RNA–Protein interactions for RNA: ENST00000592012.5

MBD3-209, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 5

Gene MBD3, Length 2,379 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-209ENST00000592012 ARHGDIAP52565 204 aa18.86■□□□□ 0.61
MBD3-209ENST00000592012 CASP9P55211 416 aa18.86■□□□□ 0.61
MBD3-209ENST00000592012 ISL1P61371 349 aa18.86■□□□□ 0.61
MBD3-209ENST00000592012 TEAD4Q15561 434 aa18.86■□□□□ 0.61
MBD3-209ENST00000592012 RBM48Q5RL73 367 aaKnown RBP18.86■□□□□ 0.61
MBD3-209ENST00000592012 ATAT1Q5SQI0 421 aa18.86■□□□□ 0.61
MBD3-209ENST00000592012 DEPDC1Q5TB30 811 aa18.86■□□□□ 0.61
MBD3-209ENST00000592012 IKBIPQ70UQ0 350 aa18.86■□□□□ 0.61
MBD3-209ENST00000592012 SMPDL3AQ92484 453 aa18.86■□□□□ 0.61
MBD3-209ENST00000592012 HDAC2Q92769 488 aaKnown RBP18.86■□□□□ 0.61
MBD3-209ENST00000592012 EZH1Q92800 747 aaPredicted RBP18.86■□□□□ 0.61
MBD3-209ENST00000592012 TPD52L3Q96J77 140 aa18.86■□□□□ 0.61
MBD3-209ENST00000592012 AIF1LQ9BQI0 150 aa18.86■□□□□ 0.61
MBD3-209ENST00000592012 ZNF717Q9BY31 904 aaPredicted RBP18.86■□□□□ 0.61
MBD3-209ENST00000592012 SLC6A16Q9GZN6 736 aa18.86■□□□□ 0.61
MBD3-209ENST00000592012 POLR1BQ9H9Y6 1135 aa18.86■□□□□ 0.61
MBD3-209ENST00000592012 AP1M2Q9Y6Q5 423 aa18.86■□□□□ 0.61
MBD3-209ENST00000592012 GOLGA4Q13439 2230 aaKnown RBP18.86■□□□□ 0.61
MBD3-209ENST00000592012 PLXND1Q9Y4D7 1925 aa18.86■□□□□ 0.61
MBD3-209ENST00000592012 ANKDD1BA6NHY2 528 aa18.85■□□□□ 0.61
MBD3-209ENST00000592012 MYO1GB0I1T2 1018 aa18.85■□□□□ 0.61
MBD3-209ENST00000592012 MITFO75030 526 aaPredicted RBP18.85■□□□□ 0.61
MBD3-209ENST00000592012 ETFAP13804 333 aa18.85■□□□□ 0.61
MBD3-209ENST00000592012 PSMB5P28074 263 aa18.85■□□□□ 0.61
MBD3-209ENST00000592012 SEC13P55735 322 aa18.85■□□□□ 0.61
MBD3-209ENST00000592012 KCNJ10P78508 379 aa18.85■□□□□ 0.61
MBD3-209ENST00000592012 CTBSQ01459 385 aa18.85■□□□□ 0.61
MBD3-209ENST00000592012 DMPKQ09013 629 aa18.85■□□□□ 0.61
MBD3-209ENST00000592012 DYNC1I2Q13409 638 aaKnown RBP18.85■□□□□ 0.61
MBD3-209ENST00000592012 MEP1AQ16819 746 aa18.85■□□□□ 0.61
MBD3-209ENST00000592012 CTU2Q2VPK5 515 aaKnown RBP18.85■□□□□ 0.61
MBD3-209ENST00000592012 C6orf141Q5SZD1 244 aa18.85■□□□□ 0.61
MBD3-209ENST00000592012 KIAA1211LQ6NV74 962 aa18.85■□□□□ 0.61
MBD3-209ENST00000592012 ZNF773Q6PK81 442 aa18.85■□□□□ 0.61
MBD3-209ENST00000592012 ANGPTL8Q6UXH0 198 aa18.85■□□□□ 0.61
MBD3-209ENST00000592012 MMP21Q8N119 569 aa18.85■□□□□ 0.61
MBD3-209ENST00000592012 CHDHQ8NE62 594 aaPredicted RBP18.85■□□□□ 0.61
MBD3-209ENST00000592012 OR52N2Q8NGI0 321 aa18.85■□□□□ 0.61
MBD3-209ENST00000592012 MKRN2Q9H000 416 aaKnown RBP18.85■□□□□ 0.61
MBD3-209ENST00000592012 PCBD2Q9H0N5 130 aa18.85■□□□□ 0.61
MBD3-209ENST00000592012 TAS2R9Q9NYW1 312 aa18.85■□□□□ 0.61
MBD3-209ENST00000592012 AHSPQ9NZD4 102 aa18.85■□□□□ 0.61
MBD3-209ENST00000592012 SPATA7Q9P0W8 599 aa18.85■□□□□ 0.61
MBD3-209ENST00000592012 ORC6Q9Y5N6 252 aa18.85■□□□□ 0.61
MBD3-209ENST00000592012 H7BY64 318 aa18.85■□□□□ 0.61
MBD3-209ENST00000592012 SUV39H1O43463 412 aa18.85■□□□□ 0.61
MBD3-209ENST00000592012 ACP5P13686 325 aa18.85■□□□□ 0.61
MBD3-209ENST00000592012 IL7RP16871 459 aa18.85■□□□□ 0.61
MBD3-209ENST00000592012 IGFBP5P24593 272 aa18.85■□□□□ 0.61
MBD3-209ENST00000592012 CXCR2P25025 360 aa18.85■□□□□ 0.61
MBD3-209ENST00000592012 DAPP51397 102 aa18.85■□□□□ 0.61
MBD3-209ENST00000592012 CCR8P51685 355 aa18.85■□□□□ 0.61
MBD3-209ENST00000592012 CD47Q08722 323 aa18.85■□□□□ 0.61
MBD3-209ENST00000592012 ZNF691Q5VV52 312 aa18.85■□□□□ 0.61
MBD3-209ENST00000592012 KHDRBS2Q5VWX1 349 aaKnown RBP18.85■□□□□ 0.61
MBD3-209ENST00000592012 KDM4DQ6B0I6 523 aa18.85■□□□□ 0.61
MBD3-209ENST00000592012 CLVS1Q8IUQ0 354 aaPredicted RBP18.85■□□□□ 0.61
MBD3-209ENST00000592012 PHF6Q8IWS0 365 aaKnown RBP eCLIP18.85■□□□□ 0.61
MBD3-209ENST00000592012 LINC01555Q8NAE3 123 aa18.85■□□□□ 0.61
MBD3-209ENST00000592012 PIK3C3Q8NEB9 887 aa18.85■□□□□ 0.61
MBD3-209ENST00000592012 MRPL38Q96DV4 380 aaKnown RBP18.85■□□□□ 0.61
MBD3-209ENST00000592012 NRBF2Q96F24 287 aa18.85■□□□□ 0.61
MBD3-209ENST00000592012 PRAP1Q96NZ9 151 aa18.85■□□□□ 0.61
MBD3-209ENST00000592012 INSM2Q96T92 566 aaPredicted RBP18.85■□□□□ 0.61
MBD3-209ENST00000592012 C1QTNF2Q9BXJ5 285 aa18.85■□□□□ 0.61
MBD3-209ENST00000592012 ADNPQ9H2P0 1102 aa18.85■□□□□ 0.61
MBD3-209ENST00000592012 CXorf21Q9HAI6 301 aa18.85■□□□□ 0.61
MBD3-209ENST00000592012 PHPT1Q9NRX4 125 aaPredicted RBP18.85■□□□□ 0.61
MBD3-209ENST00000592012 C1GALT1Q9NS00 363 aa18.85■□□□□ 0.61
MBD3-209ENST00000592012 TAAR2Q9P1P5 351 aa18.85■□□□□ 0.61
MBD3-209ENST00000592012 FPR1P21462 350 aa18.84■□□□□ 0.61
MBD3-209ENST00000592012 EEF1B2P24534 225 aaKnown RBP18.84■□□□□ 0.61
MBD3-209ENST00000592012 TNFRSF4P43489 277 aa18.84■□□□□ 0.61
MBD3-209ENST00000592012 TPD52P55327 224 aaPredicted RBP18.84■□□□□ 0.61
MBD3-209ENST00000592012 RPS21P63220 83 aaKnown RBP18.84■□□□□ 0.61
MBD3-209ENST00000592012 RAB39AQ14964 217 aa18.84■□□□□ 0.61
MBD3-209ENST00000592012 MLF2Q15773 248 aaPredicted RBP18.84■□□□□ 0.61
MBD3-209ENST00000592012 ZNF776Q68DI1 518 aaPredicted RBP18.84■□□□□ 0.61
MBD3-209ENST00000592012 LAIR2Q6ISS4 152 aa18.84■□□□□ 0.61
MBD3-209ENST00000592012 F2RL3Q96RI0 385 aa18.84■□□□□ 0.61
MBD3-209ENST00000592012 DOHHQ9BU89 302 aa18.84■□□□□ 0.61
MBD3-209ENST00000592012 MS4A8Q9BY19 250 aa18.84■□□□□ 0.61
MBD3-209ENST00000592012 LIN28AQ9H9Z2 209 aaKnown RBP18.84■□□□□ 0.61
MBD3-209ENST00000592012 ADPRHL2Q9NX46 363 aa18.84■□□□□ 0.61
MBD3-209ENST00000592012 FBXL12Q9NXK8 326 aa18.84■□□□□ 0.61
MBD3-209ENST00000592012 A0A1W2PRB8 838 aa18.84■□□□□ 0.61
MBD3-209ENST00000592012 FEZF1A0PJY2 475 aa18.84■□□□□ 0.61
MBD3-209ENST00000592012 LATO43561 262 aa18.84■□□□□ 0.61
MBD3-209ENST00000592012 SEMA3DO95025 777 aa18.84■□□□□ 0.61
MBD3-209ENST00000592012 ITGAMP11215 1152 aa18.84■□□□□ 0.61
MBD3-209ENST00000592012 MAGEA10P43363 369 aaPredicted RBP18.84■□□□□ 0.61
MBD3-209ENST00000592012 ITGA1P56199 1179 aa18.84■□□□□ 0.61
MBD3-209ENST00000592012 CYP4F2P78329 520 aa18.84■□□□□ 0.61
MBD3-209ENST00000592012 SLC5A12Q1EHB4 618 aa18.84■□□□□ 0.61
MBD3-209ENST00000592012 HORMAD1Q86X24 394 aa18.84■□□□□ 0.61
MBD3-209ENST00000592012 ERI1Q8IV48 349 aaKnown RBP18.84■□□□□ 0.61
MBD3-209ENST00000592012 ISOC1Q96CN7 298 aa18.84■□□□□ 0.61
MBD3-209ENST00000592012 MIEF1Q9NQG6 463 aa18.84■□□□□ 0.61
MBD3-209ENST00000592012 ACSL6Q9UKU0 697 aa18.84■□□□□ 0.61
MBD3-209ENST00000592012 SAMHD1Q9Y3Z3 626 aaKnown RBP18.84■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms