RNA–Protein interactions for RNA: ENST00000596014.5

PNKP-207, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PNKP, Length 1,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-207ENST00000596014 EFHD1Q9BUP0 239 aa18.33■□□□□ 0.52
PNKP-207ENST00000596014 TRPS1Q9UHF7 1281 aa18.33■□□□□ 0.52
PNKP-207ENST00000596014 KCND3Q9UK17 655 aa18.33■□□□□ 0.52
PNKP-207ENST00000596014 FARSAQ9Y285 508 aaKnown RBP18.33■□□□□ 0.52
PNKP-207ENST00000596014 H0YIG0 161 aa18.32■□□□□ 0.52
PNKP-207ENST00000596014 FFAR3O14843 346 aa18.32■□□□□ 0.52
PNKP-207ENST00000596014 GPR42O15529 346 aa18.32■□□□□ 0.52
PNKP-207ENST00000596014 DHRS4L1P0CG22 281 aa18.32■□□□□ 0.52
PNKP-207ENST00000596014 WT1P19544 449 aaPredicted RBP18.32■□□□□ 0.52
PNKP-207ENST00000596014 CCR10P46092 362 aa18.32■□□□□ 0.52
PNKP-207ENST00000596014 NEK2P51955 445 aa18.32■□□□□ 0.52
PNKP-207ENST00000596014 PKNOX1P55347 436 aa18.32■□□□□ 0.52
PNKP-207ENST00000596014 RAB8AP61006 207 aa18.32■□□□□ 0.52
PNKP-207ENST00000596014 NCF4Q15080 339 aa18.32■□□□□ 0.52
PNKP-207ENST00000596014 ARHGAP40Q5TG30 622 aa18.32■□□□□ 0.52
PNKP-207ENST00000596014 BROXQ5VW32 411 aa18.32■□□□□ 0.52
PNKP-207ENST00000596014 FRG2Q64ET8 278 aa18.32■□□□□ 0.52
PNKP-207ENST00000596014 MRPL14Q6P1L8 145 aaKnown RBP18.32■□□□□ 0.52
PNKP-207ENST00000596014 COX15Q7KZN9 410 aa18.32■□□□□ 0.52
PNKP-207ENST00000596014 OVCH1Q7RTY7 1134 aa18.32■□□□□ 0.52
PNKP-207ENST00000596014 RNF175Q8N4F7 328 aa18.32■□□□□ 0.52
PNKP-207ENST00000596014 ENDOVQ8N8Q3 282 aaKnown RBP18.32■□□□□ 0.52
PNKP-207ENST00000596014 FRG2BQ96QU4 278 aa18.32■□□□□ 0.52
PNKP-207ENST00000596014 F2RL3Q96RI0 385 aa18.32■□□□□ 0.52
PNKP-207ENST00000596014 CCT8L2Q96SF2 557 aa18.32■□□□□ 0.52
PNKP-207ENST00000596014 MS4A8Q9BY19 250 aa18.32■□□□□ 0.52
PNKP-207ENST00000596014 FAM117AQ9C073 453 aa18.32■□□□□ 0.52
PNKP-207ENST00000596014 REXO4Q9GZR2 422 aaKnown RBP18.32■□□□□ 0.52
PNKP-207ENST00000596014 PRM3Q9NNZ6 103 aa18.32■□□□□ 0.52
PNKP-207ENST00000596014 MID1IP1Q9NPA3 183 aa18.32■□□□□ 0.52
PNKP-207ENST00000596014 GPN3Q9UHW5 284 aaPredicted RBP18.32■□□□□ 0.52
PNKP-207ENST00000596014 NAALAD2Q9Y3Q0 740 aa18.32■□□□□ 0.52
PNKP-207ENST00000596014 PCDHGA6Q9Y5G7 932 aa18.32■□□□□ 0.52
PNKP-207ENST00000596014 C4orf51C9J302 202 aa18.31■□□□□ 0.52
PNKP-207ENST00000596014 GALR3O60755 368 aaPredicted RBP18.31■□□□□ 0.52
PNKP-207ENST00000596014 KLHL18O94889 574 aa18.31■□□□□ 0.52
PNKP-207ENST00000596014 ESRRBO95718 433 aa18.31■□□□□ 0.52
PNKP-207ENST00000596014 TGFB1P01137 390 aa18.31■□□□□ 0.52
PNKP-207ENST00000596014 FBLP22087 321 aaKnown RBP18.31■□□□□ 0.52
PNKP-207ENST00000596014 PTPN4P29074 926 aa18.31■□□□□ 0.52
PNKP-207ENST00000596014 SLC18A1P54219 525 aa18.31■□□□□ 0.52
PNKP-207ENST00000596014 DSG2Q14126 1118 aa18.31■□□□□ 0.52
PNKP-207ENST00000596014 ST3GAL2Q16842 350 aa18.31■□□□□ 0.52
PNKP-207ENST00000596014 DEFB134Q4QY38 66 aa18.31■□□□□ 0.52
PNKP-207ENST00000596014 NUDCD3Q8IVD9 361 aa18.31■□□□□ 0.52
PNKP-207ENST00000596014 CDYL2Q8N8U2 506 aa18.31■□□□□ 0.52
PNKP-207ENST00000596014 AMER3Q8N944 861 aa18.31■□□□□ 0.52
PNKP-207ENST00000596014 AGAP11Q8TF27 550 aa18.31■□□□□ 0.52
PNKP-207ENST00000596014 SREK1Q8WXA9 508 aaKnown RBP18.31■□□□□ 0.52
PNKP-207ENST00000596014 MTFMTQ96DP5 389 aaKnown RBP18.31■□□□□ 0.52
PNKP-207ENST00000596014 CMTM7Q96FZ5 175 aa18.31■□□□□ 0.52
PNKP-207ENST00000596014 CNDP1Q96KN2 507 aa18.31■□□□□ 0.52
PNKP-207ENST00000596014 DMRT3Q9NQL9 472 aa18.31■□□□□ 0.52
PNKP-207ENST00000596014 PRDM4Q9UKN5 801 aa18.31■□□□□ 0.52
PNKP-207ENST00000596014 MRPS18BQ9Y676 258 aaKnown RBP18.31■□□□□ 0.52
PNKP-207ENST00000596014 LOC400499M0QZD8 3231 aa18.31■□□□□ 0.52
PNKP-207ENST00000596014 WDR91A4D1P6 747 aa18.31■□□□□ 0.52
PNKP-207ENST00000596014 MAGEB17A8MXT2 336 aa18.31■□□□□ 0.52
PNKP-207ENST00000596014 SGK494L7N484 410 aa18.31■□□□□ 0.52
PNKP-207ENST00000596014 BIRC5O15392 142 aa18.31■□□□□ 0.52
PNKP-207ENST00000596014 B3GALT4O96024 378 aa18.31■□□□□ 0.52
PNKP-207ENST00000596014 ALBP02768 609 aa18.31■□□□□ 0.52
PNKP-207ENST00000596014 PHEXP78562 749 aa18.31■□□□□ 0.52
PNKP-207ENST00000596014 FAM219BQ5XKK7 198 aa18.31■□□□□ 0.52
PNKP-207ENST00000596014 CCDC81Q6ZN84 652 aa18.31■□□□□ 0.52
PNKP-207ENST00000596014 CHSY3Q70JA7 882 aa18.31■□□□□ 0.52
PNKP-207ENST00000596014 ANKRD42Q8N9B4 389 aa18.31■□□□□ 0.52
PNKP-207ENST00000596014 OR2L5Q8NG80 312 aa18.31■□□□□ 0.52
PNKP-207ENST00000596014 METTL6Q8TCB7 284 aa18.31■□□□□ 0.52
PNKP-207ENST00000596014 GAL3ST3Q96A11 431 aa18.31■□□□□ 0.52
PNKP-207ENST00000596014 FKBP10Q96AY3 582 aa18.31■□□□□ 0.52
PNKP-207ENST00000596014 SLC45A3Q96JT2 553 aa18.31■□□□□ 0.52
PNKP-207ENST00000596014 FAM107BQ9H098 131 aa18.31■□□□□ 0.52
PNKP-207ENST00000596014 SLC26A1Q9H2B4 701 aa18.31■□□□□ 0.52
PNKP-207ENST00000596014 ACTL8Q9H568 366 aa18.31■□□□□ 0.52
PNKP-207ENST00000596014 ELOVL6Q9H5J4 265 aa18.31■□□□□ 0.52
PNKP-207ENST00000596014 MLXIPLQ9NP71 852 aa18.31■□□□□ 0.52
PNKP-207ENST00000596014 SNX6Q9UNH7 406 aa18.31■□□□□ 0.52
PNKP-207ENST00000596014 FOXE1O00358 373 aaPredicted RBP18.3■□□□□ 0.52
PNKP-207ENST00000596014 ERI3O43414 337 aaKnown RBP18.3■□□□□ 0.52
PNKP-207ENST00000596014 CNOT3O75175 753 aaKnown RBP18.3■□□□□ 0.52
PNKP-207ENST00000596014 SH3BGRLO75368 114 aa18.3■□□□□ 0.52
PNKP-207ENST00000596014 CD63P08962 238 aa18.3■□□□□ 0.52
PNKP-207ENST00000596014 RPS18P62269 152 aaKnown RBP18.3■□□□□ 0.52
PNKP-207ENST00000596014 RPS13P62277 151 aaKnown RBP18.3■□□□□ 0.52
PNKP-207ENST00000596014 IFT88Q13099 833 aa18.3■□□□□ 0.52
PNKP-207ENST00000596014 C10orf62Q5T681 223 aaPredicted RBP18.3■□□□□ 0.52
PNKP-207ENST00000596014 DEPDC1Q5TB30 811 aa18.3■□□□□ 0.52
PNKP-207ENST00000596014 NIPAL1Q6NVV3 410 aa18.3■□□□□ 0.52
PNKP-207ENST00000596014 ZCCHC23Q6ZST2 131 aa18.3■□□□□ 0.52
PNKP-207ENST00000596014 OR6Y1Q8NGX8 325 aa18.3■□□□□ 0.52
PNKP-207ENST00000596014 MGARPQ8TDB4 240 aa18.3■□□□□ 0.52
PNKP-207ENST00000596014 CHMP6Q96FZ7 201 aa18.3■□□□□ 0.52
PNKP-207ENST00000596014 TRMOQ9BU70 441 aa18.3■□□□□ 0.52
PNKP-207ENST00000596014 OR51B5Q9H339 312 aa18.3■□□□□ 0.52
PNKP-207ENST00000596014 TRPC4Q9UBN4 977 aa18.3■□□□□ 0.52
PNKP-207ENST00000596014 CTSFQ9UBX1 484 aa18.3■□□□□ 0.52
PNKP-207ENST00000596014 TCFL5Q9UL49 500 aa18.3■□□□□ 0.52
PNKP-207ENST00000596014 MAP4K5Q9Y4K4 846 aa18.3■□□□□ 0.52
PNKP-207ENST00000596014 SCN2AQ99250 2005 aa18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms