RNA–Protein interactions for RNA: ENST00000579743.2

GGA3-208, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 4

Gene GGA3, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-208ENST00000579743 DEFB126Q9BYW3 111 aa12.88□□□□□ -0.35
GGA3-208ENST00000579743 TRIM31Q9BZY9 425 aa12.88□□□□□ -0.35
GGA3-208ENST00000579743 PITHD1Q9GZP4 211 aaPredicted RBP12.88□□□□□ -0.35
GGA3-208ENST00000579743 RHBGQ9H310 441 aa12.88□□□□□ -0.35
GGA3-208ENST00000579743 GRPEL1Q9HAV7 217 aa12.88□□□□□ -0.35
GGA3-208ENST00000579743 ANKRD10Q9NXR5 420 aa12.88□□□□□ -0.35
GGA3-208ENST00000579743 LRFN1Q9P244 771 aa12.88□□□□□ -0.35
GGA3-208ENST00000579743 SH3BGRL2Q9UJC5 107 aa12.88□□□□□ -0.35
GGA3-208ENST00000579743 OARD1Q9Y530 152 aa12.88□□□□□ -0.35
GGA3-208ENST00000579743 CPAMD8Q8IZJ3 1885 aa12.88□□□□□ -0.35
GGA3-208ENST00000579743 CACNA1DQ01668 2161 aa12.88□□□□□ -0.35
GGA3-208ENST00000579743 UNC79Q9P2D8 2635 aa12.88□□□□□ -0.35
GGA3-208ENST00000579743 NPEPPSL1A6NEC2 478 aa12.87□□□□□ -0.35
GGA3-208ENST00000579743 ANKDD1BA6NHY2 528 aa12.87□□□□□ -0.35
GGA3-208ENST00000579743 CLGNO14967 610 aa12.87□□□□□ -0.35
GGA3-208ENST00000579743 WDR47O94967 919 aa12.87□□□□□ -0.35
GGA3-208ENST00000579743 S100BP04271 92 aaPredicted RBP12.87□□□□□ -0.35
GGA3-208ENST00000579743 SP1P08047 785 aa12.87□□□□□ -0.35
GGA3-208ENST00000579743 C1GALT1C1LP0DN25 315 aa12.87□□□□□ -0.35
GGA3-208ENST00000579743 MST1P26927 711 aa12.87□□□□□ -0.35
GGA3-208ENST00000579743 EFNA3P52797 238 aa12.87□□□□□ -0.35
GGA3-208ENST00000579743 RAB8AP61006 207 aa12.87□□□□□ -0.35
GGA3-208ENST00000579743 OLR1P78380 273 aa12.87□□□□□ -0.35
GGA3-208ENST00000579743 POU4F1Q01851 419 aa12.87□□□□□ -0.35
GGA3-208ENST00000579743 TOR1AIP1Q5JTV8 583 aa12.87□□□□□ -0.35
GGA3-208ENST00000579743 SPINK14Q6IE38 97 aa12.87□□□□□ -0.35
GGA3-208ENST00000579743 TMIGD1Q6UXZ0 262 aa12.87□□□□□ -0.35
GGA3-208ENST00000579743 TICAM1Q8IUC6 712 aa12.87□□□□□ -0.35
GGA3-208ENST00000579743 SPNS2Q8IVW8 549 aa12.87□□□□□ -0.35
GGA3-208ENST00000579743 ZBED8Q8IZ13 594 aa12.87□□□□□ -0.35
GGA3-208ENST00000579743 GHDCQ8N2G8 530 aa12.87□□□□□ -0.35
GGA3-208ENST00000579743 MDS2Q8NDY4 140 aa12.87□□□□□ -0.35
GGA3-208ENST00000579743 ELP5Q8TE02 316 aa12.87□□□□□ -0.35
GGA3-208ENST00000579743 PYROXD1Q8WU10 500 aa12.87□□□□□ -0.35
GGA3-208ENST00000579743 TSLPQ969D9 159 aa12.87□□□□□ -0.35
GGA3-208ENST00000579743 SCMH1Q96GD3 660 aa12.87□□□□□ -0.35
GGA3-208ENST00000579743 GPR137Q96N19 417 aa12.87□□□□□ -0.35
GGA3-208ENST00000579743 CCDC77Q9BR77 488 aa12.87□□□□□ -0.35
GGA3-208ENST00000579743 NPLQ9BXD5 320 aaPredicted RBP12.87□□□□□ -0.35
GGA3-208ENST00000579743 SLC6A16Q9GZN6 736 aa12.87□□□□□ -0.35
GGA3-208ENST00000579743 RHOJQ9H4E5 214 aa12.87□□□□□ -0.35
GGA3-208ENST00000579743 SLC17A6Q9P2U8 582 aa12.87□□□□□ -0.35
GGA3-208ENST00000579743 MMACHCQ9Y4U1 282 aa12.87□□□□□ -0.35
GGA3-208ENST00000579743 CREBBPQ92793 2442 aa12.86□□□□□ -0.35
GGA3-208ENST00000579743 SAGE2PA6NJ88 616 aa12.86□□□□□ -0.35
GGA3-208ENST00000579743 NPIPA5E9PKD4 350 aa12.86□□□□□ -0.35
GGA3-208ENST00000579743 CDC7O00311 574 aa12.86□□□□□ -0.35
GGA3-208ENST00000579743 B3GALT2O43825 422 aa12.86□□□□□ -0.35
GGA3-208ENST00000579743 SLC25A12O75746 678 aa12.86□□□□□ -0.35
GGA3-208ENST00000579743 ABOP16442 354 aa12.86□□□□□ -0.35
GGA3-208ENST00000579743 AGAP20933 346 aa12.86□□□□□ -0.35
GGA3-208ENST00000579743 DEKP35659 375 aaKnown RBP12.86□□□□□ -0.35
GGA3-208ENST00000579743 CLCN2P51788 898 aa12.86□□□□□ -0.35
GGA3-208ENST00000579743 SNRPNP63162 240 aaKnown RBP12.86□□□□□ -0.35
GGA3-208ENST00000579743 BTN3A2P78410 334 aa12.86□□□□□ -0.35
GGA3-208ENST00000579743 TERF2Q15554 542 aa12.86□□□□□ -0.35
GGA3-208ENST00000579743 HIST2H2ACQ16777 129 aaPredicted RBP12.86□□□□□ -0.35
GGA3-208ENST00000579743 PPP1R3AQ16821 1122 aa12.86□□□□□ -0.35
GGA3-208ENST00000579743 HIST2H2AA3Q6FI13 130 aa12.86□□□□□ -0.35
GGA3-208ENST00000579743 BNC2Q6ZN30 1099 aaPredicted RBP12.86□□□□□ -0.35
GGA3-208ENST00000579743 GALNTL5Q7Z4T8 443 aa12.86□□□□□ -0.35
GGA3-208ENST00000579743 MAATS1Q7Z4T9 603 aa12.86□□□□□ -0.35
GGA3-208ENST00000579743 SPPL2CQ8IUH8 684 aa12.86□□□□□ -0.35
GGA3-208ENST00000579743 POGLUT1Q8NBL1 392 aa12.86□□□□□ -0.35
GGA3-208ENST00000579743 C7orf57Q8NEG2 295 aa12.86□□□□□ -0.35
GGA3-208ENST00000579743 GAL3ST3Q96A11 431 aa12.86□□□□□ -0.35
GGA3-208ENST00000579743 CCDC120Q96HB5 630 aa12.86□□□□□ -0.35
GGA3-208ENST00000579743 SIGLEC12Q96PQ1 595 aa12.86□□□□□ -0.35
GGA3-208ENST00000579743 COPS7BQ9H9Q2 264 aaPredicted RBP12.86□□□□□ -0.35
GGA3-208ENST00000579743 MOCS1Q9NZB8 636 aa12.86□□□□□ -0.35
GGA3-208ENST00000579743 GPRC5BQ9NZH0 403 aa12.86□□□□□ -0.35
GGA3-208ENST00000579743 NPIPA1Q9UND3 350 aa12.86□□□□□ -0.35
GGA3-208ENST00000579743 KLF13Q9Y2Y9 288 aaPredicted RBP12.86□□□□□ -0.35
GGA3-208ENST00000579743 TCRBV16S1A1N1A0A5B0 115 aa12.85□□□□□ -0.35
GGA3-208ENST00000579743 ASPDHA6ND91 283 aa12.85□□□□□ -0.35
GGA3-208ENST00000579743 KLRC4-KLRK1H3BQV0 150 aa12.85□□□□□ -0.35
GGA3-208ENST00000579743 ASNA1O43681 348 aa12.85□□□□□ -0.35
GGA3-208ENST00000579743 COX6B1P14854 86 aa12.85□□□□□ -0.35
GGA3-208ENST00000579743 ZNF24P17028 368 aa12.85□□□□□ -0.35
GGA3-208ENST00000579743 HLCSP50747 726 aa12.85□□□□□ -0.35
GGA3-208ENST00000579743 HSD17B7P56937 341 aa12.85□□□□□ -0.35
GGA3-208ENST00000579743 MLF1P58340 268 aa12.85□□□□□ -0.35
GGA3-208ENST00000579743 TAS2R39P59534 338 aa12.85□□□□□ -0.35
GGA3-208ENST00000579743 BTG2P78543 158 aa12.85□□□□□ -0.35
GGA3-208ENST00000579743 PMP22Q01453 160 aa12.85□□□□□ -0.35
GGA3-208ENST00000579743 SLC13A2Q13183 592 aa12.85□□□□□ -0.35
GGA3-208ENST00000579743 TSNQ15631 228 aaKnown RBP12.85□□□□□ -0.35
GGA3-208ENST00000579743 ZXDCQ2QGD7 858 aaPredicted RBP12.85□□□□□ -0.35
GGA3-208ENST00000579743 CDKL4Q5MAI5 379 aa12.85□□□□□ -0.35
GGA3-208ENST00000579743 TRIM40Q6P9F5 258 aa12.85□□□□□ -0.35
GGA3-208ENST00000579743 PNPLA5Q7Z6Z6 429 aaPredicted RBP12.85□□□□□ -0.35
GGA3-208ENST00000579743 GPSM1Q86YR5 675 aa12.85□□□□□ -0.35
GGA3-208ENST00000579743 CREG2Q8IUH2 290 aa12.85□□□□□ -0.35
GGA3-208ENST00000579743 TMEM156Q8N614 296 aa12.85□□□□□ -0.35
GGA3-208ENST00000579743 ANKRD53Q8N9V6 530 aa12.85□□□□□ -0.35
GGA3-208ENST00000579743 SRFBP1Q8NEF9 429 aaKnown RBP12.85□□□□□ -0.35
GGA3-208ENST00000579743 ITLN2Q8WWU7 325 aaPredicted RBP12.85□□□□□ -0.35
GGA3-208ENST00000579743 PWWP2AQ96N64 755 aa12.85□□□□□ -0.35
GGA3-208ENST00000579743 KRT12Q99456 494 aa12.85□□□□□ -0.35
GGA3-208ENST00000579743 TRIM51Q9BSJ1 452 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms