RNA–Protein interactions for RNA: ENST00000594116.1

LTBP4-209, Transcript of latent transforming growth factor beta binding protein 4, humanhuman

TSL 3

Gene LTBP4, Length 420 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP4-209ENST00000594116 FAM60AQ9NP50 221 aa16.18■□□□□ 0.18
LTBP4-209ENST00000594116 MID1IP1Q9NPA3 183 aa16.18■□□□□ 0.18
LTBP4-209ENST00000594116 HAO1Q9UJM8 370 aa16.18■□□□□ 0.18
LTBP4-209ENST00000594116 SERTAD3Q9UJW9 196 aa16.18■□□□□ 0.18
LTBP4-209ENST00000594116 TCFL5Q9UL49 500 aa16.18■□□□□ 0.18
LTBP4-209ENST00000594116 RNF11Q9Y3C5 154 aa16.18■□□□□ 0.18
LTBP4-209ENST00000594116 H0YIV9 168 aa16.17■□□□□ 0.18
LTBP4-209ENST00000594116 LYPLA1O75608 230 aaPredicted RBP16.17■□□□□ 0.18
LTBP4-209ENST00000594116 OR4F21O95013 312 aa16.17■□□□□ 0.18
LTBP4-209ENST00000594116 ENO1P06733 434 aaKnown RBP16.17■□□□□ 0.18
LTBP4-209ENST00000594116 CAPN1P07384 714 aa16.17■□□□□ 0.18
LTBP4-209ENST00000594116 CXCR2P25025 360 aa16.17■□□□□ 0.18
LTBP4-209ENST00000594116 GRK3P35626 688 aa16.17■□□□□ 0.18
LTBP4-209ENST00000594116 MDH1P40925 334 aaKnown RBP16.17■□□□□ 0.18
LTBP4-209ENST00000594116 PGDP52209 483 aa16.17■□□□□ 0.18
LTBP4-209ENST00000594116 ITGA1P56199 1179 aa16.17■□□□□ 0.18
LTBP4-209ENST00000594116 OCRLQ01968 901 aa16.17■□□□□ 0.18
LTBP4-209ENST00000594116 MEF2AQ02078 507 aaPredicted RBP16.17■□□□□ 0.18
LTBP4-209ENST00000594116 SRSF1Q07955 248 aaKnown RBP eCLIP16.17■□□□□ 0.18
LTBP4-209ENST00000594116 FBXO42Q6P3S6 717 aa16.17■□□□□ 0.18
LTBP4-209ENST00000594116 FAM198BQ6UWH4 519 aa16.17■□□□□ 0.18
LTBP4-209ENST00000594116 ADCK2Q7Z695 626 aa16.17■□□□□ 0.18
LTBP4-209ENST00000594116 LAS2Q8IYD9 372 aa16.17■□□□□ 0.18
LTBP4-209ENST00000594116 KRT78Q8N1N4 520 aa16.17■□□□□ 0.18
LTBP4-209ENST00000594116 DNAJC22Q8N4W6 341 aa16.17■□□□□ 0.18
LTBP4-209ENST00000594116 ZNF740Q8NDX6 193 aa16.17■□□□□ 0.18
LTBP4-209ENST00000594116 LRRC8CQ8TDW0 803 aa16.17■□□□□ 0.18
LTBP4-209ENST00000594116 SLC25A23Q9BV35 468 aa16.17■□□□□ 0.18
LTBP4-209ENST00000594116 SLC29A3Q9BZD2 475 aa16.17■□□□□ 0.18
LTBP4-209ENST00000594116 CCDC134Q9H6E4 229 aa16.17■□□□□ 0.18
LTBP4-209ENST00000594116 ZNF395Q9H8N7 513 aaPredicted RBP16.17■□□□□ 0.18
LTBP4-209ENST00000594116 TNFRSF12AQ9NP84 129 aa16.17■□□□□ 0.18
LTBP4-209ENST00000594116 THAP1Q9NVV9 213 aa16.17■□□□□ 0.18
LTBP4-209ENST00000594116 EPB41L3Q9Y2J2 1087 aaPredicted RBP16.17■□□□□ 0.18
LTBP4-209ENST00000594116 TSC22D4Q9Y3Q8 395 aa16.17■□□□□ 0.18
LTBP4-209ENST00000594116 SPTBN1Q01082 2364 aaKnown RBP16.16■□□□□ 0.18
LTBP4-209ENST00000594116 ARGFXA6NJG6 315 aa16.16■□□□□ 0.18
LTBP4-209ENST00000594116 CEACAM4O75871 244 aa16.16■□□□□ 0.18
LTBP4-209ENST00000594116 HSPA4LO95757 839 aa16.16■□□□□ 0.18
LTBP4-209ENST00000594116 HBQ1P09105 142 aa16.16■□□□□ 0.18
LTBP4-209ENST00000594116 SCTRP47872 440 aa16.16■□□□□ 0.18
LTBP4-209ENST00000594116 MLLT10P55197 1068 aa16.16■□□□□ 0.18
LTBP4-209ENST00000594116 RPS15AP62244 130 aaKnown RBP16.16■□□□□ 0.18
LTBP4-209ENST00000594116 GUCY1A3Q02108 690 aa16.16■□□□□ 0.18
LTBP4-209ENST00000594116 CHAF1BQ13112 559 aa16.16■□□□□ 0.18
LTBP4-209ENST00000594116 ZC3H12BQ5HYM0 836 aaKnown RBP16.16■□□□□ 0.18
LTBP4-209ENST00000594116 TMIGD1Q6UXZ0 262 aa16.16■□□□□ 0.18
LTBP4-209ENST00000594116 ATCAYQ86WG3 371 aa16.16■□□□□ 0.18
LTBP4-209ENST00000594116 MFSD9Q8NBP5 474 aa16.16■□□□□ 0.18
LTBP4-209ENST00000594116 UBE2E3Q969T4 207 aa16.16■□□□□ 0.18
LTBP4-209ENST00000594116 THAP11Q96EK4 314 aa16.16■□□□□ 0.18
LTBP4-209ENST00000594116 OR2A5Q96R48 311 aa16.16■□□□□ 0.18
LTBP4-209ENST00000594116 ZFYVE21Q9BQ24 234 aa16.16■□□□□ 0.18
LTBP4-209ENST00000594116 SYNPO2LQ9H987 977 aa16.16■□□□□ 0.18
LTBP4-209ENST00000594116 ENAMQ9NRM1 1142 aa16.16■□□□□ 0.18
LTBP4-209ENST00000594116 ZNF490Q9ULM2 529 aaPredicted RBP16.16■□□□□ 0.18
LTBP4-209ENST00000594116 RAP2CQ9Y3L5 183 aa16.16■□□□□ 0.18
LTBP4-209ENST00000594116 FEZF1A0PJY2 475 aa16.15■□□□□ 0.18
LTBP4-209ENST00000594116 LCMT2O60294 686 aaKnown RBP16.15■□□□□ 0.18
LTBP4-209ENST00000594116 UTP20O75691 2785 aaKnown RBP16.15■□□□□ 0.18
LTBP4-209ENST00000594116 FGF4P08620 206 aa16.15■□□□□ 0.18
LTBP4-209ENST00000594116 GSTM2P28161 218 aa16.15■□□□□ 0.18
LTBP4-209ENST00000594116 ARL1P40616 181 aaPredicted RBP16.15■□□□□ 0.18
LTBP4-209ENST00000594116 BCL6P41182 706 aa16.15■□□□□ 0.18
LTBP4-209ENST00000594116 NCF4Q15080 339 aa16.15■□□□□ 0.18
LTBP4-209ENST00000594116 ZRSR2Q15696 482 aaKnown RBP16.15■□□□□ 0.18
LTBP4-209ENST00000594116 CPSF6Q16630 551 aaKnown RBP eCLIP16.15■□□□□ 0.18
LTBP4-209ENST00000594116 HIST2H2ACQ16777 129 aaPredicted RBP16.15■□□□□ 0.18
LTBP4-209ENST00000594116 ZNF385CQ66K41 422 aaPredicted RBP16.15■□□□□ 0.18
LTBP4-209ENST00000594116 HIST2H2AA3Q6FI13 130 aa16.15■□□□□ 0.18
LTBP4-209ENST00000594116 MED27Q6P2C8 311 aa16.15■□□□□ 0.18
LTBP4-209ENST00000594116 PLD3Q8IV08 490 aa16.15■□□□□ 0.18
LTBP4-209ENST00000594116 HOMEZQ8IX15 550 aa16.15■□□□□ 0.18
LTBP4-209ENST00000594116 GPR135Q8IZ08 494 aa16.15■□□□□ 0.18
LTBP4-209ENST00000594116 TBC1D19Q8N5T2 526 aa16.15■□□□□ 0.18
LTBP4-209ENST00000594116 CDYL2Q8N8U2 506 aa16.15■□□□□ 0.18
LTBP4-209ENST00000594116 ANKRD53Q8N9V6 530 aa16.15■□□□□ 0.18
LTBP4-209ENST00000594116 WDR20Q8TBZ3 569 aa16.15■□□□□ 0.18
LTBP4-209ENST00000594116 SEC16BQ96JE7 1060 aa16.15■□□□□ 0.18
LTBP4-209ENST00000594116 C7orf26Q96N11 449 aa16.15■□□□□ 0.18
LTBP4-209ENST00000594116 ZNF285Q96NJ3 590 aa16.15■□□□□ 0.18
LTBP4-209ENST00000594116 SHCBP1LQ9BZQ2 653 aa16.15■□□□□ 0.18
LTBP4-209ENST00000594116 SLC7A5P2Q9GIP4 190 aa16.15■□□□□ 0.18
LTBP4-209ENST00000594116 RHBGQ9H310 441 aa16.15■□□□□ 0.18
LTBP4-209ENST00000594116 PCDHGB7Q9Y5F8 929 aa16.15■□□□□ 0.18
LTBP4-209ENST00000594116 PCDHGA11Q9Y5H2 935 aa16.15■□□□□ 0.18
LTBP4-209ENST00000594116 A0A0J9YVX5 310 aa16.14■□□□□ 0.17
LTBP4-209ENST00000594116 C9J4A7 227 aa16.14■□□□□ 0.17
LTBP4-209ENST00000594116 H3BMH7 237 aa16.14■□□□□ 0.17
LTBP4-209ENST00000594116 AZIN1O14977 448 aa16.14■□□□□ 0.17
LTBP4-209ENST00000594116 ZNF749O43361 778 aa16.14■□□□□ 0.17
LTBP4-209ENST00000594116 HCRTR1O43613 425 aa16.14■□□□□ 0.17
LTBP4-209ENST00000594116 OR1F1O43749 312 aa16.14■□□□□ 0.17
LTBP4-209ENST00000594116 AHRP35869 848 aa16.14■□□□□ 0.17
LTBP4-209ENST00000594116 CCL11P51671 97 aa16.14■□□□□ 0.17
LTBP4-209ENST00000594116 FOXA1P55317 472 aa16.14■□□□□ 0.17
LTBP4-209ENST00000594116 C10orf62Q5T681 223 aaPredicted RBP16.14■□□□□ 0.17
LTBP4-209ENST00000594116 FAM219BQ5XKK7 198 aa16.14■□□□□ 0.17
LTBP4-209ENST00000594116 KANK2Q63ZY3 851 aa16.14■□□□□ 0.17
LTBP4-209ENST00000594116 RNF165Q6ZSG1 346 aa16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms