RNA–Protein interactions for RNA: ENST00000593168.5

VMP1-217, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-217ENST00000593168 PILRAQ9UKJ1 303 aa12.85□□□□□ -0.35
VMP1-217ENST00000593168 MAPRE3Q9UPY8 281 aa12.85□□□□□ -0.35
VMP1-217ENST00000593168 KLHL20Q9Y2M5 609 aa12.85□□□□□ -0.35
VMP1-217ENST00000593168 WBP11Q9Y2W2 641 aaKnown RBP12.85□□□□□ -0.35
VMP1-217ENST00000593168 NDUFAF1Q9Y375 327 aa12.85□□□□□ -0.35
VMP1-217ENST00000593168 RNF215Q9Y6U7 377 aa12.85□□□□□ -0.35
VMP1-217ENST00000593168 ASH1LQ9NR48 2969 aaKnown RBP12.85□□□□□ -0.35
VMP1-217ENST00000593168 ARID1BQ8NFD5 2236 aaPredicted RBP12.85□□□□□ -0.35
VMP1-217ENST00000593168 A0A1W2PP18 115 aa12.84□□□□□ -0.35
VMP1-217ENST00000593168 LRIT2A6NDA9 550 aa12.84□□□□□ -0.35
VMP1-217ENST00000593168 ANKRD65E5RJM6 399 aa12.84□□□□□ -0.35
VMP1-217ENST00000593168 NR5A2O00482 541 aa12.84□□□□□ -0.35
VMP1-217ENST00000593168 GSC2O15499 205 aa12.84□□□□□ -0.35
VMP1-217ENST00000593168 SH3BGRLO75368 114 aa12.84□□□□□ -0.35
VMP1-217ENST00000593168 C1QL1O75973 258 aa12.84□□□□□ -0.35
VMP1-217ENST00000593168 KRT16P08779 473 aa12.84□□□□□ -0.35
VMP1-217ENST00000593168 PNLIPP16233 465 aa12.84□□□□□ -0.35
VMP1-217ENST00000593168 IL12AP29459 219 aa12.84□□□□□ -0.35
VMP1-217ENST00000593168 CPOXP36551 454 aa12.84□□□□□ -0.35
VMP1-217ENST00000593168 ASMTP46597 345 aa12.84□□□□□ -0.35
VMP1-217ENST00000593168 LSSP48449 732 aa12.84□□□□□ -0.35
VMP1-217ENST00000593168 CLNS1AP54105 237 aaKnown RBP12.84□□□□□ -0.35
VMP1-217ENST00000593168 CORO7P57737 925 aa12.84□□□□□ -0.35
VMP1-217ENST00000593168 C21orf58P58505 322 aa12.84□□□□□ -0.35
VMP1-217ENST00000593168 CYP4F2P78329 520 aa12.84□□□□□ -0.35
VMP1-217ENST00000593168 MXRA7P84157 204 aa12.84□□□□□ -0.35
VMP1-217ENST00000593168 ART3Q13508 389 aa12.84□□□□□ -0.35
VMP1-217ENST00000593168 SUZ12Q15022 739 aaKnown RBP12.84□□□□□ -0.35
VMP1-217ENST00000593168 ADPRMQ3LIE5 342 aa12.84□□□□□ -0.35
VMP1-217ENST00000593168 CCDC157Q569K6 752 aa12.84□□□□□ -0.35
VMP1-217ENST00000593168 DHRS13Q6UX07 377 aa12.84□□□□□ -0.35
VMP1-217ENST00000593168 HACD2Q6Y1H2 254 aa12.84□□□□□ -0.35
VMP1-217ENST00000593168 GATAD2AQ86YP4 633 aa12.84□□□□□ -0.35
VMP1-217ENST00000593168 PCYOX1LQ8NBM8 494 aa12.84□□□□□ -0.35
VMP1-217ENST00000593168 OR4C6Q8NH72 309 aa12.84□□□□□ -0.35
VMP1-217ENST00000593168 RGMAQ96B86 450 aa12.84□□□□□ -0.35
VMP1-217ENST00000593168 RCN3Q96D15 328 aa12.84□□□□□ -0.35
VMP1-217ENST00000593168 TMEM74Q96NL1 305 aa12.84□□□□□ -0.35
VMP1-217ENST00000593168 QRFPRQ96P65 431 aa12.84□□□□□ -0.35
VMP1-217ENST00000593168 DCBLD2Q96PD2 775 aa12.84□□□□□ -0.35
VMP1-217ENST00000593168 OR2A5Q96R48 311 aa12.84□□□□□ -0.35
VMP1-217ENST00000593168 UBL7Q96S82 380 aaPredicted RBP12.84□□□□□ -0.35
VMP1-217ENST00000593168 C1GALT1Q9NS00 363 aa12.84□□□□□ -0.35
VMP1-217ENST00000593168 EVA1BQ9NVM1 165 aa12.84□□□□□ -0.35
VMP1-217ENST00000593168 NDE1Q9NXR1 346 aa12.84□□□□□ -0.35
VMP1-217ENST00000593168 BAIAP2L1Q9UHR4 511 aa12.84□□□□□ -0.35
VMP1-217ENST00000593168 MCM8Q9UJA3 840 aa12.84□□□□□ -0.35
VMP1-217ENST00000593168 PADI4Q9UM07 663 aa12.84□□□□□ -0.35
VMP1-217ENST00000593168 COL5A1P20908 1838 aaPredicted RBP12.83□□□□□ -0.35
VMP1-217ENST00000593168 TRIM38O00635 465 aa12.83□□□□□ -0.36
VMP1-217ENST00000593168 FBP2O00757 339 aa12.83□□□□□ -0.36
VMP1-217ENST00000593168 AIM2O14862 343 aa12.83□□□□□ -0.36
VMP1-217ENST00000593168 ANGPT2O15123 496 aa12.83□□□□□ -0.36
VMP1-217ENST00000593168 CFLARO15519 480 aa12.83□□□□□ -0.36
VMP1-217ENST00000593168 NDUFS4O43181 175 aa12.83□□□□□ -0.36
VMP1-217ENST00000593168 PCDH7O60245 1069 aa12.83□□□□□ -0.36
VMP1-217ENST00000593168 PCDHGA12O60330 932 aa12.83□□□□□ -0.36
VMP1-217ENST00000593168 IL6P05231 212 aa12.83□□□□□ -0.36
VMP1-217ENST00000593168 ANXA4P09525 319 aaPredicted RBP12.83□□□□□ -0.36
VMP1-217ENST00000593168 CAPN3P20807 821 aa12.83□□□□□ -0.36
VMP1-217ENST00000593168 PRPS1L1P21108 318 aa12.83□□□□□ -0.36
VMP1-217ENST00000593168 TACR1P25103 407 aa12.83□□□□□ -0.36
VMP1-217ENST00000593168 ITPKBP27987 946 aa12.83□□□□□ -0.36
VMP1-217ENST00000593168 GPLD1P80108 840 aa12.83□□□□□ -0.36
VMP1-217ENST00000593168 PWP1Q13610 501 aa12.83□□□□□ -0.36
VMP1-217ENST00000593168 MMEL1Q495T6 779 aa12.83□□□□□ -0.36
VMP1-217ENST00000593168 PAGE2Q7Z2X7 111 aa12.83□□□□□ -0.36
VMP1-217ENST00000593168 COMMD6Q7Z4G1 85 aa12.83□□□□□ -0.36
VMP1-217ENST00000593168 VN1R4Q7Z5H5 301 aa12.83□□□□□ -0.36
VMP1-217ENST00000593168 ASPGQ86U10 573 aa12.83□□□□□ -0.36
VMP1-217ENST00000593168 RIMKLAQ8IXN7 391 aa12.83□□□□□ -0.36
VMP1-217ENST00000593168 KIF2BQ8N4N8 673 aa12.83□□□□□ -0.36
VMP1-217ENST00000593168 SRFBP1Q8NEF9 429 aaKnown RBP12.83□□□□□ -0.36
VMP1-217ENST00000593168 FBXO27Q8NI29 283 aa12.83□□□□□ -0.36
VMP1-217ENST00000593168 NT5CQ8TCD5 201 aa12.83□□□□□ -0.36
VMP1-217ENST00000593168 SLC13A3Q8WWT9 602 aa12.83□□□□□ -0.36
VMP1-217ENST00000593168 STARD8Q92502 1023 aa12.83□□□□□ -0.36
VMP1-217ENST00000593168 TM4SF19Q96DZ7 209 aa12.83□□□□□ -0.36
VMP1-217ENST00000593168 TSSK3Q96PN8 268 aa12.83□□□□□ -0.36
VMP1-217ENST00000593168 TRAPPC9Q96Q05 1148 aa12.83□□□□□ -0.36
VMP1-217ENST00000593168 F2RL3Q96RI0 385 aa12.83□□□□□ -0.36
VMP1-217ENST00000593168 CD180Q99467 661 aa12.83□□□□□ -0.36
VMP1-217ENST00000593168 ZFYVE21Q9BQ24 234 aa12.83□□□□□ -0.36
VMP1-217ENST00000593168 MMADHCQ9H3L0 296 aaPredicted RBP12.83□□□□□ -0.36
VMP1-217ENST00000593168 CLMPQ9H6B4 373 aa12.83□□□□□ -0.36
VMP1-217ENST00000593168 ADAM29Q9UKF5 820 aa12.83□□□□□ -0.36
VMP1-217ENST00000593168 RRP15Q9Y3B9 282 aaKnown RBP12.83□□□□□ -0.36
VMP1-217ENST00000593168 KALRNO60229 2985 aa12.83□□□□□ -0.36
VMP1-217ENST00000593168 IGHV1OR21-1A0A087WYE8 117 aa12.82□□□□□ -0.36
VMP1-217ENST00000593168 CCDC154A6NI56 674 aa12.82□□□□□ -0.36
VMP1-217ENST00000593168 SAP18O00422 153 aaKnown RBP12.82□□□□□ -0.36
VMP1-217ENST00000593168 PLPP1O14494 284 aa12.82□□□□□ -0.36
VMP1-217ENST00000593168 MRASO14807 208 aa12.82□□□□□ -0.36
VMP1-217ENST00000593168 B4GAT1O43505 415 aa12.82□□□□□ -0.36
VMP1-217ENST00000593168 CTSVO60911 334 aa12.82□□□□□ -0.36
VMP1-217ENST00000593168 EEDO75530 441 aaKnown RBP12.82□□□□□ -0.36
VMP1-217ENST00000593168 SERPIND1P05546 499 aa12.82□□□□□ -0.36
VMP1-217ENST00000593168 KLK1P06870 262 aa12.82□□□□□ -0.36
VMP1-217ENST00000593168 PVRP15151 417 aa12.82□□□□□ -0.36
VMP1-217ENST00000593168 NQO1P15559 274 aaKnown RBP12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 79.8 ms