RNA–Protein interactions for RNA: ENST00000577246.5

COPS3-214, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 639 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-214ENST00000577246 NPIPA3F8WFD2 350 aa12.46□□□□□ -0.41
COPS3-214ENST00000577246 CEP104O60308 925 aa12.46□□□□□ -0.41
COPS3-214ENST00000577246 ITGA10O75578 1167 aa12.46□□□□□ -0.41
COPS3-214ENST00000577246 C8GP07360 202 aa12.46□□□□□ -0.41
COPS3-214ENST00000577246 CDH1P12830 882 aa12.46□□□□□ -0.41
COPS3-214ENST00000577246 RNH1P13489 461 aaKnown RBP12.46□□□□□ -0.41
COPS3-214ENST00000577246 RPL22P35268 128 aaKnown RBP12.46□□□□□ -0.41
COPS3-214ENST00000577246 SSR4P51571 173 aa12.46□□□□□ -0.41
COPS3-214ENST00000577246 CCR8P51685 355 aa12.46□□□□□ -0.41
COPS3-214ENST00000577246 DGKQP52824 942 aa12.46□□□□□ -0.41
COPS3-214ENST00000577246 PPIAP62937 165 aaKnown RBP12.46□□□□□ -0.41
COPS3-214ENST00000577246 SNX1Q13596 522 aa12.46□□□□□ -0.41
COPS3-214ENST00000577246 THOC5Q13769 683 aaKnown RBP12.46□□□□□ -0.41
COPS3-214ENST00000577246 EMC4Q5J8M3 183 aa12.46□□□□□ -0.41
COPS3-214ENST00000577246 NDUFAF5Q5TEU4 345 aa12.46□□□□□ -0.41
COPS3-214ENST00000577246 ZNF470Q6ECI4 717 aa12.46□□□□□ -0.41
COPS3-214ENST00000577246 AGTRAPQ6RW13 159 aa12.46□□□□□ -0.41
COPS3-214ENST00000577246 LCTLQ6UWM7 567 aa12.46□□□□□ -0.41
COPS3-214ENST00000577246 CES3Q6UWW8 571 aa12.46□□□□□ -0.41
COPS3-214ENST00000577246 ARSKQ6UWY0 536 aa12.46□□□□□ -0.41
COPS3-214ENST00000577246 GSTA5Q7RTV2 222 aa12.46□□□□□ -0.41
COPS3-214ENST00000577246 STRA8Q7Z7C7 330 aa12.46□□□□□ -0.41
COPS3-214ENST00000577246 PRUNE1Q86TP1 453 aa12.46□□□□□ -0.41
COPS3-214ENST00000577246 BIVMQ86UB2 503 aa12.46□□□□□ -0.41
COPS3-214ENST00000577246 RPRMLQ8N4K4 120 aa12.46□□□□□ -0.41
COPS3-214ENST00000577246 GIMAP7Q8NHV1 300 aa12.46□□□□□ -0.41
COPS3-214ENST00000577246 LRRC46Q96FV0 321 aa12.46□□□□□ -0.41
COPS3-214ENST00000577246 SLC30A3Q99726 388 aa12.46□□□□□ -0.41
COPS3-214ENST00000577246 TTYH2Q9BSA4 534 aa12.46□□□□□ -0.41
COPS3-214ENST00000577246 TRIM5Q9C035 493 aa12.46□□□□□ -0.41
COPS3-214ENST00000577246 DEFB127Q9H1M4 99 aa12.46□□□□□ -0.41
COPS3-214ENST00000577246 TSPY26PQ9H489 355 aa12.46□□□□□ -0.41
COPS3-214ENST00000577246 SAMD15Q9P1V8 674 aa12.46□□□□□ -0.41
COPS3-214ENST00000577246 FBXW2Q9UKT8 454 aa12.46□□□□□ -0.41
COPS3-214ENST00000577246 YARS2Q9Y2Z4 477 aaKnown RBP12.46□□□□□ -0.41
COPS3-214ENST00000577246 A8MVJ9 347 aa12.45□□□□□ -0.42
COPS3-214ENST00000577246 OR1F1O43749 312 aa12.45□□□□□ -0.42
COPS3-214ENST00000577246 LCMT2O60294 686 aaKnown RBP12.45□□□□□ -0.42
COPS3-214ENST00000577246 WDR1O75083 606 aa12.45□□□□□ -0.42
COPS3-214ENST00000577246 AVILO75366 819 aa12.45□□□□□ -0.42
COPS3-214ENST00000577246 SERPIND1P05546 499 aa12.45□□□□□ -0.42
COPS3-214ENST00000577246 ZSCAN5DPP0CG00 497 aa12.45□□□□□ -0.42
COPS3-214ENST00000577246 MAOAP21397 527 aa12.45□□□□□ -0.42
COPS3-214ENST00000577246 KIR2DL3P43628 341 aa12.45□□□□□ -0.42
COPS3-214ENST00000577246 RGS4P49798 205 aa12.45□□□□□ -0.42
COPS3-214ENST00000577246 SP140Q13342 867 aa12.45□□□□□ -0.42
COPS3-214ENST00000577246 BBS9Q3SYG4 887 aa12.45□□□□□ -0.42
COPS3-214ENST00000577246 UGT3A1Q6NUS8 523 aa12.45□□□□□ -0.42
COPS3-214ENST00000577246 ZNF585AQ6P3V2 769 aa12.45□□□□□ -0.42
COPS3-214ENST00000577246 CASC4Q6P4E1 433 aa12.45□□□□□ -0.42
COPS3-214ENST00000577246 CYHR1Q6ZMK1 362 aa12.45□□□□□ -0.42
COPS3-214ENST00000577246 GK5Q6ZS86 529 aa12.45□□□□□ -0.42
COPS3-214ENST00000577246 PIWIL4Q7Z3Z4 852 aaKnown RBP12.45□□□□□ -0.42
COPS3-214ENST00000577246 MDGA2Q7Z553 956 aa12.45□□□□□ -0.42
COPS3-214ENST00000577246 SLC13A5Q86YT5 568 aaPredicted RBP12.45□□□□□ -0.42
COPS3-214ENST00000577246 LMNTD2Q8IXW0 634 aa12.45□□□□□ -0.42
COPS3-214ENST00000577246 APCDD1LQ8NCL9 501 aa12.45□□□□□ -0.42
COPS3-214ENST00000577246 PSD4Q8NDX1 1056 aa12.45□□□□□ -0.42
COPS3-214ENST00000577246 NFAM1Q8NET5 270 aaPredicted RBP12.45□□□□□ -0.42
COPS3-214ENST00000577246 ABHD11Q8NFV4 315 aa12.45□□□□□ -0.42
COPS3-214ENST00000577246 ALKBH8Q96BT7 664 aaKnown RBP12.45□□□□□ -0.42
COPS3-214ENST00000577246 MBD6Q96DN6 1003 aa12.45□□□□□ -0.42
COPS3-214ENST00000577246 VMP1Q96GC9 406 aa12.45□□□□□ -0.42
COPS3-214ENST00000577246 SMC6Q96SB8 1091 aa12.45□□□□□ -0.42
COPS3-214ENST00000577246 SGPP1Q9BX95 441 aa12.45□□□□□ -0.42
COPS3-214ENST00000577246 ZDHHC11Q9H8X9 412 aa12.45□□□□□ -0.42
COPS3-214ENST00000577246 DLL4Q9NR61 685 aa12.45□□□□□ -0.42
COPS3-214ENST00000577246 RASSF1Q9NS23 344 aa12.45□□□□□ -0.42
COPS3-214ENST00000577246 PNPLA3Q9NST1 481 aa12.45□□□□□ -0.42
COPS3-214ENST00000577246 HPF1Q9NWY4 346 aa12.45□□□□□ -0.42
COPS3-214ENST00000577246 KCMF1Q9P0J7 381 aa12.45□□□□□ -0.42
COPS3-214ENST00000577246 B4GALT7Q9UBV7 327 aa12.45□□□□□ -0.42
COPS3-214ENST00000577246 REXO2Q9Y3B8 237 aaKnown RBP12.45□□□□□ -0.42
COPS3-214ENST00000577246 MMACHCQ9Y4U1 282 aa12.45□□□□□ -0.42
COPS3-214ENST00000577246 NIPBLQ6KC79 2804 aaeCLIP12.45□□□□□ -0.42
COPS3-214ENST00000577246 ANKHD1Q8IWZ3 2542 aaKnown RBP12.44□□□□□ -0.42
COPS3-214ENST00000577246 IGKV3D-11A0A0A0MRZ8 115 aa12.44□□□□□ -0.42
COPS3-214ENST00000577246 TRBC2A0A5B9 178 aa12.44□□□□□ -0.42
COPS3-214ENST00000577246 MAGEB16A2A368 324 aa12.44□□□□□ -0.42
COPS3-214ENST00000577246 MYO1DO94832 1006 aa12.44□□□□□ -0.42
COPS3-214ENST00000577246 HIST1H2AGP0C0S8 130 aaPredicted RBP12.44□□□□□ -0.42
COPS3-214ENST00000577246 ZNF888P0CJ79 500 aaPredicted RBP12.44□□□□□ -0.42
COPS3-214ENST00000577246 TPSB2P20231 275 aa12.44□□□□□ -0.42
COPS3-214ENST00000577246 HIST1H2ADP20671 130 aa12.44□□□□□ -0.42
COPS3-214ENST00000577246 OLR1P78380 273 aa12.44□□□□□ -0.42
COPS3-214ENST00000577246 BTG2P78543 158 aa12.44□□□□□ -0.42
COPS3-214ENST00000577246 NAE1Q13564 534 aa12.44□□□□□ -0.42
COPS3-214ENST00000577246 DHX34Q14147 1143 aaKnown RBP12.44□□□□□ -0.42
COPS3-214ENST00000577246 TPSAB1Q15661 275 aa12.44□□□□□ -0.42
COPS3-214ENST00000577246 CCNG2Q16589 344 aa12.44□□□□□ -0.42
COPS3-214ENST00000577246 PHKG1Q16816 387 aa12.44□□□□□ -0.42
COPS3-214ENST00000577246 DRICH1Q6PGQ1 229 aaPredicted RBP12.44□□□□□ -0.42
COPS3-214ENST00000577246 TAOK1Q7L7X3 1001 aa12.44□□□□□ -0.42
COPS3-214ENST00000577246 ZZZ3Q8IYH5 903 aa12.44□□□□□ -0.42
COPS3-214ENST00000577246 CPNE9Q8IYJ1 553 aa12.44□□□□□ -0.42
COPS3-214ENST00000577246 RNF214Q8ND24 703 aa12.44□□□□□ -0.42
COPS3-214ENST00000577246 ACRBPQ8NEB7 543 aa12.44□□□□□ -0.42
COPS3-214ENST00000577246 OR2M7Q8NG81 312 aa12.44□□□□□ -0.42
COPS3-214ENST00000577246 OR5M9Q8NGP3 310 aa12.44□□□□□ -0.42
COPS3-214ENST00000577246 NT5CQ8TCD5 201 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms