RNA–Protein interactions for RNA: ENST00000580315.1

CDC42EP4-205, Transcript of CDC42 effector protein 4, humanhuman

TSL 2

Gene CDC42EP4, Length 1,022 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-205ENST00000580315 TM9SF4Q92544 642 aa23.47■■□□□ 1.35
CDC42EP4-205ENST00000580315 ISL2Q96A47 359 aa23.47■■□□□ 1.35
CDC42EP4-205ENST00000580315 PTCD3Q96EY7 689 aaKnown RBP23.47■■□□□ 1.35
CDC42EP4-205ENST00000580315 L2HGDHQ9H9P8 463 aa23.47■■□□□ 1.35
CDC42EP4-205ENST00000580315 OPTCQ9UBM4 332 aa23.47■■□□□ 1.35
CDC42EP4-205ENST00000580315 NSG1A0A0A6YYJ2 146 aa23.46■■□□□ 1.35
CDC42EP4-205ENST00000580315 ZNF860A6NHJ4 632 aa23.46■■□□□ 1.35
CDC42EP4-205ENST00000580315 ANKDD1BA6NHY2 528 aa23.46■■□□□ 1.35
CDC42EP4-205ENST00000580315 ALOX12BO75342 701 aa23.46■■□□□ 1.35
CDC42EP4-205ENST00000580315 CBX6O95503 412 aa23.46■■□□□ 1.35
CDC42EP4-205ENST00000580315 C8orf89P0DMQ9 161 aa23.46■■□□□ 1.35
CDC42EP4-205ENST00000580315 GFAPP14136 432 aa23.46■■□□□ 1.35
CDC42EP4-205ENST00000580315 HPDP32754 393 aaPredicted RBP23.46■■□□□ 1.35
CDC42EP4-205ENST00000580315 HNF4AP41235 474 aa23.46■■□□□ 1.35
CDC42EP4-205ENST00000580315 IRF8Q02556 426 aa23.46■■□□□ 1.35
CDC42EP4-205ENST00000580315 NR6A1Q15406 480 aa23.46■■□□□ 1.35
CDC42EP4-205ENST00000580315 HIST2H2ACQ16777 129 aaPredicted RBP23.46■■□□□ 1.35
CDC42EP4-205ENST00000580315 HIST2H2AA3Q6FI13 130 aa23.46■■□□□ 1.35
CDC42EP4-205ENST00000580315 MAMDC2Q7Z304 686 aaPredicted RBP23.46■■□□□ 1.35
CDC42EP4-205ENST00000580315 PARP9Q8IXQ6 854 aa23.46■■□□□ 1.35
CDC42EP4-205ENST00000580315 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP23.46■■□□□ 1.35
CDC42EP4-205ENST00000580315 IQCKQ8N0W5 287 aa23.46■■□□□ 1.35
CDC42EP4-205ENST00000580315 UTP15Q8TED0 518 aaKnown RBP23.46■■□□□ 1.35
CDC42EP4-205ENST00000580315 CREB3L4Q8TEY5 395 aa23.46■■□□□ 1.35
CDC42EP4-205ENST00000580315 CCT6BQ92526 530 aa23.46■■□□□ 1.35
CDC42EP4-205ENST00000580315 WDR34Q96EX3 536 aa23.46■■□□□ 1.35
CDC42EP4-205ENST00000580315 OR1F2PQ96R84 312 aa23.46■■□□□ 1.35
CDC42EP4-205ENST00000580315 LHPPQ9H008 270 aa23.46■■□□□ 1.35
CDC42EP4-205ENST00000580315 ZNF552Q9H707 407 aaPredicted RBP23.46■■□□□ 1.35
CDC42EP4-205ENST00000580315 CLK4Q9HAZ1 481 aaKnown RBP23.46■■□□□ 1.35
CDC42EP4-205ENST00000580315 ZNF160Q9HCG1 818 aa23.46■■□□□ 1.35
CDC42EP4-205ENST00000580315 ASF1BQ9NVP2 202 aa23.46■■□□□ 1.35
CDC42EP4-205ENST00000580315 COPG2Q9UBF2 871 aa23.46■■□□□ 1.35
CDC42EP4-205ENST00000580315 C19orf25Q9UFG5 118 aaPredicted RBP23.46■■□□□ 1.35
CDC42EP4-205ENST00000580315 ERRFI1Q9UJM3 462 aaPredicted RBP23.46■■□□□ 1.35
CDC42EP4-205ENST00000580315 B3GNT3Q9Y2A9 372 aa23.46■■□□□ 1.35
CDC42EP4-205ENST00000580315 K7EPI3 171 aa23.45■■□□□ 1.34
CDC42EP4-205ENST00000580315 JRKO75564 520 aa23.45■■□□□ 1.34
CDC42EP4-205ENST00000580315 MAGEA12P43365 314 aa23.45■■□□□ 1.34
CDC42EP4-205ENST00000580315 RAB8AP61006 207 aa23.45■■□□□ 1.34
CDC42EP4-205ENST00000580315 EEF1A2Q05639 463 aaKnown RBP23.45■■□□□ 1.34
CDC42EP4-205ENST00000580315 DOC2AQ14183 400 aa23.45■■□□□ 1.34
CDC42EP4-205ENST00000580315 TOR1AIP1Q5JTV8 583 aa23.45■■□□□ 1.34
CDC42EP4-205ENST00000580315 TMEM205Q6UW68 189 aa23.45■■□□□ 1.34
CDC42EP4-205ENST00000580315 CISD2Q8N5K1 135 aaKnown RBP23.45■■□□□ 1.34
CDC42EP4-205ENST00000580315 DCAKDQ8WVC6 231 aa23.45■■□□□ 1.34
CDC42EP4-205ENST00000580315 VN1R1Q9GZP7 353 aa23.45■■□□□ 1.34
CDC42EP4-205ENST00000580315 RIC8BQ9NVN3 520 aa23.45■■□□□ 1.34
CDC42EP4-205ENST00000580315 ANGPTL3Q9Y5C1 460 aa23.45■■□□□ 1.34
CDC42EP4-205ENST00000580315 A0A1W2PQ72 361 aa23.44■■□□□ 1.34
CDC42EP4-205ENST00000580315 TRIM49D1C9J1S8 452 aa23.44■■□□□ 1.34
CDC42EP4-205ENST00000580315 RIPK2O43353 540 aa23.44■■□□□ 1.34
CDC42EP4-205ENST00000580315 CLEC3AO75596 197 aa23.44■■□□□ 1.34
CDC42EP4-205ENST00000580315 CLDN1O95832 211 aa23.44■■□□□ 1.34
CDC42EP4-205ENST00000580315 LDLRP01130 860 aa23.44■■□□□ 1.34
CDC42EP4-205ENST00000580315 SNRPAP09012 282 aaKnown RBP23.44■■□□□ 1.34
CDC42EP4-205ENST00000580315 COX6A1P12074 109 aa23.44■■□□□ 1.34
CDC42EP4-205ENST00000580315 MTHFD2P13995 350 aa23.44■■□□□ 1.34
CDC42EP4-205ENST00000580315 EPB42P16452 691 aa23.44■■□□□ 1.34
CDC42EP4-205ENST00000580315 COL8A1P27658 744 aa23.44■■□□□ 1.34
CDC42EP4-205ENST00000580315 AGTR2P50052 363 aa23.44■■□□□ 1.34
CDC42EP4-205ENST00000580315 CHIT1Q13231 466 aa23.44■■□□□ 1.34
CDC42EP4-205ENST00000580315 TBCCQ15814 346 aa23.44■■□□□ 1.34
CDC42EP4-205ENST00000580315 TSNAXIP1Q2TAA8 658 aa23.44■■□□□ 1.34
CDC42EP4-205ENST00000580315 TEX35Q5T0J7 233 aa23.44■■□□□ 1.34
CDC42EP4-205ENST00000580315 AGAP7PQ5VUJ5 663 aa23.44■■□□□ 1.34
CDC42EP4-205ENST00000580315 ZNF787Q6DD87 383 aa23.44■■□□□ 1.34
CDC42EP4-205ENST00000580315 KBTBD2Q8IY47 623 aa23.44■■□□□ 1.34
CDC42EP4-205ENST00000580315 EIF1ADQ8N9N8 165 aaKnown RBP23.44■■□□□ 1.34
CDC42EP4-205ENST00000580315 LRRN4CLQ8ND94 238 aa23.44■■□□□ 1.34
CDC42EP4-205ENST00000580315 OR5T3Q8NGG3 340 aa23.44■■□□□ 1.34
CDC42EP4-205ENST00000580315 UBE2E3Q969T4 207 aa23.44■■□□□ 1.34
CDC42EP4-205ENST00000580315 PEX11GQ96HA9 241 aa23.44■■□□□ 1.34
CDC42EP4-205ENST00000580315 THOC3Q96J01 351 aaKnown RBP23.44■■□□□ 1.34
CDC42EP4-205ENST00000580315 FAR2Q96K12 515 aa23.44■■□□□ 1.34
CDC42EP4-205ENST00000580315 AGAP4Q96P64 663 aa23.44■■□□□ 1.34
CDC42EP4-205ENST00000580315 GPR78Q96P69 363 aa23.44■■□□□ 1.34
CDC42EP4-205ENST00000580315 MESP1Q9BRJ9 268 aa23.44■■□□□ 1.34
CDC42EP4-205ENST00000580315 PRM3Q9NNZ6 103 aa23.44■■□□□ 1.34
CDC42EP4-205ENST00000580315 LOC102723996A0A087X1L8 192 aa23.43■■□□□ 1.34
CDC42EP4-205ENST00000580315 IGHV1-45A0A0A0MS14 117 aa23.43■■□□□ 1.34
CDC42EP4-205ENST00000580315 RBP1P09455 135 aa23.43■■□□□ 1.34
CDC42EP4-205ENST00000580315 COL6A2P12110 1019 aa23.43■■□□□ 1.34
CDC42EP4-205ENST00000580315 JAK1P23458 1154 aa23.43■■□□□ 1.34
CDC42EP4-205ENST00000580315 ALDH18A1P54886 795 aaKnown RBP23.43■■□□□ 1.34
CDC42EP4-205ENST00000580315 AP2B1P63010 937 aa23.43■■□□□ 1.34
CDC42EP4-205ENST00000580315 HYAL2Q12891 473 aa23.43■■□□□ 1.34
CDC42EP4-205ENST00000580315 SETDB1Q15047 1291 aa23.43■■□□□ 1.34
CDC42EP4-205ENST00000580315 PFKFB4Q16877 469 aa23.43■■□□□ 1.34
CDC42EP4-205ENST00000580315 IGFL3Q6UXB1 125 aa23.43■■□□□ 1.34
CDC42EP4-205ENST00000580315 GAL3ST3Q96A11 431 aa23.43■■□□□ 1.34
CDC42EP4-205ENST00000580315 ZNF700Q9H0M5 742 aa23.43■■□□□ 1.34
CDC42EP4-205ENST00000580315 KLHL31Q9H511 634 aa23.43■■□□□ 1.34
CDC42EP4-205ENST00000580315 ASB1Q9Y576 335 aa23.43■■□□□ 1.34
CDC42EP4-205ENST00000580315 TNPO3Q9Y5L0 923 aaKnown RBP23.43■■□□□ 1.34
CDC42EP4-205ENST00000580315 CACNA1DQ01668 2161 aa23.42■■□□□ 1.34
CDC42EP4-205ENST00000580315 LRBAP50851 2863 aa23.42■■□□□ 1.34
CDC42EP4-205ENST00000580315 A0A088AWK7 358 aa23.42■■□□□ 1.34
CDC42EP4-205ENST00000580315 CHST10O43529 356 aa23.42■■□□□ 1.34
CDC42EP4-205ENST00000580315 FHP07954 510 aa23.42■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms