RNA–Protein interactions for RNA: ENST00000592546.5

RFX2-222, Transcript of regulatory factor X2, human

APPRIS ALT1 TSL 2 BASIC

Gene RFX2, Length 2,578 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RFX2-222	ENST00000592546	SLC29A3	Q9BZD2	475 aa		13.9	□□□□□ -0.18
RFX2-222	ENST00000592546	FAM83D	Q9H4H8	585 aa		13.9	□□□□□ -0.18
RFX2-222	ENST00000592546	CNOT2	Q9NZN8	540 aa	Known RBP	13.9	□□□□□ -0.18
RFX2-222	ENST00000592546	CMAHP	Q9Y471	501 aa		13.9	□□□□□ -0.18
RFX2-222	ENST00000592546	CHD5	Q8TDI0	1954 aa		13.9	□□□□□ -0.19
RFX2-222	ENST00000592546	IQCM	A0A1B0GVH7	501 aa		13.89	□□□□□ -0.19
RFX2-222	ENST00000592546	MEN1	O00255	615 aa		13.89	□□□□□ -0.19
RFX2-222	ENST00000592546	FPGT	O14772	594 aa		13.89	□□□□□ -0.19
RFX2-222	ENST00000592546	NOS1AP	O75052	506 aa	Predicted RBP	13.89	□□□□□ -0.19
RFX2-222	ENST00000592546	FKTN	O75072	461 aa		13.89	□□□□□ -0.19
RFX2-222	ENST00000592546	ARHGEF15	O94989	841 aa		13.89	□□□□□ -0.19
RFX2-222	ENST00000592546	PDYN	P01213	254 aa		13.89	□□□□□ -0.19
RFX2-222	ENST00000592546	C1QB	P02746	253 aa		13.89	□□□□□ -0.19
RFX2-222	ENST00000592546	SCG5	P05408	212 aa		13.89	□□□□□ -0.19
RFX2-222	ENST00000592546	ANXA8	P13928	327 aa		13.89	□□□□□ -0.19
RFX2-222	ENST00000592546	CBL	P22681	906 aa		13.89	□□□□□ -0.19
RFX2-222	ENST00000592546	KIR3DL1	P43629	444 aa		13.89	□□□□□ -0.19
RFX2-222	ENST00000592546	CDH4	P55283	916 aa		13.89	□□□□□ -0.19
RFX2-222	ENST00000592546	SMARCB1	Q12824	385 aa		13.89	□□□□□ -0.19
RFX2-222	ENST00000592546	ABR	Q12979	859 aa		13.89	□□□□□ -0.19
RFX2-222	ENST00000592546	MTAP	Q13126	283 aa		13.89	□□□□□ -0.19
RFX2-222	ENST00000592546	TCTN1	Q2MV58	587 aa		13.89	□□□□□ -0.19
RFX2-222	ENST00000592546	PAMR1	Q6UXH9	720 aa		13.89	□□□□□ -0.19
RFX2-222	ENST00000592546	SYNPO	Q8N3V7	929 aa		13.89	□□□□□ -0.19
RFX2-222	ENST00000592546	SLAIN1	Q8ND83	568 aa		13.89	□□□□□ -0.19
RFX2-222	ENST00000592546	WDR36	Q8NI36	951 aa	Known RBP	13.89	□□□□□ -0.19
RFX2-222	ENST00000592546	APOL5	Q9BWW9	433 aa		13.89	□□□□□ -0.19
RFX2-222	ENST00000592546	FAM126A	Q9BYI3	521 aa	Predicted RBP	13.89	□□□□□ -0.19
RFX2-222	ENST00000592546	SNTG1	Q9NSN8	517 aa		13.89	□□□□□ -0.19
RFX2-222	ENST00000592546	TMPRSS11E	Q9UL52	423 aa		13.89	□□□□□ -0.19
RFX2-222	ENST00000592546	RAI2	Q9Y5P3	530 aa		13.89	□□□□□ -0.19
RFX2-222	ENST00000592546	LAMA2	P24043	3122 aa	Known RBP	13.89	□□□□□ -0.19
RFX2-222	ENST00000592546	COCH	O43405	550 aa		13.89	□□□□□ -0.19
RFX2-222	ENST00000592546	SUV39H1	O43463	412 aa		13.89	□□□□□ -0.19
RFX2-222	ENST00000592546	AKR7A2	O43488	359 aa		13.89	□□□□□ -0.19
RFX2-222	ENST00000592546	F11	P03951	625 aa		13.89	□□□□□ -0.19
RFX2-222	ENST00000592546	GALT	P07902	379 aa		13.89	□□□□□ -0.19
RFX2-222	ENST00000592546	EPB42	P16452	691 aa		13.89	□□□□□ -0.19
RFX2-222	ENST00000592546	CPN2	P22792	545 aa		13.89	□□□□□ -0.19
RFX2-222	ENST00000592546	TGM4	P49221	684 aa		13.89	□□□□□ -0.19
RFX2-222	ENST00000592546	SLC11A2	P49281	568 aa		13.89	□□□□□ -0.19
RFX2-222	ENST00000592546	CPSF6	Q16630	551 aa	Known RBP eCLIP	13.89	□□□□□ -0.19
RFX2-222	ENST00000592546	FAM131A	Q6UXB0	335 aa		13.89	□□□□□ -0.19
RFX2-222	ENST00000592546	GDPGP1	Q6ZNW5	385 aa		13.89	□□□□□ -0.19
RFX2-222	ENST00000592546	CREB3L2	Q70SY1	520 aa		13.89	□□□□□ -0.19
RFX2-222	ENST00000592546	TET1	Q8NFU7	2136 aa		13.89	□□□□□ -0.19
RFX2-222	ENST00000592546	BTN2A2	Q8WVV5	523 aa		13.89	□□□□□ -0.19
RFX2-222	ENST00000592546	TRMT61A	Q96FX7	289 aa	Known RBP	13.89	□□□□□ -0.19
RFX2-222	ENST00000592546	UCK2	Q9BZX2	261 aa		13.89	□□□□□ -0.19
RFX2-222	ENST00000592546	TMEM245	Q9H330	911 aa		13.89	□□□□□ -0.19
RFX2-222	ENST00000592546	NARFL	Q9H6Q4	476 aa		13.89	□□□□□ -0.19
RFX2-222	ENST00000592546	STARD7	Q9NQZ5	370 aa		13.89	□□□□□ -0.19
RFX2-222	ENST00000592546	NDUFAF4	Q9P032	175 aa		13.89	□□□□□ -0.19
RFX2-222	ENST00000592546		A0A1W2PQ45	241 aa	Predicted RBP	13.88	□□□□□ -0.19
RFX2-222	ENST00000592546		A0A1W2PQY0	241 aa		13.88	□□□□□ -0.19
RFX2-222	ENST00000592546	LEUTX	A8MZ59	168 aa		13.88	□□□□□ -0.19
RFX2-222	ENST00000592546	ZNF670-ZNF695	F2Z2N8	137 aa		13.88	□□□□□ -0.19
RFX2-222	ENST00000592546	ADAMDEC1	O15204	470 aa		13.88	□□□□□ -0.19
RFX2-222	ENST00000592546	PLA2G10	O15496	165 aa		13.88	□□□□□ -0.19
RFX2-222	ENST00000592546	CYP2A6	P11509	494 aa	Predicted RBP	13.88	□□□□□ -0.19
RFX2-222	ENST00000592546	CHM	P24386	653 aa		13.88	□□□□□ -0.19
RFX2-222	ENST00000592546	UQCRC1	P31930	480 aa		13.88	□□□□□ -0.19
RFX2-222	ENST00000592546	RUNX1T1	Q06455	604 aa		13.88	□□□□□ -0.19
RFX2-222	ENST00000592546	VEPH1	Q14D04	833 aa		13.88	□□□□□ -0.19
RFX2-222	ENST00000592546	QPRT	Q15274	297 aa		13.88	□□□□□ -0.19
RFX2-222	ENST00000592546	PTCHD3	Q3KNS1	767 aa		13.88	□□□□□ -0.19
RFX2-222	ENST00000592546	ZNF648	Q5T619	568 aa	Predicted RBP	13.88	□□□□□ -0.19
RFX2-222	ENST00000592546	SAXO2	Q658L1	398 aa		13.88	□□□□□ -0.19
RFX2-222	ENST00000592546	LHX8	Q68G74	356 aa		13.88	□□□□□ -0.19
RFX2-222	ENST00000592546	PLAG1	Q6DJT9	500 aa		13.88	□□□□□ -0.19
RFX2-222	ENST00000592546	ZNF621	Q6ZSS3	439 aa		13.88	□□□□□ -0.19
RFX2-222	ENST00000592546	STK40	Q8N2I9	435 aa		13.88	□□□□□ -0.19
RFX2-222	ENST00000592546	OR4C15	Q8NGM1	316 aa		13.88	□□□□□ -0.19
RFX2-222	ENST00000592546	UBTD2	Q8WUN7	234 aa		13.88	□□□□□ -0.19
RFX2-222	ENST00000592546	NECTIN4	Q96NY8	510 aa		13.88	□□□□□ -0.19
RFX2-222	ENST00000592546	TRAF4	Q9BUZ4	470 aa	Predicted RBP	13.88	□□□□□ -0.19
RFX2-222	ENST00000592546	MIXL1	Q9H2W2	232 aa		13.88	□□□□□ -0.19
RFX2-222	ENST00000592546	ZNF556	Q9HAH1	456 aa		13.88	□□□□□ -0.19
RFX2-222	ENST00000592546	SH3D21	A4FU49	640 aa		13.88	□□□□□ -0.19
RFX2-222	ENST00000592546	ZNF840P	A6NDX5	716 aa		13.88	□□□□□ -0.19
RFX2-222	ENST00000592546	MAGEB17	A8MXT2	336 aa		13.88	□□□□□ -0.19
RFX2-222	ENST00000592546	ANKRD66	B4E2M5	251 aa		13.88	□□□□□ -0.19
RFX2-222	ENST00000592546		H7C0S8	307 aa		13.88	□□□□□ -0.19
RFX2-222	ENST00000592546	SCN2B	O60939	215 aa		13.88	□□□□□ -0.19
RFX2-222	ENST00000592546	TRIM3	O75382	744 aa	Predicted RBP	13.88	□□□□□ -0.19
RFX2-222	ENST00000592546	OR2B3	O76000	313 aa		13.88	□□□□□ -0.19
RFX2-222	ENST00000592546	PRAMEF12	O95522	483 aa		13.88	□□□□□ -0.19
RFX2-222	ENST00000592546	CD160	O95971	181 aa		13.88	□□□□□ -0.19
RFX2-222	ENST00000592546	FH	P07954	510 aa		13.88	□□□□□ -0.19
RFX2-222	ENST00000592546	RHOC	P08134	193 aa		13.88	□□□□□ -0.19
RFX2-222	ENST00000592546	IRF1	P10914	325 aa		13.88	□□□□□ -0.19
RFX2-222	ENST00000592546	ZNF30	P17039	623 aa		13.88	□□□□□ -0.19
RFX2-222	ENST00000592546	POLR2C	P19387	275 aa	Predicted RBP	13.88	□□□□□ -0.19
RFX2-222	ENST00000592546	ALAS2	P22557	587 aa		13.88	□□□□□ -0.19
RFX2-222	ENST00000592546	CORO1A	P31146	461 aa	Known RBP	13.88	□□□□□ -0.19
RFX2-222	ENST00000592546	CRYBB2	P43320	205 aa		13.88	□□□□□ -0.19
RFX2-222	ENST00000592546	LARS2	Q15031	903 aa	Known RBP	13.88	□□□□□ -0.19
RFX2-222	ENST00000592546	CCNJ	Q5T5M9	372 aa		13.88	□□□□□ -0.19
RFX2-222	ENST00000592546	LAMTOR1	Q6IAA8	161 aa		13.88	□□□□□ -0.19
RFX2-222	ENST00000592546	GRAMD2A	Q8IUY3	354 aa		13.88	□□□□□ -0.19

Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms