RNA–Protein interactions for RNA: ENST00000584074.5

PPP4R1-228, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 3

Gene PPP4R1, Length 625 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-228ENST00000584074 CRABP2P29373 138 aa20.18■□□□□ 0.82
PPP4R1-228ENST00000584074 ACTN3Q08043 901 aaPredicted RBP20.18■□□□□ 0.82
PPP4R1-228ENST00000584074 UBAP2Q5T6F2 1119 aaKnown RBP20.18■□□□□ 0.82
PPP4R1-228ENST00000584074 ABHD17BQ5VST6 288 aa20.18■□□□□ 0.82
PPP4R1-228ENST00000584074 ISCA2Q86U28 154 aa20.18■□□□□ 0.82
PPP4R1-228ENST00000584074 MAGEB10Q96LZ2 347 aaPredicted RBP20.18■□□□□ 0.82
PPP4R1-228ENST00000584074 PSMG3-AS1Q96PY0 264 aa20.18■□□□□ 0.82
PPP4R1-228ENST00000584074 RHBGQ9H310 441 aa20.18■□□□□ 0.82
PPP4R1-228ENST00000584074 AGPAT4Q9NRZ5 378 aa20.18■□□□□ 0.82
PPP4R1-228ENST00000584074 IGSF5Q9NSI5 407 aa20.18■□□□□ 0.82
PPP4R1-228ENST00000584074 ASB1Q9Y576 335 aa20.18■□□□□ 0.82
PPP4R1-228ENST00000584074 RP1L1Q8IWN7 2480 aaPredicted RBP20.17■□□□□ 0.82
PPP4R1-228ENST00000584074 A0A0G2JN53 185 aa20.17■□□□□ 0.82
PPP4R1-228ENST00000584074 LRIT2A6NDA9 550 aa20.17■□□□□ 0.82
PPP4R1-228ENST00000584074 ANKUB1A6NFN9 424 aa20.17■□□□□ 0.82
PPP4R1-228ENST00000584074 FAM227AF5H4B4 570 aa20.17■□□□□ 0.82
PPP4R1-228ENST00000584074 CLGNO14967 610 aa20.17■□□□□ 0.82
PPP4R1-228ENST00000584074 S100BP04271 92 aaPredicted RBP20.17■□□□□ 0.82
PPP4R1-228ENST00000584074 JAK1P23458 1154 aa20.17■□□□□ 0.82
PPP4R1-228ENST00000584074 HNRNPH1P31943 449 aaKnown RBP20.17■□□□□ 0.82
PPP4R1-228ENST00000584074 BTG2P78543 158 aa20.17■□□□□ 0.82
PPP4R1-228ENST00000584074 ZNF33BQ06732 778 aa20.17■□□□□ 0.82
PPP4R1-228ENST00000584074 BMPR2Q13873 1038 aa20.17■□□□□ 0.82
PPP4R1-228ENST00000584074 PDK4Q16654 411 aa20.17■□□□□ 0.82
PPP4R1-228ENST00000584074 FCRLBQ6BAA4 426 aa20.17■□□□□ 0.82
PPP4R1-228ENST00000584074 ADNP2Q6IQ32 1131 aa20.17■□□□□ 0.82
PPP4R1-228ENST00000584074 PAPD4Q6PIY7 484 aaKnown RBP20.17■□□□□ 0.82
PPP4R1-228ENST00000584074 TBC1D1Q86TI0 1168 aaPredicted RBP20.17■□□□□ 0.82
PPP4R1-228ENST00000584074 KRT78Q8N1N4 520 aa20.17■□□□□ 0.82
PPP4R1-228ENST00000584074 NOA1Q8NC60 698 aaKnown RBP20.17■□□□□ 0.82
PPP4R1-228ENST00000584074 STAG3L4Q8TBR4 150 aa20.17■□□□□ 0.82
PPP4R1-228ENST00000584074 CCT6BQ92526 530 aa20.17■□□□□ 0.82
PPP4R1-228ENST00000584074 NT5DC2Q9H857 520 aa20.17■□□□□ 0.82
PPP4R1-228ENST00000584074 CLK4Q9HAZ1 481 aaKnown RBP20.17■□□□□ 0.82
PPP4R1-228ENST00000584074 NMRAL1Q9HBL8 299 aa20.17■□□□□ 0.82
PPP4R1-228ENST00000584074 STMN3Q9NZ72 180 aa20.17■□□□□ 0.82
PPP4R1-228ENST00000584074 COPG2Q9UBF2 871 aa20.17■□□□□ 0.82
PPP4R1-228ENST00000584074 DMGDHQ9UI17 866 aaKnown RBP20.17■□□□□ 0.82
PPP4R1-228ENST00000584074 HMX2A2RU54 273 aa20.16■□□□□ 0.82
PPP4R1-228ENST00000584074 CCNT2O60583 730 aaKnown RBP20.16■□□□□ 0.82
PPP4R1-228ENST00000584074 RNH1P13489 461 aaKnown RBP20.16■□□□□ 0.82
PPP4R1-228ENST00000584074 EPORP19235 508 aa20.16■□□□□ 0.82
PPP4R1-228ENST00000584074 CD22P20273 847 aa20.16■□□□□ 0.82
PPP4R1-228ENST00000584074 OR4D2P58180 307 aa20.16■□□□□ 0.82
PPP4R1-228ENST00000584074 STXBP1P61764 594 aaKnown RBP20.16■□□□□ 0.82
PPP4R1-228ENST00000584074 BTN3A2P78410 334 aa20.16■□□□□ 0.82
PPP4R1-228ENST00000584074 DOC2AQ14183 400 aa20.16■□□□□ 0.82
PPP4R1-228ENST00000584074 EXT1Q16394 746 aa20.16■□□□□ 0.82
PPP4R1-228ENST00000584074 XKR6Q5GH73 641 aa20.16■□□□□ 0.82
PPP4R1-228ENST00000584074 MROH9Q5TGP6 573 aa20.16■□□□□ 0.82
PPP4R1-228ENST00000584074 VN1R5Q7Z5H4 357 aa20.16■□□□□ 0.82
PPP4R1-228ENST00000584074 MMGT1Q8N4V1 131 aa20.16■□□□□ 0.82
PPP4R1-228ENST00000584074 TTLQ8NG68 377 aa20.16■□□□□ 0.82
PPP4R1-228ENST00000584074 NXNL1Q96CM4 212 aa20.16■□□□□ 0.82
PPP4R1-228ENST00000584074 MS4A6EQ96DS6 147 aa20.16■□□□□ 0.82
PPP4R1-228ENST00000584074 PTCHD1Q96NR3 888 aa20.16■□□□□ 0.82
PPP4R1-228ENST00000584074 LPAR4Q99677 370 aa20.16■□□□□ 0.82
PPP4R1-228ENST00000584074 CD244Q9BZW8 370 aa20.16■□□□□ 0.82
PPP4R1-228ENST00000584074 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP20.16■□□□□ 0.821e-6■□□□□ 10.1
PPP4R1-228ENST00000584074 EHD1Q9H4M9 534 aa20.16■□□□□ 0.82
PPP4R1-228ENST00000584074 KCNK13Q9HB14 408 aa20.16■□□□□ 0.82
PPP4R1-228ENST00000584074 NINJ2Q9NZG7 142 aa20.16■□□□□ 0.82
PPP4R1-228ENST00000584074 TEKT2Q9UIF3 430 aa20.16■□□□□ 0.82
PPP4R1-228ENST00000584074 ZNF490Q9ULM2 529 aaPredicted RBP20.16■□□□□ 0.82
PPP4R1-228ENST00000584074 ACOT9Q9Y305 439 aa20.16■□□□□ 0.82
PPP4R1-228ENST00000584074 DOPEY2Q9Y3R5 2298 aa20.15■□□□□ 0.82
PPP4R1-228ENST00000584074 USP9YO00507 2555 aaPredicted RBP20.15■□□□□ 0.82
PPP4R1-228ENST00000584074 TRAV17A0A0B4J275 112 aa20.15■□□□□ 0.82
PPP4R1-228ENST00000584074 SUPT3HB4E1H0 165 aa20.15■□□□□ 0.82
PPP4R1-228ENST00000584074 UBXN8O00124 270 aa20.15■□□□□ 0.82
PPP4R1-228ENST00000584074 PSMD12O00232 456 aaPredicted RBP20.15■□□□□ 0.82
PPP4R1-228ENST00000584074 ERI3O43414 337 aaKnown RBP20.15■□□□□ 0.82
PPP4R1-228ENST00000584074 PRMT3O60678 531 aa20.15■□□□□ 0.82
PPP4R1-228ENST00000584074 SUPT3HO75486 399 aa20.15■□□□□ 0.82
PPP4R1-228ENST00000584074 TBX6O95947 436 aaPredicted RBP20.15■□□□□ 0.82
PPP4R1-228ENST00000584074 LTA4HP09960 611 aaKnown RBP20.15■□□□□ 0.82
PPP4R1-228ENST00000584074 RNF224P0DH78 156 aa20.15■□□□□ 0.82
PPP4R1-228ENST00000584074 MAOAP21397 527 aa20.15■□□□□ 0.82
PPP4R1-228ENST00000584074 IRF9Q00978 393 aa20.15■□□□□ 0.82
PPP4R1-228ENST00000584074 UAP1Q16222 522 aaPredicted RBP20.15■□□□□ 0.82
PPP4R1-228ENST00000584074 H3F3CQ6NXT2 135 aa20.15■□□□□ 0.82
PPP4R1-228ENST00000584074 RPUSD3Q6P087 351 aaKnown RBP20.15■□□□□ 0.82
PPP4R1-228ENST00000584074 CA13Q8N1Q1 262 aa20.15■□□□□ 0.82
PPP4R1-228ENST00000584074 M1APQ8TC57 530 aa20.15■□□□□ 0.82
PPP4R1-228ENST00000584074 KCTD4Q8WVF5 259 aa20.15■□□□□ 0.82
PPP4R1-228ENST00000584074 FAR1Q8WVX9 515 aa20.15■□□□□ 0.82
PPP4R1-228ENST00000584074 GAL3ST3Q96A11 431 aa20.15■□□□□ 0.82
PPP4R1-228ENST00000584074 PTCD3Q96EY7 689 aaKnown RBP20.15■□□□□ 0.82
PPP4R1-228ENST00000584074 FAR2Q96K12 515 aa20.15■□□□□ 0.82
PPP4R1-228ENST00000584074 ATOH8Q96SQ7 321 aa20.15■□□□□ 0.82
PPP4R1-228ENST00000584074 PITHD1Q9GZP4 211 aaPredicted RBP20.15■□□□□ 0.82
PPP4R1-228ENST00000584074 RNF32Q9H0A6 362 aa20.15■□□□□ 0.82
PPP4R1-228ENST00000584074 MMP25Q9NPA2 562 aa20.15■□□□□ 0.82
PPP4R1-228ENST00000584074 NUDT4Q9NZJ9 180 aa20.15■□□□□ 0.82
PPP4R1-228ENST00000584074 ANKDD1BA6NHY2 528 aa20.14■□□□□ 0.81
PPP4R1-228ENST00000584074 KERAO60938 352 aa20.14■□□□□ 0.81
PPP4R1-228ENST00000584074 CLEC3AO75596 197 aa20.14■□□□□ 0.81
PPP4R1-228ENST00000584074 C2P06681 752 aa20.14■□□□□ 0.81
PPP4R1-228ENST00000584074 GSTM2P28161 218 aa20.14■□□□□ 0.81
PPP4R1-228ENST00000584074 RUNX2Q13950 521 aa20.14■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms