RNA–Protein interactions for RNA: ENST00000582955.5

SMARCE1-218, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 621 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-218ENST00000582955 TLN1Q9Y490 2541 aaKnown RBP11.9□□□□□ -0.5
SMARCE1-218ENST00000582955 NSG1A0A0A6YYJ2 146 aa11.9□□□□□ -0.5
SMARCE1-218ENST00000582955 LRIT2A6NDA9 550 aa11.9□□□□□ -0.5
SMARCE1-218ENST00000582955 C4orf51C9J302 202 aa11.9□□□□□ -0.5
SMARCE1-218ENST00000582955 PCDH17O14917 1159 aa11.9□□□□□ -0.5
SMARCE1-218ENST00000582955 CHST10O43529 356 aa11.9□□□□□ -0.5
SMARCE1-218ENST00000582955 SLC28A2O43868 658 aa11.9□□□□□ -0.5
SMARCE1-218ENST00000582955 DNAJB6O75190 326 aa11.9□□□□□ -0.5
SMARCE1-218ENST00000582955 CDC123O75794 336 aaPredicted RBP11.9□□□□□ -0.5
SMARCE1-218ENST00000582955 WFS1O76024 890 aa11.9□□□□□ -0.5
SMARCE1-218ENST00000582955 HPP00738 406 aa11.9□□□□□ -0.5
SMARCE1-218ENST00000582955 C8orf89P0DMQ9 161 aa11.9□□□□□ -0.5
SMARCE1-218ENST00000582955 SMIM10L1P0DMW3 83 aa11.9□□□□□ -0.5
SMARCE1-218ENST00000582955 HNRNPH1P31943 449 aaKnown RBP11.9□□□□□ -0.5
SMARCE1-218ENST00000582955 CASP2P42575 452 aa11.9□□□□□ -0.5
SMARCE1-218ENST00000582955 EFNA3P52797 238 aa11.9□□□□□ -0.5
SMARCE1-218ENST00000582955 BTN3A2P78410 334 aa11.9□□□□□ -0.5
SMARCE1-218ENST00000582955 DDX39BQ13838 428 aaKnown RBP11.9□□□□□ -0.5
SMARCE1-218ENST00000582955 MYBPC3Q14896 1274 aa11.9□□□□□ -0.5
SMARCE1-218ENST00000582955 COLEC12Q5KU26 742 aa11.9□□□□□ -0.5
SMARCE1-218ENST00000582955 NUP210LQ5VU65 1888 aa11.9□□□□□ -0.5
SMARCE1-218ENST00000582955 GRHL2Q6ISB3 625 aa11.9□□□□□ -0.5
SMARCE1-218ENST00000582955 TRIM40Q6P9F5 258 aa11.9□□□□□ -0.5
SMARCE1-218ENST00000582955 GOLGA7Q7Z5G4 137 aa11.9□□□□□ -0.5
SMARCE1-218ENST00000582955 VN1R5Q7Z5H4 357 aa11.9□□□□□ -0.5
SMARCE1-218ENST00000582955 PARP9Q8IXQ6 854 aa11.9□□□□□ -0.5
SMARCE1-218ENST00000582955 CNPY4Q8N129 248 aa11.9□□□□□ -0.5
SMARCE1-218ENST00000582955 ACMSDQ8TDX5 336 aa11.9□□□□□ -0.5
SMARCE1-218ENST00000582955 ATP6V1E2Q96A05 226 aa11.9□□□□□ -0.5
SMARCE1-218ENST00000582955 TBC1D20Q96BZ9 403 aa11.9□□□□□ -0.5
SMARCE1-218ENST00000582955 MS4A6EQ96DS6 147 aa11.9□□□□□ -0.5
SMARCE1-218ENST00000582955 SMIM10Q96HG1 83 aa11.9□□□□□ -0.5
SMARCE1-218ENST00000582955 REXO4Q9GZR2 422 aaKnown RBP11.9□□□□□ -0.5
SMARCE1-218ENST00000582955 AICDAQ9GZX7 198 aa11.9□□□□□ -0.5
SMARCE1-218ENST00000582955 RHBGQ9H310 441 aa11.9□□□□□ -0.5
SMARCE1-218ENST00000582955 IPPKQ9H8X2 491 aa11.9□□□□□ -0.5
SMARCE1-218ENST00000582955 ZNF451Q9Y4E5 1061 aa11.9□□□□□ -0.5
SMARCE1-218ENST00000582955 SPTA1P02549 2419 aa11.89□□□□□ -0.51
SMARCE1-218ENST00000582955 TNRC6AQ8NDV7 1962 aaKnown RBP11.89□□□□□ -0.51
SMARCE1-218ENST00000582955 A0A088AWK7 358 aa11.89□□□□□ -0.51
SMARCE1-218ENST00000582955 OR2W5A6NFC9 320 aa11.89□□□□□ -0.51
SMARCE1-218ENST00000582955 STX16-NPEPL1H3BU86 382 aa11.89□□□□□ -0.51
SMARCE1-218ENST00000582955 PSMD12O00232 456 aaPredicted RBP11.89□□□□□ -0.51
SMARCE1-218ENST00000582955 E2F3O00716 465 aa11.89□□□□□ -0.51
SMARCE1-218ENST00000582955 STX16O14662 325 aa11.89□□□□□ -0.51
SMARCE1-218ENST00000582955 KLHL41O60662 606 aa11.89□□□□□ -0.51
SMARCE1-218ENST00000582955 B4GALT2O60909 372 aa11.89□□□□□ -0.51
SMARCE1-218ENST00000582955 ALPPP05187 535 aa11.89□□□□□ -0.51
SMARCE1-218ENST00000582955 FHP07954 510 aa11.89□□□□□ -0.51
SMARCE1-218ENST00000582955 PYGBP11216 843 aa11.89□□□□□ -0.51
SMARCE1-218ENST00000582955 COX6A1P12074 109 aa11.89□□□□□ -0.51
SMARCE1-218ENST00000582955 KRT15P19012 456 aa11.89□□□□□ -0.51
SMARCE1-218ENST00000582955 TAC1P20366 129 aa11.89□□□□□ -0.51
SMARCE1-218ENST00000582955 ZNF10P21506 573 aaPredicted RBP11.89□□□□□ -0.51
SMARCE1-218ENST00000582955 IL10P22301 178 aa11.89□□□□□ -0.51
SMARCE1-218ENST00000582955 JAK1P23458 1154 aa11.89□□□□□ -0.51
SMARCE1-218ENST00000582955 HSD17B3P37058 310 aa11.89□□□□□ -0.51
SMARCE1-218ENST00000582955 PLA2G16P53816 162 aa11.89□□□□□ -0.51
SMARCE1-218ENST00000582955 TGM3Q08188 693 aa11.89□□□□□ -0.51
SMARCE1-218ENST00000582955 KLRB1Q12918 225 aa11.89□□□□□ -0.51
SMARCE1-218ENST00000582955 E2F2Q14209 437 aa11.89□□□□□ -0.51
SMARCE1-218ENST00000582955 VWA5B1Q5TIE3 1220 aa11.89□□□□□ -0.51
SMARCE1-218ENST00000582955 METTL2BQ6P1Q9 378 aaKnown RBP11.89□□□□□ -0.51
SMARCE1-218ENST00000582955 LANCL3Q6ZV70 420 aa11.89□□□□□ -0.51
SMARCE1-218ENST00000582955 NDUFAF7Q7L592 441 aa11.89□□□□□ -0.51
SMARCE1-218ENST00000582955 LCA5Q86VQ0 697 aa11.89□□□□□ -0.51
SMARCE1-218ENST00000582955 OR2L5Q8NG80 312 aa11.89□□□□□ -0.51
SMARCE1-218ENST00000582955 OR7G3Q8NG95 312 aa11.89□□□□□ -0.51
SMARCE1-218ENST00000582955 EPS8L3Q8TE67 593 aaKnown RBP11.89□□□□□ -0.51
SMARCE1-218ENST00000582955 THOC3Q96J01 351 aaKnown RBP11.89□□□□□ -0.51
SMARCE1-218ENST00000582955 OR1F2PQ96R84 312 aa11.89□□□□□ -0.51
SMARCE1-218ENST00000582955 F2RL3Q96RI0 385 aa11.89□□□□□ -0.51
SMARCE1-218ENST00000582955 NOL11Q9H8H0 719 aaKnown RBP11.89□□□□□ -0.51
SMARCE1-218ENST00000582955 COPS7BQ9H9Q2 264 aaPredicted RBP11.89□□□□□ -0.51
SMARCE1-218ENST00000582955 PPCSQ9HAB8 311 aa11.89□□□□□ -0.51
SMARCE1-218ENST00000582955 MLXIPLQ9NP71 852 aa11.89□□□□□ -0.51
SMARCE1-218ENST00000582955 RIC8BQ9NVN3 520 aa11.89□□□□□ -0.51
SMARCE1-218ENST00000582955 TMEM216Q9P0N5 145 aa11.89□□□□□ -0.51
SMARCE1-218ENST00000582955 C19orf25Q9UFG5 118 aaPredicted RBP11.89□□□□□ -0.51
SMARCE1-218ENST00000582955 ANAPC2Q9UJX6 822 aa11.89□□□□□ -0.51
SMARCE1-218ENST00000582955 PCDHGB7Q9Y5F8 929 aa11.89□□□□□ -0.51
SMARCE1-218ENST00000582955 LOC102723996A0A087X1L8 192 aa11.88□□□□□ -0.51
SMARCE1-218ENST00000582955 IGHV1-45A0A0A0MS14 117 aa11.88□□□□□ -0.51
SMARCE1-218ENST00000582955 IGHV3-20A0A0C4DH32 117 aa11.88□□□□□ -0.51
SMARCE1-218ENST00000582955 A0A1W2PPM1 405 aa11.88□□□□□ -0.51
SMARCE1-218ENST00000582955 A8MT66 165 aa11.88□□□□□ -0.51
SMARCE1-218ENST00000582955 SUV39H1O43463 412 aa11.88□□□□□ -0.51
SMARCE1-218ENST00000582955 B3GALT2O43825 422 aa11.88□□□□□ -0.51
SMARCE1-218ENST00000582955 SH3BGRLO75368 114 aa11.88□□□□□ -0.51
SMARCE1-218ENST00000582955 TGFB1P01137 390 aa11.88□□□□□ -0.51
SMARCE1-218ENST00000582955 UQCRHP07919 91 aa11.88□□□□□ -0.51
SMARCE1-218ENST00000582955 CYC1P08574 325 aa11.88□□□□□ -0.51
SMARCE1-218ENST00000582955 RNH1P13489 461 aaKnown RBP11.88□□□□□ -0.51
SMARCE1-218ENST00000582955 SERPINB1P30740 379 aa11.88□□□□□ -0.51
SMARCE1-218ENST00000582955 CCNG1P51959 295 aa11.88□□□□□ -0.51
SMARCE1-218ENST00000582955 PHEXP78562 749 aa11.88□□□□□ -0.51
SMARCE1-218ENST00000582955 PCDH1Q08174 1060 aa11.88□□□□□ -0.51
SMARCE1-218ENST00000582955 ABRAXAS2Q15018 415 aa11.88□□□□□ -0.51
SMARCE1-218ENST00000582955 CPSF6Q16630 551 aaKnown RBP eCLIP11.88□□□□□ -0.51
SMARCE1-218ENST00000582955 ERCC6LQ2NKX8 1250 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms