RNA–Protein interactions for RNA: ENST00000594298.5

SHKBP1-203, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 716 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-203ENST00000594298 PRAP1Q96NZ9 151 aa16.55■□□□□ 0.24
SHKBP1-203ENST00000594298 DYRK1BQ9Y463 629 aa16.55■□□□□ 0.24
SHKBP1-203ENST00000594298 PCDHGB6Q9Y5F9 930 aa16.55■□□□□ 0.24
SHKBP1-203ENST00000594298 CSMD1Q96PZ7 3565 aa16.54■□□□□ 0.24
SHKBP1-203ENST00000594298 CCDC189A1A4V9 331 aa16.54■□□□□ 0.24
SHKBP1-203ENST00000594298 CCL21O00585 134 aa16.54■□□□□ 0.24
SHKBP1-203ENST00000594298 S100BP04271 92 aaPredicted RBP16.54■□□□□ 0.24
SHKBP1-203ENST00000594298 NPPBP16860 134 aa16.54■□□□□ 0.24
SHKBP1-203ENST00000594298 TYK2P29597 1187 aa16.54■□□□□ 0.24
SHKBP1-203ENST00000594298 SERPINB8P50452 374 aa16.54■□□□□ 0.24
SHKBP1-203ENST00000594298 RBPJQ06330 500 aa16.54■□□□□ 0.24
SHKBP1-203ENST00000594298 CPEB2Q7Z5Q1 589 aaKnown RBP16.54■□□□□ 0.24
SHKBP1-203ENST00000594298 MRGPRGQ86SM5 289 aa16.54■□□□□ 0.24
SHKBP1-203ENST00000594298 SPATA6LQ8N4H0 392 aa16.54■□□□□ 0.24
SHKBP1-203ENST00000594298 TBC1D19Q8N5T2 526 aa16.54■□□□□ 0.24
SHKBP1-203ENST00000594298 OR9A4Q8NGU2 314 aa16.54■□□□□ 0.24
SHKBP1-203ENST00000594298 STAG3L4Q8TBR4 150 aa16.54■□□□□ 0.24
SHKBP1-203ENST00000594298 KIAA1191Q96A73 305 aa16.54■□□□□ 0.24
SHKBP1-203ENST00000594298 THAP11Q96EK4 314 aa16.54■□□□□ 0.24
SHKBP1-203ENST00000594298 CHST11Q9NPF2 352 aa16.54■□□□□ 0.24
SHKBP1-203ENST00000594298 C19orf25Q9UFG5 118 aaPredicted RBP16.54■□□□□ 0.24
SHKBP1-203ENST00000594298 IKZF3Q9UKT9 509 aa16.54■□□□□ 0.24
SHKBP1-203ENST00000594298 CNTRLQ7Z7A1 2325 aa16.54■□□□□ 0.24
SHKBP1-203ENST00000594298 DIDO1Q9BTC0 2240 aaKnown RBP16.53■□□□□ 0.24
SHKBP1-203ENST00000594298 POC1B-GALNT4F8VUJ3 575 aa16.53■□□□□ 0.24
SHKBP1-203ENST00000594298 SEC24DO94855 1032 aaPredicted RBP16.53■□□□□ 0.24
SHKBP1-203ENST00000594298 LTA4HP09960 611 aaKnown RBP16.53■□□□□ 0.24
SHKBP1-203ENST00000594298 SLC35E2BP0CK96 405 aa16.53■□□□□ 0.24
SHKBP1-203ENST00000594298 CCR8P51685 355 aa16.53■□□□□ 0.24
SHKBP1-203ENST00000594298 RPS15AP62244 130 aaKnown RBP16.53■□□□□ 0.24
SHKBP1-203ENST00000594298 TGFBIQ15582 683 aa16.53■□□□□ 0.24
SHKBP1-203ENST00000594298 ZNF630Q2M218 657 aaPredicted RBP16.53■□□□□ 0.24
SHKBP1-203ENST00000594298 FAM83EQ2M2I3 478 aa16.53■□□□□ 0.24
SHKBP1-203ENST00000594298 VN1R4Q7Z5H5 301 aa16.53■□□□□ 0.24
SHKBP1-203ENST00000594298 CMC1Q7Z7K0 106 aa16.53■□□□□ 0.24
SHKBP1-203ENST00000594298 PLD3Q8IV08 490 aa16.53■□□□□ 0.24
SHKBP1-203ENST00000594298 AMER2Q8N7J2 671 aa16.53■□□□□ 0.24
SHKBP1-203ENST00000594298 LRRN4CLQ8ND94 238 aa16.53■□□□□ 0.24
SHKBP1-203ENST00000594298 PYCR2Q96C36 320 aa16.53■□□□□ 0.24
SHKBP1-203ENST00000594298 ZNF354BQ96LW1 612 aa16.53■□□□□ 0.24
SHKBP1-203ENST00000594298 PAFAH2Q99487 392 aa16.53■□□□□ 0.24
SHKBP1-203ENST00000594298 CCDC77Q9BR77 488 aa16.53■□□□□ 0.24
SHKBP1-203ENST00000594298 CAPS2Q9BXY5 557 aa16.53■□□□□ 0.24
SHKBP1-203ENST00000594298 CNOT10Q9H9A5 744 aaKnown RBP16.53■□□□□ 0.24
SHKBP1-203ENST00000594298 ZNF180Q9UJW8 692 aa16.53■□□□□ 0.24
SHKBP1-203ENST00000594298 RNF112Q9ULX5 631 aa16.53■□□□□ 0.24
SHKBP1-203ENST00000594298 KCNE2Q9Y6J6 123 aa16.53■□□□□ 0.24
SHKBP1-203ENST00000594298 EXOC1LA0A1B0GW35 172 aa16.52■□□□□ 0.24
SHKBP1-203ENST00000594298 C2P06681 752 aa16.52■□□□□ 0.24
SHKBP1-203ENST00000594298 POU3F2P20265 443 aaPredicted RBP16.52■□□□□ 0.24
SHKBP1-203ENST00000594298 HTR1EP28566 365 aa16.52■□□□□ 0.24
SHKBP1-203ENST00000594298 BCL6P41182 706 aa16.52■□□□□ 0.24
SHKBP1-203ENST00000594298 AGTR2P50052 363 aa16.52■□□□□ 0.24
SHKBP1-203ENST00000594298 CSNK1G2P78368 415 aa16.52■□□□□ 0.24
SHKBP1-203ENST00000594298 BMPR2Q13873 1038 aa16.52■□□□□ 0.24
SHKBP1-203ENST00000594298 BTBD16Q32M84 506 aa16.52■□□□□ 0.24
SHKBP1-203ENST00000594298 MINDY4Q4G0A6 757 aa16.52■□□□□ 0.24
SHKBP1-203ENST00000594298 ZNF766Q5HY98 468 aa16.52■□□□□ 0.24
SHKBP1-203ENST00000594298 ACER2Q5QJU3 275 aa16.52■□□□□ 0.24
SHKBP1-203ENST00000594298 SULT1C3Q6IMI6 304 aa16.52■□□□□ 0.24
SHKBP1-203ENST00000594298 TMEM214Q6NUQ4 689 aaKnown RBP16.52■□□□□ 0.24
SHKBP1-203ENST00000594298 KLC3Q6P597 504 aa16.52■□□□□ 0.24
SHKBP1-203ENST00000594298 XKRXQ6PP77 449 aa16.52■□□□□ 0.24
SHKBP1-203ENST00000594298 LANCL3Q6ZV70 420 aa16.52■□□□□ 0.24
SHKBP1-203ENST00000594298 PRSS41Q7RTY9 318 aa16.52■□□□□ 0.24
SHKBP1-203ENST00000594298 THOC6Q86W42 341 aaKnown RBP16.52■□□□□ 0.24
SHKBP1-203ENST00000594298 OR51Q1Q8NH59 317 aa16.52■□□□□ 0.24
SHKBP1-203ENST00000594298 UHMK1Q8TAS1 419 aaKnown RBP16.52■□□□□ 0.24
SHKBP1-203ENST00000594298 THAP3Q8WTV1 239 aaPredicted RBP16.52■□□□□ 0.24
SHKBP1-203ENST00000594298 SLC5A11Q8WWX8 675 aa16.52■□□□□ 0.24
SHKBP1-203ENST00000594298 PHF12Q96QT6 1004 aa16.52■□□□□ 0.24
SHKBP1-203ENST00000594298 SNX15Q9NRS6 342 aa16.52■□□□□ 0.24
SHKBP1-203ENST00000594298 CD274Q9NZQ7 290 aa16.52■□□□□ 0.24
SHKBP1-203ENST00000594298 ZGRF1Q86YA3 2104 aa16.52■□□□□ 0.23
SHKBP1-203ENST00000594298 CPAMD8Q8IZJ3 1885 aa16.52■□□□□ 0.23
SHKBP1-203ENST00000594298 A0A096LPK6 155 aa16.51■□□□□ 0.23
SHKBP1-203ENST00000594298 IGHV3-20A0A0C4DH32 117 aa16.51■□□□□ 0.23
SHKBP1-203ENST00000594298 A8MUI8 341 aa16.51■□□□□ 0.23
SHKBP1-203ENST00000594298 RIPK2O43353 540 aa16.51■□□□□ 0.23
SHKBP1-203ENST00000594298 SLC19A2O60779 497 aa16.51■□□□□ 0.23
SHKBP1-203ENST00000594298 SLU7O95391 586 aaKnown RBP16.51■□□□□ 0.23
SHKBP1-203ENST00000594298 CDH1P12830 882 aa16.51■□□□□ 0.23
SHKBP1-203ENST00000594298 TFEBP19484 476 aa16.51■□□□□ 0.23
SHKBP1-203ENST00000594298 AGAP20933 346 aa16.51■□□□□ 0.23
SHKBP1-203ENST00000594298 XCR1P46094 333 aa16.51■□□□□ 0.23
SHKBP1-203ENST00000594298 CASP6P55212 293 aa16.51■□□□□ 0.23
SHKBP1-203ENST00000594298 PMP22Q01453 160 aa16.51■□□□□ 0.23
SHKBP1-203ENST00000594298 EXT1Q16394 746 aa16.51■□□□□ 0.23
SHKBP1-203ENST00000594298 GDF7Q7Z4P5 450 aa16.51■□□□□ 0.23
SHKBP1-203ENST00000594298 ANKRD37Q7Z713 158 aa16.51■□□□□ 0.23
SHKBP1-203ENST00000594298 BEST3Q8N1M1 668 aa16.51■□□□□ 0.23
SHKBP1-203ENST00000594298 MDS2Q8NDY4 140 aa16.51■□□□□ 0.23
SHKBP1-203ENST00000594298 ABHD11Q8NFV4 315 aa16.51■□□□□ 0.23
SHKBP1-203ENST00000594298 M1APQ8TC57 530 aa16.51■□□□□ 0.23
SHKBP1-203ENST00000594298 RHBDF1Q96CC6 855 aa16.51■□□□□ 0.23
SHKBP1-203ENST00000594298 TM4SF19Q96DZ7 209 aa16.51■□□□□ 0.23
SHKBP1-203ENST00000594298 WWOXQ9NZC7 414 aa16.51■□□□□ 0.23
SHKBP1-203ENST00000594298 SLC22A14Q9Y267 594 aa16.51■□□□□ 0.23
SHKBP1-203ENST00000594298 HMX2A2RU54 273 aa16.5■□□□□ 0.23
SHKBP1-203ENST00000594298 NCF1BA6NI72 391 aaPredicted RBP16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms