RNA–Protein interactions for RNA: ENST00000593104.5

PRKCSH-220, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 4

Gene PRKCSH, Length 545 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-220ENST00000593104 CAPN3P20807 821 aa10.46□□□□□ -0.73
PRKCSH-220ENST00000593104 GABRB3P28472 473 aa10.46□□□□□ -0.73
PRKCSH-220ENST00000593104 HLCSP50747 726 aa10.46□□□□□ -0.73
PRKCSH-220ENST00000593104 HNRNPFP52597 415 aaKnown RBP10.46□□□□□ -0.73
PRKCSH-220ENST00000593104 NUP107P57740 925 aa10.46□□□□□ -0.73
PRKCSH-220ENST00000593104 DHX9Q08211 1270 aaKnown RBP10.46□□□□□ -0.73
PRKCSH-220ENST00000593104 LCTLQ6UWM7 567 aa10.46□□□□□ -0.73
PRKCSH-220ENST00000593104 RNF10Q8N5U6 811 aaKnown RBP10.46□□□□□ -0.73
PRKCSH-220ENST00000593104 HORMAD2Q8N7B1 307 aa10.46□□□□□ -0.73
PRKCSH-220ENST00000593104 ANKRD53Q8N9V6 530 aa10.46□□□□□ -0.73
PRKCSH-220ENST00000593104 TMEM52Q8NDY8 209 aa10.46□□□□□ -0.73
PRKCSH-220ENST00000593104 OR5M9Q8NGP3 310 aa10.46□□□□□ -0.73
PRKCSH-220ENST00000593104 UTP15Q8TED0 518 aaKnown RBP10.46□□□□□ -0.73
PRKCSH-220ENST00000593104 THAP11Q96EK4 314 aa10.46□□□□□ -0.73
PRKCSH-220ENST00000593104 SNF8Q96H20 258 aa10.46□□□□□ -0.73
PRKCSH-220ENST00000593104 SEC16BQ96JE7 1060 aa10.46□□□□□ -0.73
PRKCSH-220ENST00000593104 PDLIM2Q96JY6 352 aa10.46□□□□□ -0.73
PRKCSH-220ENST00000593104 OLFM1Q99784 485 aa10.46□□□□□ -0.73
PRKCSH-220ENST00000593104 PNO1Q9NRX1 252 aaKnown RBP10.46□□□□□ -0.73
PRKCSH-220ENST00000593104 KCMF1Q9P0J7 381 aa10.46□□□□□ -0.73
PRKCSH-220ENST00000593104 FBXW2Q9UKT8 454 aa10.46□□□□□ -0.73
PRKCSH-220ENST00000593104 DNAJC13O75165 2243 aa10.45□□□□□ -0.74
PRKCSH-220ENST00000593104 PHF3Q92576 2039 aaKnown RBP10.45□□□□□ -0.74
PRKCSH-220ENST00000593104 IGKV3D-11A0A0A0MRZ8 115 aa10.45□□□□□ -0.74
PRKCSH-220ENST00000593104 TCRBV16S1A1N1A0A5B0 115 aa10.45□□□□□ -0.74
PRKCSH-220ENST00000593104 SDR42E2A6NKP2 422 aa10.45□□□□□ -0.74
PRKCSH-220ENST00000593104 NPIPA2E9PIF3 369 aa10.45□□□□□ -0.74
PRKCSH-220ENST00000593104 NPIPA3F8WFD2 350 aa10.45□□□□□ -0.74
PRKCSH-220ENST00000593104 AP3B1O00203 1094 aa10.45□□□□□ -0.74
PRKCSH-220ENST00000593104 NRDCO43847 1150 aa10.45□□□□□ -0.74
PRKCSH-220ENST00000593104 ITGA10O75578 1167 aa10.45□□□□□ -0.74
PRKCSH-220ENST00000593104 HRH2P25021 359 aa10.45□□□□□ -0.74
PRKCSH-220ENST00000593104 GRK3P35626 688 aa10.45□□□□□ -0.74
PRKCSH-220ENST00000593104 MAGEA6P43360 314 aa10.45□□□□□ -0.74
PRKCSH-220ENST00000593104 CCR8P51685 355 aa10.45□□□□□ -0.74
PRKCSH-220ENST00000593104 IST1P53990 364 aa10.45□□□□□ -0.74
PRKCSH-220ENST00000593104 CDK16Q00536 496 aa10.45□□□□□ -0.74
PRKCSH-220ENST00000593104 PMPCAQ10713 525 aa10.45□□□□□ -0.74
PRKCSH-220ENST00000593104 HERC3Q15034 1050 aa10.45□□□□□ -0.74
PRKCSH-220ENST00000593104 C18orf21Q32NC0 220 aaPredicted RBP10.45□□□□□ -0.74
PRKCSH-220ENST00000593104 CLNKQ7Z7G1 428 aa10.45□□□□□ -0.74
PRKCSH-220ENST00000593104 LGI4Q8N135 537 aa10.45□□□□□ -0.74
PRKCSH-220ENST00000593104 CYP4Z2PQ8N1L4 340 aa10.45□□□□□ -0.74
PRKCSH-220ENST00000593104 CA13Q8N1Q1 262 aa10.45□□□□□ -0.74
PRKCSH-220ENST00000593104 APCDD1LQ8NCL9 501 aa10.45□□□□□ -0.74
PRKCSH-220ENST00000593104 NEIL2Q969S2 332 aa10.45□□□□□ -0.74
PRKCSH-220ENST00000593104 TMEM125Q96AQ2 219 aa10.45□□□□□ -0.74
PRKCSH-220ENST00000593104 MS4A14Q96JA4 679 aa10.45□□□□□ -0.74
PRKCSH-220ENST00000593104 SIGLEC10Q96LC7 697 aa10.45□□□□□ -0.74
PRKCSH-220ENST00000593104 DEFB126Q9BYW3 111 aa10.45□□□□□ -0.74
PRKCSH-220ENST00000593104 TRIM45Q9H8W5 580 aaPredicted RBP10.45□□□□□ -0.74
PRKCSH-220ENST00000593104 PARVBQ9HBI1 364 aa10.45□□□□□ -0.74
PRKCSH-220ENST00000593104 PNPLA3Q9NST1 481 aa10.45□□□□□ -0.74
PRKCSH-220ENST00000593104 ZFATQ9P243 1243 aa10.45□□□□□ -0.74
PRKCSH-220ENST00000593104 KLHL42Q9P2K6 505 aa10.45□□□□□ -0.74
PRKCSH-220ENST00000593104 VPS9D1Q9Y2B5 631 aa10.45□□□□□ -0.74
PRKCSH-220ENST00000593104 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP10.44□□□□□ -0.74
PRKCSH-220ENST00000593104 TRBC2A0A5B9 178 aa10.44□□□□□ -0.74
PRKCSH-220ENST00000593104 FANCGO15287 622 aa10.44□□□□□ -0.74
PRKCSH-220ENST00000593104 C8GP07360 202 aa10.44□□□□□ -0.74
PRKCSH-220ENST00000593104 HOXB4P17483 251 aaPredicted RBP10.44□□□□□ -0.74
PRKCSH-220ENST00000593104 JAK1P23458 1154 aa10.44□□□□□ -0.74
PRKCSH-220ENST00000593104 MSX1P28360 303 aa10.44□□□□□ -0.74
PRKCSH-220ENST00000593104 DNAJA1P31689 397 aaKnown RBP10.44□□□□□ -0.74
PRKCSH-220ENST00000593104 TRHRP34981 398 aaPredicted RBP10.44□□□□□ -0.74
PRKCSH-220ENST00000593104 SCTRP47872 440 aa10.44□□□□□ -0.74
PRKCSH-220ENST00000593104 RUNX2Q13950 521 aa10.44□□□□□ -0.74
PRKCSH-220ENST00000593104 XKR6Q5GH73 641 aa10.44□□□□□ -0.74
PRKCSH-220ENST00000593104 TOR1AIP1Q5JTV8 583 aa10.44□□□□□ -0.74
PRKCSH-220ENST00000593104 HP1BP3Q5SSJ5 553 aaPredicted RBP10.44□□□□□ -0.74
PRKCSH-220ENST00000593104 UGT3A1Q6NUS8 523 aa10.44□□□□□ -0.74
PRKCSH-220ENST00000593104 C4orf22Q6V702 233 aa10.44□□□□□ -0.74
PRKCSH-220ENST00000593104 QSOX2Q6ZRP7 698 aa10.44□□□□□ -0.74
PRKCSH-220ENST00000593104 TMPRSS11BQ86T26 416 aa10.44□□□□□ -0.74
PRKCSH-220ENST00000593104 LIX1LQ8IVB5 337 aa10.44□□□□□ -0.74
PRKCSH-220ENST00000593104 DMRTC2Q8IXT2 367 aaPredicted RBP10.44□□□□□ -0.74
PRKCSH-220ENST00000593104 MMP21Q8N119 569 aa10.44□□□□□ -0.74
PRKCSH-220ENST00000593104 MYO1HQ8N1T3 1032 aa10.44□□□□□ -0.74
PRKCSH-220ENST00000593104 TMEM156Q8N614 296 aa10.44□□□□□ -0.74
PRKCSH-220ENST00000593104 ZNF321PQ8N8H1 164 aa10.44□□□□□ -0.74
PRKCSH-220ENST00000593104 C2CD4AQ8NCU7 369 aaPredicted RBP10.44□□□□□ -0.74
PRKCSH-220ENST00000593104 ABHD11Q8NFV4 315 aa10.44□□□□□ -0.74
PRKCSH-220ENST00000593104 OR4K1Q8NGD4 311 aa10.44□□□□□ -0.74
PRKCSH-220ENST00000593104 LILRB4Q8NHJ6 448 aa10.44□□□□□ -0.74
PRKCSH-220ENST00000593104 NT5CQ8TCD5 201 aa10.44□□□□□ -0.74
PRKCSH-220ENST00000593104 RND1Q92730 232 aa10.44□□□□□ -0.74
PRKCSH-220ENST00000593104 NCLNQ969V3 563 aa10.44□□□□□ -0.74
PRKCSH-220ENST00000593104 PWWP2AQ96N64 755 aa10.44□□□□□ -0.74
PRKCSH-220ENST00000593104 ZNF559Q9BR84 538 aa10.44□□□□□ -0.74
PRKCSH-220ENST00000593104 PCBD2Q9H0N5 130 aa10.44□□□□□ -0.74
PRKCSH-220ENST00000593104 GSX1Q9H4S2 264 aaPredicted RBP10.44□□□□□ -0.74
PRKCSH-220ENST00000593104 ARL15Q9NXU5 204 aa10.44□□□□□ -0.74
PRKCSH-220ENST00000593104 KLF13Q9Y2Y9 288 aaPredicted RBP10.44□□□□□ -0.74
PRKCSH-220ENST00000593104 CLDN16Q9Y5I7 305 aa10.44□□□□□ -0.74
PRKCSH-220ENST00000593104 NCKAP5O14513 1909 aa10.43□□□□□ -0.74
PRKCSH-220ENST00000593104 TMEM200CA6NKL6 621 aa10.43□□□□□ -0.74
PRKCSH-220ENST00000593104 WWP2O00308 870 aa10.43□□□□□ -0.74
PRKCSH-220ENST00000593104 FCHO1O14526 889 aa10.43□□□□□ -0.74
PRKCSH-220ENST00000593104 ZNF354AO60765 605 aaPredicted RBP10.43□□□□□ -0.74
PRKCSH-220ENST00000593104 OR6B1O95007 311 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms