa11.06□□□□□ -0.64
ARHGEF1-220ENST00000600274 KLHL42Q9P2K6 505 aa11.06□□□□□ -0.64
ARHGEF1-220ENST00000600274 SNX11Q9Y5W9 270 aa11.06□□□□□ -0.64
ARHGEF1-220ENST00000600274 IRAK3Q9Y616 596 aa11.06□□□□□ -0.64
ARHGEF1-220ENST00000600274 TRANK1O15050 2925 aa11.06□□□□□ -0.64
ARHGEF1-220ENST00000600274 C5orf58C9J3I9 102 aa11.05□□□□□ -0.64
ARHGEF1-220ENST00000600274 C1QTNF3-AMACRE9PGA6 284 aa11.05□□□□□ -0.64
ARHGEF1-220ENST00000600274 FAM227AF5H4B4 570 aa11.05□□□□□ -0.64
ARHGEF1-220ENST00000600274 NPC1O15118 1278 aa11.05□□□□□ -0.64
ARHGEF1-220ENST00000600274 GDI1P31150 447 aa11.05□□□□□ -0.64
ARHGEF1-220ENST00000600274 PPM1FP49593 454 aaPredicted RBP11.05□□□□□ -0.64
ARHGEF1-220ENST00000600274 SEPHS1P49903 392 aa11.05□□□□□ -0.64
ARHGEF1-220ENST00000600274 MAPK12P53778 367 aa11.05□□□□□ -0.64
ARHGEF1-220ENST00000600274 MANFP55145 182 aaKnown RBP11.05□□□□□ -0.64
ARHGEF1-220ENST00000600274 DPY19L1Q2PZI1 675 aa11.05□□□□□ -0.64
ARHGEF1-220ENST00000600274 CCDC92Q53HC0 331 aaPredicted RBP11.05□□□□□ -0.64
ARHGEF1-220ENST00000600274 SPIN4Q56A73 249 aa11.05□□□□□ -0.64
ARHGEF1-220ENST00000600274 CDKL4Q5MAI5 379 aa11.05□□□□□ -0.64
ARHGEF1-220ENST00000600274 CALHM3Q86XJ0 350 aa11.05□□□□□ -0.64
ARHGEF1-220ENST00000600274 SPARTQ8N0X7 666 aa11.05□□□□□ -0.64
ARHGEF1-220ENST00000600274 OR56A3Q8NH54 315 aa11.05□□□□□ -0.64
ARHGEF1-220ENST00000600274 DOK4Q8TEW6 326 aa11.05□□□□□ -0.64
ARHGEF1-220ENST00000600274 C16orf78Q8WTQ4 265 aa11.05□□□□□ -0.64
ARHGEF1-220ENST00000600274 HTRA1Q92743 480 aa11.05□□□□□ -0.64
ARHGEF1-220ENST00000600274 RAD51AP1Q96B01 352 aa11.05□□□□□ -0.64
ARHGEF1-220ENST00000600274 DMRT3Q9NQL9 472 aa11.05□□□□□ -0.64
ARHGEF1-220ENST00000600274 MBNL1Q9NR56 388 aaKnown RBP11.05□□□□□ -0.64
ARHGEF1-220ENST00000600274 SIRT5Q9NXA8 310 aa11.05□□□□□ -0.64
ARHGEF1-220ENST00000600274 MAN2B2Q9Y2E5 1009 aa11.05□□□□□ -0.64
ARHGEF1-220ENST00000600274 TANC1Q9C0D5 1861 aa11.05□□□□□ -0.64
ARHGEF1-220ENST00000600274 H0YIV9 168 aa11.05□□□□□ -0.64
ARHGEF1-220ENST00000600274 TNFRSF11BO00300 401 aa11.05□□□□□ -0.64
ARHGEF1-220ENST00000600274 SCN2BO60939 215 aa11.05□□□□□ -0.64
ARHGEF1-220ENST00000600274 SRPRAP08240 638 aaKnown RBP11.05□□□□□ -0.64
ARHGEF1-220ENST00000600274 HSMCR30P0CW71 290 aa11.05□□□□□ -0.64
ARHGEF1-220ENST00000600274 ITGB7P26010 798 aa11.05□□□□□ -0.64
ARHGEF1-220ENST00000600274 SCARB2Q14108 478 aa11.05□□□□□ -0.64
ARHGEF1-220ENST00000600274 SYT16Q17RD7 645 aa11.05□□□□□ -0.64
ARHGEF1-220ENST00000600274 NXPE4Q6UWF7 544 aa11.05□□□□□ -0.64
ARHGEF1-220ENST00000600274 VITQ6UXI7 678 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms