RNA–Protein interactions for RNA: ENST00000582885.1

CCDC57-216, Transcript of coiled-coil domain containing 57, humanhuman

TSL 3

Gene CCDC57, Length 537 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC57-216ENST00000582885 OR8K5Q8NH50 307 aa11.43□□□□□ -0.58
CCDC57-216ENST00000582885 UTP15Q8TED0 518 aaKnown RBP11.43□□□□□ -0.58
CCDC57-216ENST00000582885 NMUR2Q9GZQ4 415 aa11.43□□□□□ -0.58
CCDC57-216ENST00000582885 KLHL31Q9H511 634 aa11.43□□□□□ -0.58
CCDC57-216ENST00000582885 SYNDIG1Q9H7V2 258 aa11.43□□□□□ -0.58
CCDC57-216ENST00000582885 FANCEQ9HB96 536 aa11.43□□□□□ -0.58
CCDC57-216ENST00000582885 PRM3Q9NNZ6 103 aa11.43□□□□□ -0.58
CCDC57-216ENST00000582885 PRDM7Q9NQW5 492 aa11.43□□□□□ -0.58
CCDC57-216ENST00000582885 TOR4AQ9NXH8 423 aa11.43□□□□□ -0.58
CCDC57-216ENST00000582885 SIDT1Q9NXL6 827 aaKnown RBP11.43□□□□□ -0.58
CCDC57-216ENST00000582885 SERTAD3Q9UJW9 196 aa11.43□□□□□ -0.58
CCDC57-216ENST00000582885 MAPRE3Q9UPY8 281 aa11.43□□□□□ -0.58
CCDC57-216ENST00000582885 A0A088AWK7 358 aa11.42□□□□□ -0.58
CCDC57-216ENST00000582885 ERI3O43414 337 aaKnown RBP11.42□□□□□ -0.58
CCDC57-216ENST00000582885 PCDH7O60245 1069 aa11.42□□□□□ -0.58
CCDC57-216ENST00000582885 PRMT3O60678 531 aa11.42□□□□□ -0.58
CCDC57-216ENST00000582885 G6PDP11413 515 aa11.42□□□□□ -0.58
CCDC57-216ENST00000582885 BCKDHAP12694 445 aa11.42□□□□□ -0.58
CCDC57-216ENST00000582885 FOLR1P15328 257 aa11.42□□□□□ -0.58
CCDC57-216ENST00000582885 SDC1P18827 310 aa11.42□□□□□ -0.58
CCDC57-216ENST00000582885 ZNF10P21506 573 aaPredicted RBP11.42□□□□□ -0.58
CCDC57-216ENST00000582885 ASMTP46597 345 aa11.42□□□□□ -0.58
CCDC57-216ENST00000582885 DIO3P55073 304 aa11.42□□□□□ -0.58
CCDC57-216ENST00000582885 C21orf58P58505 322 aa11.42□□□□□ -0.58
CCDC57-216ENST00000582885 STX1BP61266 288 aa11.42□□□□□ -0.58
CCDC57-216ENST00000582885 TRA2BP62995 288 aaKnown RBP11.42□□□□□ -0.58
CCDC57-216ENST00000582885 INSM1Q01101 510 aaPredicted RBP11.42□□□□□ -0.58
CCDC57-216ENST00000582885 FAM53BQ14153 422 aa11.42□□□□□ -0.58
CCDC57-216ENST00000582885 GRM7Q14831 915 aa11.42□□□□□ -0.58
CCDC57-216ENST00000582885 HKDC1Q2TB90 917 aa11.42□□□□□ -0.58
CCDC57-216ENST00000582885 DEFB110Q30KQ9 67 aa11.42□□□□□ -0.58
CCDC57-216ENST00000582885 FAM214AQ32MH5 1076 aa11.42□□□□□ -0.58
CCDC57-216ENST00000582885 TLDC1Q6P9B6 456 aa11.42□□□□□ -0.58
CCDC57-216ENST00000582885 C6orf89Q6UWU4 347 aa11.42□□□□□ -0.58
CCDC57-216ENST00000582885 ABHD13Q7L211 337 aa11.42□□□□□ -0.58
CCDC57-216ENST00000582885 TRPM8Q7Z2W7 1104 aa11.42□□□□□ -0.58
CCDC57-216ENST00000582885 CLNKQ7Z7G1 428 aa11.42□□□□□ -0.58
CCDC57-216ENST00000582885 CACTIN-AS1Q8N1I8 211 aa11.42□□□□□ -0.58
CCDC57-216ENST00000582885 MIER2Q8N344 545 aa11.42□□□□□ -0.58
CCDC57-216ENST00000582885 ZCCHC7Q8N3Z6 543 aaKnown RBP11.42□□□□□ -0.58
CCDC57-216ENST00000582885 FITM2Q8N6M3 262 aa11.42□□□□□ -0.58
CCDC57-216ENST00000582885 PUM2Q8TB72 1066 aaKnown RBP eCLIP11.42□□□□□ -0.58
CCDC57-216ENST00000582885 N4BP2L2Q92802 583 aaPredicted RBP11.42□□□□□ -0.58
CCDC57-216ENST00000582885 ZNF501Q96CX3 271 aaPredicted RBP11.42□□□□□ -0.58
CCDC57-216ENST00000582885 CATSPER2Q96P56 530 aa11.42□□□□□ -0.58
CCDC57-216ENST00000582885 C1orf50Q9BV19 199 aa11.42□□□□□ -0.58
CCDC57-216ENST00000582885 CCDC106Q9BWC9 280 aa11.42□□□□□ -0.58
CCDC57-216ENST00000582885 CLK4Q9HAZ1 481 aaKnown RBP11.42□□□□□ -0.58
CCDC57-216ENST00000582885 LHX9Q9NQ69 397 aa11.42□□□□□ -0.58
CCDC57-216ENST00000582885 FGF21Q9NSA1 209 aa11.42□□□□□ -0.58
CCDC57-216ENST00000582885 ZIM2Q9NZV7 527 aa11.42□□□□□ -0.58
CCDC57-216ENST00000582885 DLGAP4Q9Y2H0 992 aa11.42□□□□□ -0.58
CCDC57-216ENST00000582885 COPG1Q9Y678 874 aaKnown RBP11.42□□□□□ -0.58
CCDC57-216ENST00000582885 CEP250Q9BV73 2442 aa11.42□□□□□ -0.58
CCDC57-216ENST00000582885 NUP214P35658 2090 aaPredicted RBP11.42□□□□□ -0.58
CCDC57-216ENST00000582885 CNOT1A5YKK6 2376 aaKnown RBP11.41□□□□□ -0.58
CCDC57-216ENST00000582885 A0A0A6YYD5 115 aa11.41□□□□□ -0.58
CCDC57-216ENST00000582885 HYKKA2RU49 373 aa11.41□□□□□ -0.58
CCDC57-216ENST00000582885 CCT8L1PA6NM43 557 aa11.41□□□□□ -0.58
CCDC57-216ENST00000582885 SAP18O00422 153 aaKnown RBP11.41□□□□□ -0.58
CCDC57-216ENST00000582885 ANKRD28O15084 1053 aa11.41□□□□□ -0.58
CCDC57-216ENST00000582885 SH3BGRLO75368 114 aa11.41□□□□□ -0.58
CCDC57-216ENST00000582885 OR2B3O76000 313 aa11.41□□□□□ -0.58
CCDC57-216ENST00000582885 EIF2S1P05198 315 aaKnown RBP11.41□□□□□ -0.58
CCDC57-216ENST00000582885 ANXA4P09525 319 aaPredicted RBP11.41□□□□□ -0.58
CCDC57-216ENST00000582885 ZNF888P0CJ79 500 aaPredicted RBP11.41□□□□□ -0.58
CCDC57-216ENST00000582885 ALOX12P18054 663 aa11.41□□□□□ -0.58
CCDC57-216ENST00000582885 GPX3P22352 226 aa11.41□□□□□ -0.58
CCDC57-216ENST00000582885 HIST1H1TP22492 207 aaPredicted RBP11.41□□□□□ -0.58
CCDC57-216ENST00000582885 JAK1P23458 1154 aa11.41□□□□□ -0.58
CCDC57-216ENST00000582885 ATP5A1P25705 553 aaKnown RBP11.41□□□□□ -0.58
CCDC57-216ENST00000582885 TPP2P29144 1249 aaPredicted RBP11.41□□□□□ -0.58
CCDC57-216ENST00000582885 CSTF2P33240 577 aaKnown RBP eCLIP11.41□□□□□ -0.58
CCDC57-216ENST00000582885 SSR2P43308 183 aa11.41□□□□□ -0.58
CCDC57-216ENST00000582885 GCGRP47871 477 aa11.41□□□□□ -0.58
CCDC57-216ENST00000582885 PDX1P52945 283 aa11.41□□□□□ -0.58
CCDC57-216ENST00000582885 PLA2G16P53816 162 aa11.41□□□□□ -0.58
CCDC57-216ENST00000582885 ITGA1P56199 1179 aa11.41□□□□□ -0.58
CCDC57-216ENST00000582885 CLDN8P56748 225 aa11.41□□□□□ -0.58
CCDC57-216ENST00000582885 SKP1P63208 163 aa11.41□□□□□ -0.58
CCDC57-216ENST00000582885 ZNF763Q0D2J5 394 aa11.41□□□□□ -0.58
CCDC57-216ENST00000582885 KLF10Q13118 480 aa11.41□□□□□ -0.58
CCDC57-216ENST00000582885 IL11RAQ14626 422 aa11.41□□□□□ -0.58
CCDC57-216ENST00000582885 KCNAB1Q14722 419 aa11.41□□□□□ -0.58
CCDC57-216ENST00000582885 HERC3Q15034 1050 aa11.41□□□□□ -0.58
CCDC57-216ENST00000582885 RPS6KA2Q15349 733 aa11.41□□□□□ -0.58
CCDC57-216ENST00000582885 GPR19Q15760 415 aa11.41□□□□□ -0.58
CCDC57-216ENST00000582885 NDUFA9Q16795 377 aa11.41□□□□□ -0.58
CCDC57-216ENST00000582885 CCNYL2Q5T2Q4 361 aa11.41□□□□□ -0.58
CCDC57-216ENST00000582885 PHF19Q5T6S3 580 aa11.41□□□□□ -0.58
CCDC57-216ENST00000582885 CYP20A1Q6UW02 462 aa11.41□□□□□ -0.58
CCDC57-216ENST00000582885 GPR135Q8IZ08 494 aa11.41□□□□□ -0.58
CCDC57-216ENST00000582885 LIX1Q8N485 282 aa11.41□□□□□ -0.58
CCDC57-216ENST00000582885 TTC29Q8NA56 475 aaPredicted RBP11.41□□□□□ -0.58
CCDC57-216ENST00000582885 AGBL5Q8NDL9 886 aa11.41□□□□□ -0.58
CCDC57-216ENST00000582885 DEFB124Q8NES8 71 aa11.41□□□□□ -0.58
CCDC57-216ENST00000582885 SERINC2Q96SA4 455 aa11.41□□□□□ -0.58
CCDC57-216ENST00000582885 MACROD1Q9BQ69 325 aa11.41□□□□□ -0.58
CCDC57-216ENST00000582885 C17orf62Q9BQA9 187 aa11.41□□□□□ -0.58
CCDC57-216ENST00000582885 NPLQ9BXD5 320 aaPredicted RBP11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms