RNA–Protein interactions for RNA: ENST00000583667.1

GGA3-217, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 4

Gene GGA3, Length 531 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-217ENST00000583667 SETD2Q9BYW2 2564 aaPredicted RBP11.43□□□□□ -0.58
GGA3-217ENST00000583667 AIM2O14862 343 aa11.42□□□□□ -0.58
GGA3-217ENST00000583667 EEDO75530 441 aaKnown RBP11.42□□□□□ -0.58
GGA3-217ENST00000583667 IL6P05231 212 aa11.42□□□□□ -0.58
GGA3-217ENST00000583667 NME1P15531 152 aaKnown RBP11.42□□□□□ -0.58
GGA3-217ENST00000583667 ELAVL4P26378 380 aaKnown RBP11.42□□□□□ -0.58
GGA3-217ENST00000583667 RXRGP48443 463 aa11.42□□□□□ -0.58
GGA3-217ENST00000583667 MTTPP55157 894 aa11.42□□□□□ -0.58
GGA3-217ENST00000583667 UFM1P61960 85 aa11.42□□□□□ -0.58
GGA3-217ENST00000583667 RPL38P63173 70 aaKnown RBP11.42□□□□□ -0.58
GGA3-217ENST00000583667 UBE2IP63279 158 aaKnown RBP11.42□□□□□ -0.58
GGA3-217ENST00000583667 MXRA7P84157 204 aa11.42□□□□□ -0.58
GGA3-217ENST00000583667 REEP5Q00765 189 aa11.42□□□□□ -0.58
GGA3-217ENST00000583667 ART3Q13508 389 aa11.42□□□□□ -0.58
GGA3-217ENST00000583667 SLBPQ14493 270 aaKnown RBP eCLIP11.42□□□□□ -0.58
GGA3-217ENST00000583667 KIR2DS3Q14952 304 aa11.42□□□□□ -0.58
GGA3-217ENST00000583667 SPIN4Q56A73 249 aa11.42□□□□□ -0.58
GGA3-217ENST00000583667 THEMIS2Q5TEJ8 643 aa11.42□□□□□ -0.58
GGA3-217ENST00000583667 NOXRED1Q6NXP6 359 aa11.42□□□□□ -0.58
GGA3-217ENST00000583667 DUS1LQ6P1R4 473 aaKnown RBP11.42□□□□□ -0.58
GGA3-217ENST00000583667 PRMT9Q6P2P2 845 aa11.42□□□□□ -0.58
GGA3-217ENST00000583667 CYB5D1Q6P9G0 228 aa11.42□□□□□ -0.58
GGA3-217ENST00000583667 RD3Q7Z3Z2 195 aa11.42□□□□□ -0.58
GGA3-217ENST00000583667 NET1Q7Z628 596 aaPredicted RBP11.42□□□□□ -0.58
GGA3-217ENST00000583667 AMIGO1Q86WK6 493 aa11.42□□□□□ -0.58
GGA3-217ENST00000583667 PTRH1Q86Y79 214 aaKnown RBP11.42□□□□□ -0.58
GGA3-217ENST00000583667 SCUBE1Q8IWY4 988 aa11.42□□□□□ -0.58
GGA3-217ENST00000583667 RIMKLAQ8IXN7 391 aa11.42□□□□□ -0.58
GGA3-217ENST00000583667 PHACTR4Q8IZ21 702 aa11.42□□□□□ -0.58
GGA3-217ENST00000583667 OR9I1Q8NGQ6 314 aa11.42□□□□□ -0.58
GGA3-217ENST00000583667 DNAJB8Q8NHS0 232 aa11.42□□□□□ -0.58
GGA3-217ENST00000583667 CCL4L1Q8NHW4 92 aa11.42□□□□□ -0.58
GGA3-217ENST00000583667 SH3KBP1Q96B97 665 aa11.42□□□□□ -0.58
GGA3-217ENST00000583667 TESCQ96BS2 214 aa11.42□□□□□ -0.58
GGA3-217ENST00000583667 MTFMTQ96DP5 389 aaKnown RBP11.42□□□□□ -0.58
GGA3-217ENST00000583667 SPDL1Q96EA4 605 aa11.42□□□□□ -0.58
GGA3-217ENST00000583667 TMEM74Q96NL1 305 aa11.42□□□□□ -0.58
GGA3-217ENST00000583667 HBEGFQ99075 208 aa11.42□□□□□ -0.58
GGA3-217ENST00000583667 SERPINI1Q99574 410 aa11.42□□□□□ -0.58
GGA3-217ENST00000583667 GPATCH1Q9BRR8 931 aaKnown RBP11.42□□□□□ -0.58
GGA3-217ENST00000583667 THTPAQ9BU02 230 aa11.42□□□□□ -0.58
GGA3-217ENST00000583667 AASDHPPTQ9NRN7 309 aa11.42□□□□□ -0.58
GGA3-217ENST00000583667 GID8Q9NWU2 228 aa11.42□□□□□ -0.58
GGA3-217ENST00000583667 TAAR2Q9P1P5 351 aa11.42□□□□□ -0.58
GGA3-217ENST00000583667 PLAGL1Q9UM63 463 aa11.42□□□□□ -0.58
GGA3-217ENST00000583667 SATB2Q9UPW6 733 aa11.42□□□□□ -0.58
GGA3-217ENST00000583667 SH2B3Q9UQQ2 575 aa11.42□□□□□ -0.58
GGA3-217ENST00000583667 WBP11Q9Y2W2 641 aaKnown RBP11.42□□□□□ -0.58
GGA3-217ENST00000583667 ARID1BQ8NFD5 2236 aaPredicted RBP11.41□□□□□ -0.58
GGA3-217ENST00000583667 LRP4O75096 1905 aa11.41□□□□□ -0.58
GGA3-217ENST00000583667 MAGEB17A8MXT2 336 aa11.41□□□□□ -0.58
GGA3-217ENST00000583667 CDRT15L2A8MXV6 281 aa11.41□□□□□ -0.58
GGA3-217ENST00000583667 TRIM38O00635 465 aa11.41□□□□□ -0.58
GGA3-217ENST00000583667 MRASO14807 208 aa11.41□□□□□ -0.58
GGA3-217ENST00000583667 CFLARO15519 480 aa11.41□□□□□ -0.58
GGA3-217ENST00000583667 SIGLEC6O43699 453 aa11.41□□□□□ -0.58
GGA3-217ENST00000583667 SEMA3DO95025 777 aa11.41□□□□□ -0.58
GGA3-217ENST00000583667 CDH1P12830 882 aa11.41□□□□□ -0.58
GGA3-217ENST00000583667 CAPN3P20807 821 aa11.41□□□□□ -0.58
GGA3-217ENST00000583667 IL12AP29459 219 aa11.41□□□□□ -0.58
GGA3-217ENST00000583667 NUDT2P50583 147 aa11.41□□□□□ -0.58
GGA3-217ENST00000583667 CLNS1AP54105 237 aaKnown RBP11.41□□□□□ -0.58
GGA3-217ENST00000583667 KCNK10P57789 538 aa11.41□□□□□ -0.58
GGA3-217ENST00000583667 NXPH1P58417 271 aa11.41□□□□□ -0.58
GGA3-217ENST00000583667 CSNK1G2P78368 415 aa11.41□□□□□ -0.58
GGA3-217ENST00000583667 PHEXP78562 749 aa11.41□□□□□ -0.58
GGA3-217ENST00000583667 TBR1Q16650 682 aa11.41□□□□□ -0.58
GGA3-217ENST00000583667 TRMT5Q32P41 509 aaKnown RBP11.41□□□□□ -0.58
GGA3-217ENST00000583667 MMEL1Q495T6 779 aa11.41□□□□□ -0.58
GGA3-217ENST00000583667 C3orf38Q5JPI3 329 aa11.41□□□□□ -0.58
GGA3-217ENST00000583667 REP15Q6BDI9 236 aa11.41□□□□□ -0.58
GGA3-217ENST00000583667 SLC30A9Q6PML9 568 aa11.41□□□□□ -0.58
GGA3-217ENST00000583667 MSANTD1Q6ZTZ1 278 aa11.41□□□□□ -0.58
GGA3-217ENST00000583667 RETREG3Q86VR2 466 aa11.41□□□□□ -0.58
GGA3-217ENST00000583667 C17orf82Q86X59 251 aaPredicted RBP11.41□□□□□ -0.58
GGA3-217ENST00000583667 ULK2Q8IYT8 1036 aa11.41□□□□□ -0.58
GGA3-217ENST00000583667 DEFB107AQ8IZN7 70 aa11.41□□□□□ -0.58
GGA3-217ENST00000583667 FBXW8Q8N3Y1 598 aa11.41□□□□□ -0.58
GGA3-217ENST00000583667 TTLQ8NG68 377 aa11.41□□□□□ -0.58
GGA3-217ENST00000583667 PUM2Q8TB72 1066 aaKnown RBP eCLIP11.41□□□□□ -0.58
GGA3-217ENST00000583667 LCN9Q8WX39 176 aa11.41□□□□□ -0.58
GGA3-217ENST00000583667 STARD8Q92502 1023 aa11.41□□□□□ -0.58
GGA3-217ENST00000583667 CXorf40BQ96DE9 158 aa11.41□□□□□ -0.58
GGA3-217ENST00000583667 APIPQ96GX9 242 aa11.41□□□□□ -0.58
GGA3-217ENST00000583667 TEX37Q96LM6 180 aa11.41□□□□□ -0.58
GGA3-217ENST00000583667 ZBTB18Q99592 522 aa11.41□□□□□ -0.58
GGA3-217ENST00000583667 C1orf50Q9BV19 199 aa11.41□□□□□ -0.58
GGA3-217ENST00000583667 ERVMER34-1Q9H9K5 563 aa11.41□□□□□ -0.58
GGA3-217ENST00000583667 UCK1Q9HA47 277 aa11.41□□□□□ -0.58
GGA3-217ENST00000583667 WDR41Q9HAD4 459 aa11.41□□□□□ -0.58
GGA3-217ENST00000583667 DMRT3Q9NQL9 472 aa11.41□□□□□ -0.58
GGA3-217ENST00000583667 TAC3Q9UHF0 121 aa11.41□□□□□ -0.58
GGA3-217ENST00000583667 SLC7A8Q9UHI5 535 aa11.41□□□□□ -0.58
GGA3-217ENST00000583667 LEF1Q9UJU2 399 aaPredicted RBP11.41□□□□□ -0.58
GGA3-217ENST00000583667 CROTQ9UKG9 612 aa11.41□□□□□ -0.58
GGA3-217ENST00000583667 PRDM4Q9UKN5 801 aa11.41□□□□□ -0.58
GGA3-217ENST00000583667 ATXN7L1Q9ULK2 861 aaPredicted RBP11.41□□□□□ -0.58
GGA3-217ENST00000583667 SNX7Q9UNH6 387 aa11.41□□□□□ -0.58
GGA3-217ENST00000583667 ENTPD2Q9Y5L3 495 aa11.41□□□□□ -0.58
GGA3-217ENST00000583667 CSMD1Q96PZ7 3565 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms