RNA–Protein interactions for RNA: ENST00000591315.5

VMP1-211, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 800 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-211ENST00000591315 SAP18O00422 153 aaKnown RBP10.88□□□□□ -0.67
VMP1-211ENST00000591315 RTCAO00442 366 aaKnown RBP10.88□□□□□ -0.67
VMP1-211ENST00000591315 PEX12O00623 359 aa10.88□□□□□ -0.67
VMP1-211ENST00000591315 ERI3O43414 337 aaKnown RBP10.88□□□□□ -0.67
VMP1-211ENST00000591315 DLX3O60479 287 aa10.88□□□□□ -0.67
VMP1-211ENST00000591315 SMIM24O75264 130 aa10.88□□□□□ -0.67
VMP1-211ENST00000591315 HEXBP07686 556 aa10.88□□□□□ -0.67
VMP1-211ENST00000591315 CXCR2P25025 360 aa10.88□□□□□ -0.67
VMP1-211ENST00000591315 PLA2G16P53816 162 aa10.88□□□□□ -0.67
VMP1-211ENST00000591315 RUNX2Q13950 521 aa10.88□□□□□ -0.67
VMP1-211ENST00000591315 HERC3Q15034 1050 aa10.88□□□□□ -0.67
VMP1-211ENST00000591315 MINDY4Q4G0A6 757 aa10.88□□□□□ -0.67
VMP1-211ENST00000591315 UNC50Q53HI1 259 aa10.88□□□□□ -0.67
VMP1-211ENST00000591315 TDRPQ86YL5 185 aa10.88□□□□□ -0.67
VMP1-211ENST00000591315 MYLK4Q86YV6 388 aaPredicted RBP10.88□□□□□ -0.67
VMP1-211ENST00000591315 PARP9Q8IXQ6 854 aa10.88□□□□□ -0.67
VMP1-211ENST00000591315 C4orf33Q8N1A6 199 aa10.88□□□□□ -0.67
VMP1-211ENST00000591315 LSM14AQ8ND56 463 aaKnown RBP10.88□□□□□ -0.67
VMP1-211ENST00000591315 OR7G3Q8NG95 312 aa10.88□□□□□ -0.67
VMP1-211ENST00000591315 C9orf43Q8TAL5 461 aaPredicted RBP10.88□□□□□ -0.67
VMP1-211ENST00000591315 ZNF473Q8WTR7 871 aaKnown RBP10.88□□□□□ -0.67
VMP1-211ENST00000591315 TSLPQ969D9 159 aa10.88□□□□□ -0.67
VMP1-211ENST00000591315 CAVIN3Q969G5 261 aa10.88□□□□□ -0.67
VMP1-211ENST00000591315 QRFPRQ96P65 431 aa10.88□□□□□ -0.67
VMP1-211ENST00000591315 EFCAB11Q9BUY7 163 aa10.88□□□□□ -0.67
VMP1-211ENST00000591315 NUDT9Q9BW91 350 aa10.88□□□□□ -0.67
VMP1-211ENST00000591315 TGIF2Q9GZN2 237 aa10.88□□□□□ -0.67
VMP1-211ENST00000591315 OR51B5Q9H339 312 aa10.88□□□□□ -0.67
VMP1-211ENST00000591315 LANCL2Q9NS86 450 aa10.88□□□□□ -0.67
VMP1-211ENST00000591315 NXT1Q9UKK6 140 aaKnown RBP10.88□□□□□ -0.67
VMP1-211ENST00000591315 CCDC189A1A4V9 331 aa10.87□□□□□ -0.67
VMP1-211ENST00000591315 ANKDD1BA6NHY2 528 aa10.87□□□□□ -0.67
VMP1-211ENST00000591315 STX16-NPEPL1H3BU86 382 aa10.87□□□□□ -0.67
VMP1-211ENST00000591315 PYCARD-AS1I3L0S3 204 aa10.87□□□□□ -0.67
VMP1-211ENST00000591315 AGPSO00116 658 aa10.87□□□□□ -0.67
VMP1-211ENST00000591315 STX16O14662 325 aa10.87□□□□□ -0.67
VMP1-211ENST00000591315 PRPF4O43172 522 aaKnown RBP eCLIP10.87□□□□□ -0.67
VMP1-211ENST00000591315 B4GALT2O60909 372 aa10.87□□□□□ -0.67
VMP1-211ENST00000591315 CLEC3AO75596 197 aa10.87□□□□□ -0.67
VMP1-211ENST00000591315 CEACAM4O75871 244 aa10.87□□□□□ -0.67
VMP1-211ENST00000591315 TGFB1P01137 390 aa10.87□□□□□ -0.67
VMP1-211ENST00000591315 RPS17P08708 135 aaKnown RBP10.87□□□□□ -0.67
VMP1-211ENST00000591315 CD63P08962 238 aa10.87□□□□□ -0.67
VMP1-211ENST00000591315 COX6A1P12074 109 aa10.87□□□□□ -0.67
VMP1-211ENST00000591315 KRT15P19012 456 aa10.87□□□□□ -0.67
VMP1-211ENST00000591315 CERS1P27544 350 aa10.87□□□□□ -0.67
VMP1-211ENST00000591315 NEK2P51955 445 aa10.87□□□□□ -0.67
VMP1-211ENST00000591315 HNRNPFP52597 415 aaKnown RBP10.87□□□□□ -0.67
VMP1-211ENST00000591315 BTG2P78543 158 aa10.87□□□□□ -0.67
VMP1-211ENST00000591315 PCDH1Q08174 1060 aa10.87□□□□□ -0.67
VMP1-211ENST00000591315 TRAF3Q13114 568 aa10.87□□□□□ -0.67
VMP1-211ENST00000591315 CPSF6Q16630 551 aaKnown RBP eCLIP10.87□□□□□ -0.67
VMP1-211ENST00000591315 MFSD4BQ5TF39 518 aa10.87□□□□□ -0.67
VMP1-211ENST00000591315 GRHL2Q6ISB3 625 aa10.87□□□□□ -0.67
VMP1-211ENST00000591315 MED27Q6P2C8 311 aa10.87□□□□□ -0.67
VMP1-211ENST00000591315 EMBQ6PCB8 327 aa10.87□□□□□ -0.67
VMP1-211ENST00000591315 ZNF793Q6ZN11 406 aa10.87□□□□□ -0.67
VMP1-211ENST00000591315 LAS2Q8IYD9 372 aa10.87□□□□□ -0.67
VMP1-211ENST00000591315 CA13Q8N1Q1 262 aa10.87□□□□□ -0.67
VMP1-211ENST00000591315 TMEM52Q8NDY8 209 aa10.87□□□□□ -0.67
VMP1-211ENST00000591315 HUS1BQ8NHY5 278 aa10.87□□□□□ -0.67
VMP1-211ENST00000591315 ACMSDQ8TDX5 336 aa10.87□□□□□ -0.67
VMP1-211ENST00000591315 ZNF483Q8TF39 744 aaPredicted RBP10.87□□□□□ -0.67
VMP1-211ENST00000591315 GAL3ST3Q96A11 431 aa10.87□□□□□ -0.67
VMP1-211ENST00000591315 MTFMTQ96DP5 389 aaKnown RBP10.87□□□□□ -0.67
VMP1-211ENST00000591315 TMEM237Q96Q45 408 aa10.87□□□□□ -0.67
VMP1-211ENST00000591315 MTERF1Q99551 399 aaKnown RBP10.87□□□□□ -0.67
VMP1-211ENST00000591315 SLC25A23Q9BV35 468 aa10.87□□□□□ -0.67
VMP1-211ENST00000591315 MS4A8Q9BY19 250 aa10.87□□□□□ -0.67
VMP1-211ENST00000591315 SLC25A18Q9H1K4 315 aa10.87□□□□□ -0.67
VMP1-211ENST00000591315 ADNPQ9H2P0 1102 aa10.87□□□□□ -0.67
VMP1-211ENST00000591315 ACTR8Q9H981 624 aa10.87□□□□□ -0.67
VMP1-211ENST00000591315 ZBTB20Q9HC78 741 aaPredicted RBP10.87□□□□□ -0.67
VMP1-211ENST00000591315 ZNF160Q9HCG1 818 aa10.87□□□□□ -0.67
VMP1-211ENST00000591315 SEMA4BQ9NPR2 832 aaPredicted RBP10.87□□□□□ -0.67
VMP1-211ENST00000591315 SEMA3GQ9NS98 782 aa10.87□□□□□ -0.67
VMP1-211ENST00000591315 ZNF225Q9UK10 706 aa10.87□□□□□ -0.67
VMP1-211ENST00000591315 RAB21Q9UL25 225 aa10.87□□□□□ -0.67
VMP1-211ENST00000591315 MKRN2OSH3BPM6 223 aa10.86□□□□□ -0.67
VMP1-211ENST00000591315 ETHE1O95571 254 aa10.86□□□□□ -0.67
VMP1-211ENST00000591315 PROCP04070 461 aa10.86□□□□□ -0.67
VMP1-211ENST00000591315 NUDT17P0C025 328 aa10.86□□□□□ -0.67
VMP1-211ENST00000591315 ACPPP15309 386 aa10.86□□□□□ -0.67
VMP1-211ENST00000591315 CREB1P16220 341 aa10.86□□□□□ -0.67
VMP1-211ENST00000591315 RPS13P62277 151 aaKnown RBP10.86□□□□□ -0.67
VMP1-211ENST00000591315 RHAGQ02094 409 aa10.86□□□□□ -0.67
VMP1-211ENST00000591315 LAPTM5Q13571 262 aa10.86□□□□□ -0.67
VMP1-211ENST00000591315 PCOLCEQ15113 449 aa10.86□□□□□ -0.67
VMP1-211ENST00000591315 ZRSR2Q15696 482 aaKnown RBP10.86□□□□□ -0.67
VMP1-211ENST00000591315 ADPRMQ3LIE5 342 aa10.86□□□□□ -0.67
VMP1-211ENST00000591315 LACTB2Q53H82 288 aaPredicted RBP10.86□□□□□ -0.67
VMP1-211ENST00000591315 PAGE2BQ5JRK9 111 aa10.86□□□□□ -0.67
VMP1-211ENST00000591315 LETMD1Q6P1Q0 360 aa10.86□□□□□ -0.67
VMP1-211ENST00000591315 ABHD17CQ6PCB6 329 aa10.86□□□□□ -0.67
VMP1-211ENST00000591315 TMEM205Q6UW68 189 aa10.86□□□□□ -0.67
VMP1-211ENST00000591315 ASB18Q6ZVZ8 466 aa10.86□□□□□ -0.67
VMP1-211ENST00000591315 MED25Q71SY5 747 aa10.86□□□□□ -0.67
VMP1-211ENST00000591315 ABHD13Q7L211 337 aa10.86□□□□□ -0.67
VMP1-211ENST00000591315 GALNT16Q8N428 558 aa10.86□□□□□ -0.67
VMP1-211ENST00000591315 TMEM102Q8N9M5 508 aaPredicted RBP10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms