RNA–Protein interactions for RNA: ENST00000587201.5

TPM4-206, Transcript of tropomyosin 4, humanhuman

TSL 2

Gene TPM4, Length 877 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-206ENST00000587201 FAR2Q96K12 515 aa16.66■□□□□ 0.26
TPM4-206ENST00000587201 LPAR4Q99677 370 aa16.66■□□□□ 0.26
TPM4-206ENST00000587201 RHBGQ9H310 441 aa16.66■□□□□ 0.26
TPM4-206ENST00000587201 NT5DC2Q9H857 520 aa16.66■□□□□ 0.26
TPM4-206ENST00000587201 CLK4Q9HAZ1 481 aaKnown RBP16.66■□□□□ 0.26
TPM4-206ENST00000587201 TEKT2Q9UIF3 430 aa16.66■□□□□ 0.26
TPM4-206ENST00000587201 RP1L1Q8IWN7 2480 aaPredicted RBP16.65■□□□□ 0.26
TPM4-206ENST00000587201 FLNCQ14315 2725 aa16.65■□□□□ 0.26
TPM4-206ENST00000587201 ANKDD1BA6NHY2 528 aa16.65■□□□□ 0.26
TPM4-206ENST00000587201 A8MUI8 341 aa16.65■□□□□ 0.26
TPM4-206ENST00000587201 SUPT3HB4E1H0 165 aa16.65■□□□□ 0.26
TPM4-206ENST00000587201 PSMD12O00232 456 aaPredicted RBP16.65■□□□□ 0.26
TPM4-206ENST00000587201 SUPT3HO75486 399 aa16.65■□□□□ 0.26
TPM4-206ENST00000587201 GSTM2P28161 218 aa16.65■□□□□ 0.26
TPM4-206ENST00000587201 KCNC1P48547 511 aa16.65■□□□□ 0.26
TPM4-206ENST00000587201 OR4D2P58180 307 aa16.65■□□□□ 0.26
TPM4-206ENST00000587201 BTN3A2P78410 334 aa16.65■□□□□ 0.26
TPM4-206ENST00000587201 ZNF33BQ06732 778 aa16.65■□□□□ 0.26
TPM4-206ENST00000587201 BMPR2Q13873 1038 aa16.65■□□□□ 0.26
TPM4-206ENST00000587201 ELOAQ14241 798 aaKnown RBP16.65■□□□□ 0.26
TPM4-206ENST00000587201 EXT1Q16394 746 aa16.65■□□□□ 0.26
TPM4-206ENST00000587201 PDK4Q16654 411 aa16.65■□□□□ 0.26
TPM4-206ENST00000587201 XKR6Q5GH73 641 aa16.65■□□□□ 0.26
TPM4-206ENST00000587201 MROH9Q5TGP6 573 aa16.65■□□□□ 0.26
TPM4-206ENST00000587201 ABHD17BQ5VST6 288 aa16.65■□□□□ 0.26
TPM4-206ENST00000587201 ISCA2Q86U28 154 aa16.65■□□□□ 0.26
TPM4-206ENST00000587201 NOA1Q8NC60 698 aaKnown RBP16.65■□□□□ 0.26
TPM4-206ENST00000587201 PRR7Q8TB68 274 aa16.65■□□□□ 0.26
TPM4-206ENST00000587201 GAL3ST3Q96A11 431 aa16.65■□□□□ 0.26
TPM4-206ENST00000587201 NXNL1Q96CM4 212 aa16.65■□□□□ 0.26
TPM4-206ENST00000587201 PTCD3Q96EY7 689 aaKnown RBP16.65■□□□□ 0.26
TPM4-206ENST00000587201 CD244Q9BZW8 370 aa16.65■□□□□ 0.26
TPM4-206ENST00000587201 PITHD1Q9GZP4 211 aaPredicted RBP16.65■□□□□ 0.26
TPM4-206ENST00000587201 AICDAQ9GZX7 198 aa16.65■□□□□ 0.26
TPM4-206ENST00000587201 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP16.65■□□□□ 0.263e-9■■■□□ 17.9
TPM4-206ENST00000587201 EHD1Q9H4M9 534 aa16.65■□□□□ 0.26
TPM4-206ENST00000587201 KCNK13Q9HB14 408 aa16.65■□□□□ 0.26
TPM4-206ENST00000587201 IGSF5Q9NSI5 407 aa16.65■□□□□ 0.26
TPM4-206ENST00000587201 NINJ2Q9NZG7 142 aa16.65■□□□□ 0.26
TPM4-206ENST00000587201 NUDT4Q9NZJ9 180 aa16.65■□□□□ 0.26
TPM4-206ENST00000587201 COPG2Q9UBF2 871 aa16.65■□□□□ 0.26
TPM4-206ENST00000587201 DMGDHQ9UI17 866 aaKnown RBP16.65■□□□□ 0.26
TPM4-206ENST00000587201 ACOT9Q9Y305 439 aa16.65■□□□□ 0.26
TPM4-206ENST00000587201 A0A087X1B8 175 aa16.64■□□□□ 0.25
TPM4-206ENST00000587201 TRAV17A0A0B4J275 112 aa16.64■□□□□ 0.25
TPM4-206ENST00000587201 C4orf51C9J302 202 aa16.64■□□□□ 0.25
TPM4-206ENST00000587201 KERAO60938 352 aa16.64■□□□□ 0.25
TPM4-206ENST00000587201 CBX6O95503 412 aa16.64■□□□□ 0.25
TPM4-206ENST00000587201 WDPCPO95876 746 aa16.64■□□□□ 0.25
TPM4-206ENST00000587201 CTAGE8P0CG41 777 aa16.64■□□□□ 0.25
TPM4-206ENST00000587201 RNH1P13489 461 aaKnown RBP16.64■□□□□ 0.25
TPM4-206ENST00000587201 TNFSF10P50591 281 aa16.64■□□□□ 0.25
TPM4-206ENST00000587201 DOC2AQ14183 400 aa16.64■□□□□ 0.25
TPM4-206ENST00000587201 HIST2H2ACQ16777 129 aaPredicted RBP16.64■□□□□ 0.25
TPM4-206ENST00000587201 HIST2H2AA3Q6FI13 130 aa16.64■□□□□ 0.25
TPM4-206ENST00000587201 RPUSD3Q6P087 351 aaKnown RBP16.64■□□□□ 0.25
TPM4-206ENST00000587201 QSOX2Q6ZRP7 698 aa16.64■□□□□ 0.25
TPM4-206ENST00000587201 CTAGE4Q8IX94 777 aa16.64■□□□□ 0.25
TPM4-206ENST00000587201 CA13Q8N1Q1 262 aa16.64■□□□□ 0.25
TPM4-206ENST00000587201 M1APQ8TC57 530 aa16.64■□□□□ 0.25
TPM4-206ENST00000587201 GRHL3Q8TE85 626 aa16.64■□□□□ 0.25
TPM4-206ENST00000587201 KCTD4Q8WVF5 259 aa16.64■□□□□ 0.25
TPM4-206ENST00000587201 IFT81Q8WYA0 676 aa16.64■□□□□ 0.25
TPM4-206ENST00000587201 SEC16BQ96JE7 1060 aa16.64■□□□□ 0.25
TPM4-206ENST00000587201 PTCHD1Q96NR3 888 aa16.64■□□□□ 0.25
TPM4-206ENST00000587201 ATOH8Q96SQ7 321 aa16.64■□□□□ 0.25
TPM4-206ENST00000587201 BARD1Q99728 777 aaKnown RBP16.64■□□□□ 0.25
TPM4-206ENST00000587201 EFCAB11Q9BUY7 163 aa16.64■□□□□ 0.25
TPM4-206ENST00000587201 PRM3Q9NNZ6 103 aa16.64■□□□□ 0.25
TPM4-206ENST00000587201 STMN3Q9NZ72 180 aa16.64■□□□□ 0.25
TPM4-206ENST00000587201 CNTRLQ7Z7A1 2325 aa16.64■□□□□ 0.25
TPM4-206ENST00000587201 DOPEY2Q9Y3R5 2298 aa16.63■□□□□ 0.25
TPM4-206ENST00000587201 HECTD1Q9ULT8 2610 aa16.63■□□□□ 0.25
TPM4-206ENST00000587201 A0A0G2JN53 185 aa16.63■□□□□ 0.25
TPM4-206ENST00000587201 BLACEA4D250 179 aa16.63■□□□□ 0.25
TPM4-206ENST00000587201 LRIT2A6NDA9 550 aa16.63■□□□□ 0.25
TPM4-206ENST00000587201 ANKUB1A6NFN9 424 aa16.63■□□□□ 0.25
TPM4-206ENST00000587201 UBXN8O00124 270 aa16.63■□□□□ 0.25
TPM4-206ENST00000587201 ERI3O43414 337 aaKnown RBP16.63■□□□□ 0.25
TPM4-206ENST00000587201 PRMT3O60678 531 aa16.63■□□□□ 0.25
TPM4-206ENST00000587201 PRAMEF4O60810 478 aa16.63■□□□□ 0.25
TPM4-206ENST00000587201 CLEC3AO75596 197 aa16.63■□□□□ 0.25
TPM4-206ENST00000587201 TUBB4AP04350 444 aa16.63■□□□□ 0.25
TPM4-206ENST00000587201 C2P06681 752 aa16.63■□□□□ 0.25
TPM4-206ENST00000587201 HNRNPH1P31943 449 aaKnown RBP16.63■□□□□ 0.25
TPM4-206ENST00000587201 HPDP32754 393 aaPredicted RBP16.63■□□□□ 0.25
TPM4-206ENST00000587201 BTG2P78543 158 aa16.63■□□□□ 0.25
TPM4-206ENST00000587201 IRF9Q00978 393 aa16.63■□□□□ 0.25
TPM4-206ENST00000587201 IRF8Q02556 426 aa16.63■□□□□ 0.25
TPM4-206ENST00000587201 CHIT1Q13231 466 aa16.63■□□□□ 0.25
TPM4-206ENST00000587201 LAPTM5Q13571 262 aa16.63■□□□□ 0.25
TPM4-206ENST00000587201 PAGE2BQ5JRK9 111 aa16.63■□□□□ 0.25
TPM4-206ENST00000587201 PRAMEF9Q5VWM5 478 aa16.63■□□□□ 0.25
TPM4-206ENST00000587201 FCRLBQ6BAA4 426 aa16.63■□□□□ 0.25
TPM4-206ENST00000587201 LRRC70Q7Z2Q7 622 aa16.63■□□□□ 0.25
TPM4-206ENST00000587201 CCDC91Q7Z6B0 441 aa16.63■□□□□ 0.25
TPM4-206ENST00000587201 CYP4X1Q8N118 509 aa16.63■□□□□ 0.25
TPM4-206ENST00000587201 SUN3Q8TAQ9 357 aa16.63■□□□□ 0.25
TPM4-206ENST00000587201 MS4A6EQ96DS6 147 aa16.63■□□□□ 0.25
TPM4-206ENST00000587201 ZNF354BQ96LW1 612 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms