RNA–Protein interactions for RNA: ENST00000596136.5

USE1-207, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 1 (best) BASIC

Gene USE1, Length 637 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-207ENST00000596136 FBXO48Q5FWF7 155 aa12.3□□□□□ -0.44
USE1-207ENST00000596136 LANCL3Q6ZV70 420 aa12.3□□□□□ -0.44
USE1-207ENST00000596136 VN1R5Q7Z5H4 357 aa12.3□□□□□ -0.44
USE1-207ENST00000596136 ANKRD37Q7Z713 158 aa12.3□□□□□ -0.44
USE1-207ENST00000596136 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP12.3□□□□□ -0.44
USE1-207ENST00000596136 GALNT11Q8NCW6 608 aa12.3□□□□□ -0.44
USE1-207ENST00000596136 KCTD4Q8WVF5 259 aa12.3□□□□□ -0.44
USE1-207ENST00000596136 TBC1D20Q96BZ9 403 aa12.3□□□□□ -0.44
USE1-207ENST00000596136 MS4A6EQ96DS6 147 aa12.3□□□□□ -0.44
USE1-207ENST00000596136 TRIM44Q96DX7 344 aaPredicted RBP12.3□□□□□ -0.44
USE1-207ENST00000596136 PTCD3Q96EY7 689 aaKnown RBP12.3□□□□□ -0.44
USE1-207ENST00000596136 PEX11GQ96HA9 241 aa12.3□□□□□ -0.44
USE1-207ENST00000596136 EFCAB11Q9BUY7 163 aa12.3□□□□□ -0.44
USE1-207ENST00000596136 C19orf25Q9UFG5 118 aaPredicted RBP12.3□□□□□ -0.44
USE1-207ENST00000596136 ZNF180Q9UJW8 692 aa12.3□□□□□ -0.44
USE1-207ENST00000596136 USP9XQ93008 2570 aaPredicted RBP12.3□□□□□ -0.44
USE1-207ENST00000596136 CPAMD8Q8IZJ3 1885 aa12.29□□□□□ -0.44
USE1-207ENST00000596136 PTPN13Q12923 2485 aa12.29□□□□□ -0.44
USE1-207ENST00000596136 A0A096LPK6 155 aa12.29□□□□□ -0.44
USE1-207ENST00000596136 ZNF860A6NHJ4 632 aa12.29□□□□□ -0.44
USE1-207ENST00000596136 UBXN8O00124 270 aa12.29□□□□□ -0.44
USE1-207ENST00000596136 ZIC2O95409 532 aaPredicted RBP12.29□□□□□ -0.44
USE1-207ENST00000596136 TYK2P29597 1187 aa12.29□□□□□ -0.44
USE1-207ENST00000596136 SERPINB9P50453 376 aa12.29□□□□□ -0.44
USE1-207ENST00000596136 RAB8AP61006 207 aa12.29□□□□□ -0.44
USE1-207ENST00000596136 IRF9Q00978 393 aa12.29□□□□□ -0.44
USE1-207ENST00000596136 TOR1AIP1Q5JTV8 583 aa12.29□□□□□ -0.44
USE1-207ENST00000596136 PLAG1Q6DJT9 500 aa12.29□□□□□ -0.44
USE1-207ENST00000596136 H3F3CQ6NXT2 135 aa12.29□□□□□ -0.44
USE1-207ENST00000596136 CUZD1Q86UP6 607 aa12.29□□□□□ -0.44
USE1-207ENST00000596136 ATCAYQ86WG3 371 aa12.29□□□□□ -0.44
USE1-207ENST00000596136 IQCKQ8N0W5 287 aa12.29□□□□□ -0.44
USE1-207ENST00000596136 BRIX1Q8TDN6 353 aaKnown RBP12.29□□□□□ -0.44
USE1-207ENST00000596136 HAS2Q92819 552 aa12.29□□□□□ -0.44
USE1-207ENST00000596136 GAL3ST3Q96A11 431 aa12.29□□□□□ -0.44
USE1-207ENST00000596136 MRRFQ96E11 262 aaKnown RBP12.29□□□□□ -0.44
USE1-207ENST00000596136 PAFAH2Q99487 392 aa12.29□□□□□ -0.44
USE1-207ENST00000596136 NPLQ9BXD5 320 aaPredicted RBP12.29□□□□□ -0.44
USE1-207ENST00000596136 EPS8L2Q9H6S3 715 aa12.29□□□□□ -0.44
USE1-207ENST00000596136 PCDHGA10Q9Y5H3 936 aa12.29□□□□□ -0.44
USE1-207ENST00000596136 POLEQ07864 2286 aa12.28□□□□□ -0.44
USE1-207ENST00000596136 ANKDD1BA6NHY2 528 aa12.28□□□□□ -0.44
USE1-207ENST00000596136 SUPT3HB4E1H0 165 aa12.28□□□□□ -0.44
USE1-207ENST00000596136 K7EPI3 171 aa12.28□□□□□ -0.44
USE1-207ENST00000596136 CCNT2O60583 730 aaKnown RBP12.28□□□□□ -0.44
USE1-207ENST00000596136 SUPT3HO75486 399 aa12.28□□□□□ -0.44
USE1-207ENST00000596136 CELA2AP08217 269 aa12.28□□□□□ -0.44
USE1-207ENST00000596136 INHBAP08476 426 aa12.28□□□□□ -0.44
USE1-207ENST00000596136 ABHD2P08910 425 aa12.28□□□□□ -0.44
USE1-207ENST00000596136 ITGAMP11215 1152 aa12.28□□□□□ -0.44
USE1-207ENST00000596136 RNH1P13489 461 aaKnown RBP12.28□□□□□ -0.44
USE1-207ENST00000596136 JAK1P23458 1154 aa12.28□□□□□ -0.44
USE1-207ENST00000596136 CNTFP26441 200 aa12.28□□□□□ -0.44
USE1-207ENST00000596136 HNRNPH1P31943 449 aaKnown RBP12.28□□□□□ -0.44
USE1-207ENST00000596136 HPDP32754 393 aaPredicted RBP12.28□□□□□ -0.44
USE1-207ENST00000596136 HNF4AP41235 474 aa12.28□□□□□ -0.44
USE1-207ENST00000596136 TSFMP43897 325 aaKnown RBP12.28□□□□□ -0.44
USE1-207ENST00000596136 IRF8Q02556 426 aa12.28□□□□□ -0.44
USE1-207ENST00000596136 CHIT1Q13231 466 aa12.28□□□□□ -0.44
USE1-207ENST00000596136 NAA30Q147X3 362 aaPredicted RBP12.28□□□□□ -0.44
USE1-207ENST00000596136 ABRAXAS2Q15018 415 aa12.28□□□□□ -0.44
USE1-207ENST00000596136 SETDB1Q15047 1291 aa12.28□□□□□ -0.44
USE1-207ENST00000596136 NSDHLQ15738 373 aa12.28□□□□□ -0.44
USE1-207ENST00000596136 UAP1Q16222 522 aaPredicted RBP12.28□□□□□ -0.44
USE1-207ENST00000596136 XKR6Q5GH73 641 aa12.28□□□□□ -0.44
USE1-207ENST00000596136 PAGE2BQ5JRK9 111 aa12.28□□□□□ -0.44
USE1-207ENST00000596136 B3GNTL1Q67FW5 361 aaPredicted RBP12.28□□□□□ -0.44
USE1-207ENST00000596136 METTL2BQ6P1Q9 378 aaKnown RBP12.28□□□□□ -0.44
USE1-207ENST00000596136 QSOX2Q6ZRP7 698 aa12.28□□□□□ -0.44
USE1-207ENST00000596136 IFT20Q8IY31 132 aa12.28□□□□□ -0.44
USE1-207ENST00000596136 LAS2Q8IYD9 372 aa12.28□□□□□ -0.44
USE1-207ENST00000596136 CA13Q8N1Q1 262 aa12.28□□□□□ -0.44
USE1-207ENST00000596136 EFCAB3Q8N7B9 438 aa12.28□□□□□ -0.44
USE1-207ENST00000596136 SNX31Q8N9S9 440 aa12.28□□□□□ -0.44
USE1-207ENST00000596136 DNAJB14Q8TBM8 379 aa12.28□□□□□ -0.44
USE1-207ENST00000596136 DCAKDQ8WVC6 231 aa12.28□□□□□ -0.44
USE1-207ENST00000596136 SNRNP40Q96DI7 357 aaKnown RBP12.28□□□□□ -0.44
USE1-207ENST00000596136 QRFPRQ96P65 431 aa12.28□□□□□ -0.44
USE1-207ENST00000596136 RNF32Q9H0A6 362 aa12.28□□□□□ -0.44
USE1-207ENST00000596136 LUZP4Q9P127 313 aa12.28□□□□□ -0.44
USE1-207ENST00000596136 NFU1Q9UMS0 254 aa12.28□□□□□ -0.44
USE1-207ENST00000596136 TSC22D4Q9Y3Q8 395 aa12.28□□□□□ -0.44
USE1-207ENST00000596136 CSAG2Q9Y5P2 127 aa12.28□□□□□ -0.44
USE1-207ENST00000596136 DOPEY2Q9Y3R5 2298 aa12.27□□□□□ -0.44
USE1-207ENST00000596136 HIVEP3Q5T1R4 2406 aa12.27□□□□□ -0.44
USE1-207ENST00000596136 A0A087WUV0 522 aaPredicted RBP12.27□□□□□ -0.45
USE1-207ENST00000596136 IGKV3D-11A0A0A0MRZ8 115 aa12.27□□□□□ -0.45
USE1-207ENST00000596136 IGHV3-20A0A0C4DH32 117 aa12.27□□□□□ -0.45
USE1-207ENST00000596136 KRT38O76015 456 aa12.27□□□□□ -0.45
USE1-207ENST00000596136 SEC24DO94855 1032 aaPredicted RBP12.27□□□□□ -0.45
USE1-207ENST00000596136 COL6A2P12110 1019 aa12.27□□□□□ -0.45
USE1-207ENST00000596136 ALDH18A1P54886 795 aaKnown RBP12.27□□□□□ -0.45
USE1-207ENST00000596136 OLR1P78380 273 aa12.27□□□□□ -0.45
USE1-207ENST00000596136 RUNX2Q13950 521 aa12.27□□□□□ -0.45
USE1-207ENST00000596136 PCBP2Q15366 365 aaKnown RBP eCLIP12.27□□□□□ -0.45
USE1-207ENST00000596136 TLR1Q15399 786 aa12.27□□□□□ -0.45
USE1-207ENST00000596136 EXT1Q16394 746 aa12.27□□□□□ -0.45
USE1-207ENST00000596136 HIST2H2ACQ16777 129 aaPredicted RBP12.27□□□□□ -0.45
USE1-207ENST00000596136 PRR30Q53SZ7 412 aaPredicted RBP12.27□□□□□ -0.45
USE1-207ENST00000596136 TECRLQ5HYJ1 363 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms